JWS
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | doub | 1.33Å | 1.37Å | Aromatic |
N1 | C15 | sing | 1.33Å | 1.38Å | Aromatic |
C2 | N3 | sing | 1.38Å | 1.35Å | |
C2 | N4 | sing | 1.33Å | 1.38Å | Aromatic |
N4 | C5 | doub | 1.33Å | 1.38Å | Aromatic |
C5 | C6 | sing | 1.48Å | 1.50Å | Aromatic |
C5 | N14 | sing | 1.33Å | 1.38Å | Aromatic |
C6 | C7 | doub | 1.40Å | 1.46Å | Aromatic |
C6 | C13 | sing | 1.39Å | 1.44Å | Aromatic |
C7 | O8 | sing | 1.36Å | 1.37Å | |
C7 | C9 | sing | 1.39Å | 1.44Å | Aromatic |
C9 | C10 | doub | 1.38Å | 1.45Å | Aromatic |
C10 | C11 | sing | 1.39Å | 1.47Å | Aromatic |
C11 | O12 | sing | 1.36Å | 1.31Å | |
C11 | C13 | doub | 1.38Å | 1.46Å | Aromatic |
O12 | C17 | sing | 1.43Å | 1.45Å | |
N14 | C15 | doub | 1.33Å | 1.37Å | Aromatic |
C15 | N16 | sing | 1.38Å | 1.34Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
N3 | HN3A | sing | 0.97Å | 1.00Å | |
O8 | HO8 | sing | 0.97Å | 0.95Å | |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C13 | H13 | sing | 1.08Å | 1.08Å | |
N16 | HN16 | sing | 0.97Å | 1.00Å | |
N16 | HN1A | sing | 0.97Å | 1.00Å | |
C17 | H17 | sing | 1.09Å | 1.10Å | |
C17 | H17A | sing | 1.09Å | 1.10Å | |
C17 | H17B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C15 | 120.2° | 120.0° |
N1 | C2 | N3 | 120.6° | 119.9° |
N1 | C2 | N4 | 119.8° | 120.1° |
N1 | C15 | N14 | 119.5° | 120.0° |
N1 | C15 | N16 | 121.0° | 120.0° |
N3 | C2 | N4 | 119.6° | 120.0° |
C2 | N3 | HN3 | 109.5° | 120.0° |
C2 | N3 | HN3A | 109.4° | 120.0° |
C2 | N4 | C5 | 120.5° | 120.0° |
N4 | C5 | C6 | 120.0° | 120.0° |
N4 | C5 | N14 | 119.0° | 119.9° |
C6 | C5 | N14 | 121.0° | 120.1° |
C5 | C6 | C7 | 122.4° | 120.2° |
C5 | C6 | C13 | 118.2° | 120.1° |
C5 | N14 | C15 | 121.1° | 120.0° |
C7 | C6 | C13 | 119.4° | 119.7° |
C6 | C7 | O8 | 119.5° | 120.1° |
C6 | C7 | C9 | 119.5° | 119.9° |
C6 | C13 | C11 | 122.7° | 119.9° |
C6 | C13 | H13 | 118.7° | 120.1° |
O8 | C7 | C9 | 120.9° | 120.1° |
C7 | O8 | HO8 | 109.5° | 114.0° |
C7 | C9 | C10 | 120.5° | 120.1° |
C7 | C9 | H9 | 119.7° | 120.0° |
C9 | C10 | C11 | 121.5° | 120.3° |
C10 | C9 | H9 | 119.8° | 119.9° |
C9 | C10 | H10 | 119.2° | 119.9° |
C10 | C11 | O12 | 118.4° | 120.0° |
C10 | C11 | C13 | 116.3° | 120.1° |
C11 | C10 | H10 | 119.2° | 119.8° |
O12 | C11 | C13 | 125.3° | 119.9° |
C11 | O12 | C17 | 124.0° | 117.0° |
C11 | C13 | H13 | 118.7° | 120.1° |
O12 | C17 | H17 | 109.5° | 109.4° |
O12 | C17 | H17A | 109.5° | 109.5° |
O12 | C17 | H17B | 109.5° | 109.4° |
N14 | C15 | N16 | 119.5° | 120.1° |
C15 | N16 | HN16 | 109.5° | 120.1° |
C15 | N16 | HN1A | 109.5° | 120.0° |
HN3 | N3 | HN3A | 109.4° | 120.0° |
HN16 | N16 | HN1A | 109.5° | 120.0° |
H17 | C17 | H17A | 109.4° | 109.5° |
H17 | C17 | H17B | 109.5° | 109.5° |
H17A | C17 | H17B | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | N3 | N4 | 179.8° | 179.9° |
N1 | C2 | N4 | C5 | 0.2° | 0.0° |
C2 | N1 | C15 | N14 | 0.2° | 0.0° |
C2 | N1 | C15 | N16 | 179.8° | 180.0° |
N1 | C2 | N3 | HN3 | 0.0° | 0.0° |
N1 | C2 | N3 | HN3A | 120.0° | 180.0° |
C15 | N1 | C2 | N3 | 179.8° | 179.9° |
C15 | N1 | C2 | N4 | 0.0° | 0.0° |
N1 | C15 | N14 | C5 | 0.3° | 0.0° |
N1 | C15 | N14 | N16 | 180.0° | 180.0° |
N1 | C15 | N16 | HN16 | 0.0° | 0.0° |
N1 | C15 | N16 | HN1A | 120.0° | 180.0° |
N3 | C2 | N4 | C5 | 179.6° | 179.9° |
C2 | N3 | HN3 | HN3A | 120.0° | 179.9° |
C2 | N4 | C5 | C6 | 179.5° | 180.0° |
C2 | N4 | C5 | N14 | 0.1° | 0.0° |
N4 | C2 | N3 | HN3 | 179.8° | 180.0° |
N4 | C2 | N3 | HN3A | 59.9° | 0.1° |
N4 | C5 | C6 | N14 | 179.6° | 180.0° |
N4 | C5 | C6 | C7 | 179.2° | 0.0° |
N4 | C5 | C6 | C13 | 0.6° | 179.8° |
N4 | C5 | N14 | C15 | 0.1° | 0.0° |
C5 | C6 | C7 | C13 | 179.8° | 179.8° |
C5 | C6 | C7 | O8 | 0.3° | 0.0° |
C5 | C6 | C7 | C9 | 179.5° | 180.0° |
C5 | C6 | C13 | C11 | 179.8° | 179.7° |
C6 | C5 | N14 | C15 | 179.7° | 180.0° |
C5 | C6 | C13 | H13 | 0.2° | 0.1° |
N14 | C5 | C6 | C7 | 0.4° | 180.0° |
N14 | C5 | C6 | C13 | 179.8° | 0.2° |
C5 | N14 | C15 | N16 | 179.8° | 180.0° |
C6 | C7 | O8 | C9 | 179.8° | 180.0° |
C6 | C7 | C9 | C10 | 0.3° | 0.0° |
C7 | C6 | C13 | C11 | 0.0° | 0.5° |
C6 | C7 | O8 | HO8 | 180.0° | 90.0° |
C6 | C7 | C9 | H9 | 179.7° | 180.0° |
C7 | C6 | C13 | H13 | 180.0° | 179.7° |
C13 | C6 | C7 | O8 | 179.9° | 179.8° |
C13 | C6 | C7 | C9 | 0.3° | 0.2° |
C6 | C13 | C11 | C10 | 0.3° | 0.5° |
C6 | C13 | C11 | O12 | 179.7° | 179.7° |
C6 | C13 | C11 | H13 | 180.0° | 179.8° |
O8 | C7 | C9 | C10 | 179.9° | 179.9° |
O8 | C7 | C9 | H9 | 0.1° | 0.0° |
C7 | C9 | C10 | H9 | 180.0° | 179.9° |
C7 | C9 | C10 | C11 | 0.0° | 0.0° |
C9 | C7 | O8 | HO8 | 0.2° | 90.0° |
C7 | C9 | C10 | H10 | 180.0° | 180.0° |
C9 | C10 | C11 | H10 | 180.0° | 180.0° |
C9 | C10 | C11 | O12 | 179.6° | 180.0° |
C9 | C10 | C11 | C13 | 0.3° | 0.2° |
C10 | C11 | O12 | C13 | 180.0° | 179.8° |
C10 | C11 | O12 | C17 | 0.0° | 0.1° |
C11 | C10 | C9 | H9 | 180.0° | 180.0° |
C10 | C11 | C13 | H13 | 179.7° | 179.7° |
O12 | C11 | C10 | H10 | 0.4° | 0.0° |
O12 | C11 | C13 | H13 | 0.4° | 0.1° |
C11 | O12 | C17 | H17 | 180.0° | 60.0° |
C11 | O12 | C17 | H17A | 60.0° | 60.0° |
C11 | O12 | C17 | H17B | 60.0° | 180.0° |
C13 | C11 | O12 | C17 | 179.9° | 179.7° |
C13 | C11 | C10 | H10 | 179.7° | 179.7° |
O12 | C17 | H17 | H17A | 120.0° | 120.0° |
O12 | C17 | H17 | H17B | 120.0° | 120.0° |
O12 | C17 | H17A | H17B | 120.0° | 120.0° |
N14 | C15 | N16 | HN16 | 180.0° | 180.0° |
N14 | C15 | N16 | HN1A | 60.0° | 0.1° |
C15 | N16 | HN16 | HN1A | 120.0° | 179.9° |
H9 | C9 | C10 | H10 | 0.0° | 0.1° |
H17 | C17 | H17A | H17B | 120.0° | 120.0° |