Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

JRD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8sing1.51Å1.50Å
C7C8sing1.41Å1.40ÅAromatic
C7C6doub1.35Å1.34ÅAromatic
C8N1doub1.30Å1.35ÅAromatic
C6C5sing1.51Å1.49Å
C6O1sing1.34Å1.35ÅAromatic
N1O1sing1.21Å1.42ÅAromatic
C5Nsing1.47Å1.46Å
C1C2sing1.53Å1.51Å
C1Csing1.51Å1.51Å
CNsing1.35Å1.41Å
COdoub1.21Å1.22Å
NC10sing1.39Å1.39Å
N2C10doub1.30Å1.30ÅAromatic
N2C11sing1.33Å1.38ÅAromatic
C10S1sing1.76Å1.74ÅAromatic
C13C14doub1.38Å1.38ÅAromatic
C13C12sing1.39Å1.40ÅAromatic
C14C15sing1.38Å1.38ÅAromatic
C11C12sing1.48Å1.47Å
C11C18doub1.35Å1.36ÅAromatic
C12C17doub1.39Å1.39ÅAromatic
C15C16doub1.38Å1.38ÅAromatic
S1C18sing1.76Å1.72ÅAromatic
C17C16sing1.38Å1.38ÅAromatic
C1Hsing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C5H10sing1.09Å1.10Å
C5H9sing1.09Å1.10Å
C9H13sing1.09Å1.10Å
C9H12sing1.09Å1.10Å
C9H14sing1.09Å1.10Å
C7H11sing1.08Å1.08Å
C18H20sing1.08Å1.08Å
C17H19sing1.08Å1.08Å
C16H18sing1.08Å1.08Å
C15H17sing1.08Å1.08Å
C14H16sing1.08Å1.08Å
C13H15sing1.08Å1.08Å
C2H3sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C9C8C7128.6°126.8°
C9C8N1122.1°126.8°
C8C9H13109.5°109.5°
C8C9H12109.5°109.4°
C8C9H14109.4°109.5°
C8C7C6107.0°103.9°
C7C8N1109.3°106.4°
C8C7H11126.5°128.0°
C7C6C5130.8°126.7°
C7C6O1109.8°106.5°
C6C7H11126.5°128.1°
C8N1O1105.6°111.6°
C5C6O1119.4°126.8°
C6C5N113.3°109.5°
C6C5H10108.5°109.5°
C6C5H9108.5°109.4°
C6O1N1108.3°111.6°
C5NC117.4°120.0°
C5NC10117.8°120.0°
NC5H10108.5°109.5°
NC5H9108.5°109.5°
C2C1C112.5°109.4°
C2C1H108.7°109.5°
C2C1H1108.7°109.5°
C1C2H2109.5°109.5°
C1C2H4109.5°109.5°
C1C2H3109.5°109.5°
C1CN119.0°119.9°
C1CO121.3°120.0°
CC1H108.7°109.5°
CC1H1108.7°109.5°
NCO119.6°120.0°
CNC10122.4°120.1°
NC10N2120.6°125.3°
NC10S1123.3°125.4°
C10N2C11110.6°117.0°
N2C10S1115.6°109.4°
N2C11C12117.9°122.3°
N2C11C18114.5°115.4°
C10S1C1887.7°90.0°
C14C13C12120.5°119.9°
C13C14C15120.3°120.1°
C13C14H16119.8°119.9°
C14C13H15119.7°120.1°
C13C12C11120.4°120.1°
C13C12C17118.5°119.8°
C12C13H15119.8°120.1°
C14C15C16119.8°120.3°
C14C15H17120.1°119.9°
C15C14H16119.8°120.0°
C12C11C18127.4°122.3°
C11C12C17120.6°120.1°
C11C18S1111.5°108.2°
C11C18H20124.3°125.9°
C12C17C16120.4°119.9°
C12C17H19119.8°120.1°
C15C16C17120.4°120.1°
C15C16H18119.8°119.9°
C16C15H17120.1°119.9°
S1C18H20124.3°125.9°
C16C17H19119.8°120.1°
C17C16H18119.8°119.9°
HC1H1109.5°109.5°
H2C2H4109.5°109.5°
H2C2H3109.4°109.5°
H4C2H3109.5°109.5°
H10C5H9109.5°109.5°
H13C9H12109.5°109.5°
H13C9H14109.4°109.5°
H12C9H14109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C9C8C7N1178.2°179.7°
C9C8C7C6177.3°179.9°
C9C8N1O1178.0°179.9°
C8C9H13H12120.0°120.0°
C8C9H13H14120.0°120.1°
C8C9H12H14120.0°120.0°
C9C8C7H112.6°0.3°
C8C7C6H11180.0°179.7°
C8C7C6C5176.2°179.9°
C8C7C6O11.1°0.4°
C7C8N1O10.3°0.2°
C7C8C9H13178.0°89.7°
C7C8C9H1262.0°30.3°
C7C8C9H1458.0°150.3°
C6C7C8N10.9°0.4°
C7C6C5O1177.1°179.7°
C7C6O1N10.9°0.3°
C7C6C5N73.2°89.7°
C7C6C5H1047.4°30.3°
C7C6C5H9166.3°150.3°
C8N1O1C60.3°0.0°
N1C8C9H130.0°90.0°
N1C8C9H12120.0°150.0°
N1C8C9H14120.0°30.1°
N1C8C7H11179.2°180.0°
C5C6O1N1176.8°180.0°
C6C5NH10120.6°120.0°
C6C5NH9120.5°120.0°
C6C5NC134.5°90.0°
C6C5NC1062.3°90.0°
C6C5H10H9118.3°120.0°
C5C6C7H113.7°0.2°
O1C6C5N103.9°90.0°
O1C6C5H10135.5°150.1°
O1C6C5H916.7°30.0°
O1C6C7H11179.0°179.9°
C5NCC137.4°179.7°
C5NCC10162.4°180.0°
C5NCO140.7°0.0°
C5NC10N27.0°179.7°
C5NC10S1179.2°0.0°
NC5H10H9118.3°120.0°
C2C1CH120.4°120.0°
C2C1CH1120.5°120.0°
C2C1CN169.0°180.0°
C2C1CO12.9°0.3°
C2C1HH1118.6°120.0°
C1C2H2H4120.0°120.0°
C1C2H2H3120.0°120.0°
C1C2H4H3120.0°120.0°
C1CNO178.1°179.7°
C1CNC10160.3°0.3°
CC1HH1118.6°120.0°
CC1C2H2180.0°60.0°
CC1C2H460.0°60.0°
CC1C2H360.0°180.0°
CNC10N2169.3°0.3°
CNC10S118.5°180.0°
NCC1H70.6°60.0°
NCC1H148.5°60.0°
CNC5H1013.9°150.0°
CNC5H9105.0°30.0°
OCNC1021.6°180.0°
OCC1H107.5°119.7°
OCC1H1133.4°120.2°
NC10N2S1172.8°179.7°
NC10N2C11170.1°179.7°
NC10S1C18170.8°180.0°
C10NC5H10177.1°30.0°
C10NC5H958.2°150.0°
C10N2C11C12172.9°179.8°
C10N2C11C182.5°0.6°
N2C10S1C181.8°0.3°
C11N2C10S12.7°0.5°
N2C11C12C1329.1°179.9°
N2C11C12C18174.8°179.6°
N2C11C12C17142.7°0.3°
N2C11C18S11.2°0.3°
N2C11C18H20178.8°179.8°
C10S1C18C110.3°0.0°
C10S1C18H20179.7°179.9°
C14C13C12H15180.0°179.5°
C13C14C15H16180.0°179.8°
C14C13C12C11171.0°179.8°
C14C13C12C170.9°0.4°
C13C14C15C160.5°0.2°
C13C14C15H17179.5°179.8°
C12C13C14C151.2°0.5°
C13C12C11C17171.7°179.8°
C13C12C11C18156.1°0.3°
C13C12C17C163.6°0.2°
C13C12C17H19176.4°179.7°
C12C13C14H16178.8°179.7°
C14C15C16H17180.0°179.9°
C14C15C16C172.2°0.1°
C14C15C16H18177.8°180.0°
C15C14C13H15178.8°180.0°
C12C11C18S1173.8°180.0°
C11C12C17C16168.3°179.9°
C12C11C18H206.2°0.1°
C11C12C17H1911.7°0.1°
C11C12C13H158.9°0.3°
C18C11C12C1732.1°179.9°
C11C18S1H20180.0°179.9°
C12C17C16C154.3°0.1°
C12C17C16H19180.0°179.9°
C12C17C16H18175.7°180.0°
C17C12C13H15179.1°180.0°
C15C16C17H18180.0°179.9°
C15C16C17H19175.7°180.0°
C16C15C14H16179.5°180.0°
C17C16C15H17177.8°179.9°
HC1C2H259.6°180.0°
HC1C2H460.4°60.0°
HC1C2H3179.6°60.0°
H1C1C2H259.5°60.0°
H1C1C2H4179.5°179.9°
H1C1C2H360.5°60.1°
H2C2H4H3119.9°120.0°
H13C9H12H14120.0°120.0°
H19C17C16H184.3°0.1°
H18C16C15H172.2°0.1°
H17C15C14H160.5°0.0°
H16C14C13H151.2°0.2°

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon