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JSR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1sing1.43Å1.44Å
C2C1sing1.53Å1.53Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
O1C3'sing1.43Å1.43Å
C2N2sing1.47Å1.46Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
N2C3sing1.47Å1.46Å
N2HN2sing1.01Å1.00Å
C3C4sing1.53Å1.53Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C4C11sing1.51Å1.52Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C5'N1'sing1.48Å1.45Å
C2'N1'sing1.48Å1.44Å
N1'HN1'sing1.01Å1.00Å
C11C12doub1.38Å1.40ÅAromatic
C11C16sing1.38Å1.40ÅAromatic
C12C13sing1.39Å1.40ÅAromatic
C12H12sing1.08Å1.08Å
C13F13sing1.35Å1.35Å
C13C14doub1.38Å1.40ÅAromatic
C15C14sing1.38Å1.40ÅAromatic
C14H14sing1.08Å1.08Å
C16C15doub1.38Å1.40ÅAromatic
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
C6AN1Adoub1.32Å1.36ÅAromatic
C2AN1Asing1.32Å1.36ÅAromatic
C3'C2'sing1.54Å1.51Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C3AC2Adoub1.38Å1.41ÅAromatic
C2AC7Asing1.51Å1.54Å
C4'C3'sing1.55Å1.53Å
C3'H3'sing1.09Å1.10Å
C4AC3Asing1.39Å1.41ÅAromatic
C3AH3AAsing1.08Å1.08Å
C7AC4'sing1.53Å1.53Å
C4'C5'sing1.55Å1.52Å
C4'H4'sing1.09Å1.10Å
C8AC4Asing1.51Å1.52Å
C4AC5Adoub1.38Å1.39ÅAromatic
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C5AC6Asing1.39Å1.39ÅAromatic
C5AH5Asing1.08Å1.08Å
C6AN6Asing1.39Å1.35Å
N6AHN6Asing0.97Å1.00Å
N6AHN6Bsing0.97Å1.00Å
C7AH7Asing1.09Å1.10Å
C7AH7AAsing1.09Å1.10Å
C8AH8Asing1.09Å1.10Å
C8AH8AAsing1.09Å1.10Å
C8AH8ABsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2107.9°109.5°
O1C1H1110.0°109.5°
O1C1H1A110.0°109.5°
C1O1C3'118.3°114.0°
C2C1H1110.0°109.4°
C2C1H1A110.0°109.5°
C1C2N2114.6°109.5°
C1C2H2107.8°109.5°
C1C2H2A107.8°109.5°
H1C1H1A109.0°109.5°
O1C3'C2'108.5°110.3°
O1C3'C4'109.9°110.3°
O1C3'H3'109.1°110.3°
N2C2H2107.8°109.5°
N2C2H2A107.8°109.4°
C2N2C3119.0°111.0°
C2N2HN2106.4°111.0°
H2C2H2A111.1°109.5°
C3N2HN2106.4°111.0°
N2C3C4117.1°109.5°
N2C3H3107.0°109.5°
N2C3H3A107.0°109.5°
C4C3H3107.0°109.4°
C4C3H3A107.0°109.5°
C3C4C11110.7°109.4°
C3C4H4109.1°109.4°
C3C4H4A109.0°109.5°
H3C3H3A111.8°109.5°
C11C4H4109.1°109.4°
C11C4H4A109.0°109.5°
C4C11C12120.6°120.0°
C4C11C16120.1°120.0°
H4C4H4A109.9°109.6°
C5'N1'C2'114.6°105.8°
C5'N1'HN1'107.8°111.0°
N1'C5'C4'104.4°103.2°
N1'C5'H5'111.2°110.7°
N1'C5'H5'A111.2°110.7°
C2'N1'HN1'107.8°111.0°
N1'C2'C3'101.4°107.1°
N1'C2'H2'112.3°109.9°
N1'C2'H2'A112.3°109.9°
C12C11C16119.3°120.0°
C11C12C13120.7°120.0°
C11C12H12119.7°120.0°
C11C16C15119.8°120.1°
C11C16H16120.1°120.0°
C13C12H12119.6°120.0°
C12C13F13119.4°120.0°
C12C13C14119.9°120.0°
F13C13C14120.7°120.1°
C13C14C15119.4°120.0°
C13C14H14120.3°120.0°
C15C14H14120.3°120.0°
C14C15C16120.9°120.0°
C14C15H15119.6°120.0°
C16C15H15119.5°120.0°
C15C16H16120.1°120.0°
C6AN1AC2A121.6°121.6°
N1AC6AC5A121.6°120.6°
N1AC6AN6A119.4°119.7°
N1AC2AC3A118.3°120.9°
N1AC2AC7A116.0°119.6°
C3'C2'H2'112.3°110.0°
C3'C2'H2'A112.3°110.1°
C2'C3'C4'107.0°105.2°
C2'C3'H3'111.9°110.3°
H2'C2'H2'A106.5°109.9°
C3AC2AC7A125.7°119.5°
C2AC3AC4A120.7°119.3°
C2AC3AH3AA119.6°120.4°
C2AC7AC4'120.2°109.5°
C2AC7AH7A106.0°109.5°
C2AC7AH7AA106.1°109.5°
C4'C3'H3'110.5°110.3°
C3'C4'C7A113.8°110.8°
C3'C4'C5'105.1°102.9°
C3'C4'H4'109.5°110.7°
C4AC3AH3AA119.6°120.3°
C3AC4AC8A122.8°120.7°
C3AC4AC5A118.7°118.5°
C7AC4'C5'109.5°110.7°
C7AC4'H4'105.2°110.8°
C4'C7AH7A106.1°109.4°
C4'C7AH7AA106.0°109.4°
C5'C4'H4'114.0°110.7°
C4'C5'H5'111.2°110.7°
C4'C5'H5'A111.2°110.6°
C8AC4AC5A118.5°120.8°
C4AC8AH8A109.5°109.5°
C4AC8AH8AA109.5°109.5°
C4AC8AH8AB109.5°109.5°
C4AC5AC6A119.1°119.1°
C4AC5AH5A120.5°120.5°
H5'C5'H5'A107.7°110.7°
C6AC5AH5A120.5°120.5°
C5AC6AN6A119.0°119.7°
C6AN6AHN6A109.5°120.0°
C6AN6AHN6B109.5°120.0°
HN6AN6AHN6B109.4°120.0°
H7AC7AH7AA112.7°109.5°
H8AC8AH8AA109.5°109.4°
H8AC8AH8AB109.5°109.4°
H8AAC8AH8AB109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2H1120.0°120.0°
O1C1C2H1A120.0°120.0°
O1C1H1H1A120.7°120.0°
O1C1C2N2102.6°65.0°
O1C1C2H217.4°175.0°
O1C1C2H2A137.3°55.0°
C1O1C3'C2'50.8°91.4°
C1O1C3'C4'167.5°152.8°
C1O1C3'H3'71.2°30.7°
C2C1H1H1A120.6°120.0°
C2C1O1C3'146.4°180.0°
C1C2N2H2120.0°120.0°
C1C2N2H2A120.0°120.0°
C1C2H2H2A117.9°120.0°
C1C2N2C3165.2°180.0°
C1C2N2HN245.2°56.0°
H1C1O1C3'93.6°60.0°
H1C1C2N2137.4°55.0°
H1C1C2H2102.6°65.0°
H1C1C2H2A17.3°175.0°
H1AC1O1C3'26.5°60.0°
H1AC1C2N217.4°175.0°
H1AC1C2H2137.4°55.0°
H1AC1C2H2A102.7°65.0°
O1C3'C2'N1'91.4°117.7°
O1C3'C2'C4'118.6°118.9°
O1C3'C2'H3'120.3°122.1°
O1C3'C2'H2'148.6°123.0°
O1C3'C2'H2'A28.7°1.7°
O1C3'C4'H3'120.4°122.1°
O1C3'C4'C7A144.8°100.7°
O1C3'C4'C5'95.5°140.9°
O1C3'C4'H4'27.3°22.5°
N2C2H2H2A117.9°120.0°
C2N2C3HN2120.0°124.0°
C2N2C3C4162.3°180.0°
C2N2C3H342.3°60.0°
C2N2C3H3A77.7°60.0°
H2C2N2C374.8°60.0°
H2C2N2HN2165.2°176.1°
H2AC2N2C345.2°60.0°
H2AC2N2HN274.8°63.9°
N2C3C4H3120.0°120.0°
N2C3C4H3A120.0°120.1°
N2C3H3H3A116.8°120.0°
N2C3C4C1168.5°180.0°
N2C3C4H451.5°60.1°
N2C3C4H4A171.5°60.0°
HN2N2C3C477.7°56.1°
HN2N2C3H3162.3°176.0°
HN2N2C3H3A42.4°64.0°
C4C3H3H3A116.9°120.0°
C3C4C11H4120.0°119.9°
C3C4C11H4A120.0°120.0°
C3C4H4H4A119.5°120.0°
C3C4C11C1243.2°90.0°
C3C4C11C16136.8°90.3°
H3C3C4C11171.5°60.0°
H3C3C4H468.5°180.0°
H3C3C4H4A51.5°59.9°
H3AC3C4C1151.5°59.9°
H3AC3C4H4171.5°60.0°
H3AC3C4H4A68.5°179.9°
C11C4H4H4A119.5°120.0°
C4C11C12C16180.0°179.7°
C4C11C12C13179.2°180.0°
C4C11C12H120.8°0.0°
C4C11C16C15179.4°179.8°
C4C11C16H160.6°0.0°
H4C4C11C12163.2°30.0°
H4C4C11C1616.8°149.8°
H4AC4C11C1276.8°150.0°
H4AC4C11C16103.2°29.7°
C5'N1'C2'HN1'120.0°120.5°
C5'N1'C2'C3'23.8°25.4°
C5'N1'C2'H2'96.2°94.0°
C5'N1'C2'H2'A143.8°144.9°
N1'C5'C4'C3'7.7°37.4°
N1'C5'C4'C7A114.9°155.8°
N1'C5'C4'H5'120.0°118.4°
N1'C5'C4'H5'A120.0°118.5°
N1'C5'C4'H4'127.6°81.0°
N1'C5'H5'H5'A122.0°123.1°
N1'C2'C3'H2'120.0°119.4°
N1'C2'C3'H2'A120.0°119.4°
N1'C2'H2'H2'A123.3°121.1°
N1'C2'C3'C4'27.2°1.3°
N1'C2'C3'H3'148.3°120.2°
C2'N1'C5'C4'10.5°39.2°
C2'N1'C5'H5'130.5°157.6°
C2'N1'C5'H5'A109.5°79.2°
HN1'N1'C2'C3'143.8°145.9°
HN1'N1'C2'H2'23.8°26.5°
HN1'N1'C2'H2'A96.2°94.6°
HN1'N1'C5'C4'130.5°159.7°
HN1'N1'C5'H5'109.5°81.9°
HN1'N1'C5'H5'A10.5°41.2°
C11C12C13H12180.0°180.0°
C11C12C13F13179.0°180.0°
C11C12C13C140.5°0.0°
C12C11C16C150.6°0.5°
C12C11C16H16179.4°179.7°
C16C11C12C130.8°0.2°
C16C11C12H12179.2°179.8°
C11C16C15C140.2°0.5°
C11C16C15H16180.0°179.8°
C11C16C15H15179.9°179.8°
C12C13F13C14179.6°180.0°
C12C13C14C150.1°0.1°
C12C13C14H14179.9°180.0°
H12C12C13F131.0°0.0°
H12C12C13C14179.4°180.0°
F13C13C14C15179.4°180.0°
F13C13C14H140.6°0.1°
C13C14C15H14180.0°179.9°
C13C14C15C160.1°0.3°
C13C14C15H15179.9°180.0°
C14C15C16H15180.0°179.6°
C14C15C16H16179.8°179.7°
H14C14C15C16179.9°179.8°
H14C14C15H150.1°0.1°
H15C15C16H160.1°0.0°
C6AN1AC2AC3A0.6°0.0°
C6AN1AC2AC7A178.3°180.0°
N1AC6AC5AC4A1.0°0.0°
N1AC6AC5AN6A179.8°180.0°
N1AC6AC5AH5A179.1°180.0°
N1AC6AN6AHN6A0.0°180.0°
N1AC6AN6AHN6B120.0°0.1°
N1AC2AC3AC7A178.8°179.9°
N1AC2AC3AC4A0.7°0.0°
N1AC2AC3AH3AA179.3°180.0°
N1AC2AC7AC4'163.7°55.1°
C2AN1AC6AC5A0.8°0.0°
C2AN1AC6AN6A179.5°180.0°
N1AC2AC7AH7A76.3°64.9°
N1AC2AC7AH7AA43.7°175.0°
C3'C2'H2'H2'A123.3°121.3°
C2'C3'C4'H3'122.0°118.9°
C2'C3'C4'C7A97.6°140.3°
C2'C3'C4'C5'22.1°21.9°
C2'C3'C4'H4'145.0°96.4°
H2'C2'C3'C4'92.8°118.1°
H2'C2'C3'H3'28.3°0.9°
H2'AC2'C3'C4'147.2°120.7°
H2'AC2'C3'H3'91.7°120.4°
C2AC3AC4AH3AA180.0°180.0°
C3AC2AC7AC4'17.5°125.0°
C2AC3AC4AC8A179.7°180.0°
C2AC3AC4AC5A0.9°0.0°
C3AC2AC7AH7A102.5°115.0°
C3AC2AC7AH7AA137.5°5.0°
C2AC7AC4'C3'164.9°175.0°
C7AC2AC3AC4A178.1°180.0°
C7AC2AC3AH3AA1.9°0.0°
C2AC7AC4'H7A120.0°120.0°
C2AC7AC4'H7AA120.0°120.0°
C2AC7AC4'C5'77.9°71.5°
C2AC7AC4'H4'45.0°51.7°
C2AC7AH7AH7AA115.6°120.1°
C3'C4'C7AC5'117.2°113.5°
C3'C4'C7AH4'119.9°123.3°
C3'C4'C5'H4'119.9°118.4°
C3'C4'C5'H5'112.3°155.8°
C3'C4'C5'H5'A127.7°81.1°
C3'C4'C7AH7A44.9°55.0°
C3'C4'C7AH7AA75.1°65.0°
H3'C3'C4'C7A24.4°21.4°
H3'C3'C4'C5'144.1°97.0°
H3'C3'C4'H4'93.1°144.6°
C3AC4AC8AC5A179.3°179.9°
C3AC4AC5AC6A1.0°0.1°
C3AC4AC5AH5A179.0°180.0°
C3AC4AC8AH8A89.6°90.0°
C3AC4AC8AH8AA150.3°150.0°
C3AC4AC8AH8AB30.4°30.0°
H3AAC3AC4AC8A0.2°0.1°
H3AAC3AC4AC5A179.1°180.0°
C7AC4'C5'H4'117.5°123.2°
C7AC4'C5'H5'125.1°85.8°
C7AC4'C5'H5'A5.0°37.3°
C4'C7AH7AH7AA115.6°120.0°
C4'C5'H5'H5'A122.1°123.0°
C5'C4'C7AH7A162.2°168.5°
C5'C4'C7AH7AA42.2°48.5°
H4'C4'C5'H5'7.6°37.5°
H4'C4'C5'H5'A112.4°160.6°
H4'C4'C7AH7A75.0°68.3°
H4'C4'C7AH7AA165.0°171.7°
C8AC4AC5AC6A179.6°180.0°
C8AC4AC5AH5A0.4°0.0°
C4AC8AH8AH8AA120.0°120.0°
C4AC8AH8AH8AB120.0°120.1°
C4AC8AH8AAH8AB120.0°120.1°
C4AC5AC6AH5A180.0°180.0°
C4AC5AC6AN6A179.3°180.0°
C5AC4AC8AH8A89.7°90.1°
C5AC4AC8AH8AA30.3°29.9°
C5AC4AC8AH8AB150.3°149.9°
C5AC6AN6AHN6A179.8°0.1°
C5AC6AN6AHN6B60.2°180.0°
H5AC5AC6AN6A0.7°0.0°
C6AN6AHN6AHN6B120.0°179.9°
H8AC8AH8AAH8AB120.0°119.9°

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PDB entries from 2024-07-17

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