Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

JQ5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13C14sing1.53Å1.56Å
C13O12sing1.43Å1.39Å
O12P10sing1.61Å1.71Å
O15P10doub1.48Å1.49Å
P10C6sing1.81Å1.84Å
P10O11sing1.61Å1.49Å
C5C6sing1.51Å1.53Å
C5C4sing1.53Å1.53Å
C6O7doub1.21Å1.24Å
C4C1sing1.51Å1.54Å
C1O1doub1.21Å1.26Å
C1O3sing1.34Å1.25Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
O3H3sing0.97Å0.95Å
C5H4sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
O11H6sing0.97Å0.95Å
C13H7sing1.09Å1.10Å
C13H8sing1.09Å1.10Å
C14H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C14C13O12110.6°109.5°
C14C13H7109.2°109.5°
C14C13H8109.2°109.5°
C13C14H9109.5°109.5°
C13C14H10109.5°109.4°
C13C14H11109.5°109.5°
C13O12P10124.0°123.0°
O12C13H7109.2°109.5°
O12C13H8109.2°109.4°
O12P10O15103.3°109.4°
O12P10C6105.3°109.5°
O12P10O11105.2°109.4°
O15P10C6113.0°109.5°
O15P10O11124.4°109.5°
C6P10O11104.0°109.5°
P10C6C5112.4°120.0°
P10C6O7125.1°120.0°
P10O11H6109.5°114.0°
C6C5C4117.5°109.5°
C5C6O7122.5°120.0°
C6C5H4107.4°109.5°
C6C5H5107.5°109.5°
C5C4C1112.9°109.5°
C5C4H1108.6°109.5°
C5C4H2108.6°109.5°
C4C5H4107.4°109.5°
C4C5H5107.4°109.5°
C4C1O1118.2°120.0°
C4C1O3119.9°120.0°
C1C4H1108.6°109.5°
C1C4H2108.6°109.5°
O1C1O3122.0°120.0°
C1O3H3109.5°117.0°
H1C4H2109.5°109.5°
H4C5H5109.5°109.5°
H7C13H8109.5°109.5°
H9C14H10109.5°109.5°
H9C14H11109.5°109.5°
H10C14H11109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C14C13O12H7120.2°120.0°
C14C13O12H8120.1°120.0°
C14C13O12P1065.8°180.0°
C14C13H7H8119.5°120.0°
C13C14H9H10120.0°120.0°
C13C14H9H11120.0°120.0°
C13C14H10H11120.0°119.9°
C13O12P10O1533.5°55.0°
C13O12P10C6152.3°175.0°
C13O12P10O1198.2°65.0°
O12C13H7H8119.5°120.0°
O12C13C14H9180.0°60.0°
O12C13C14H1060.0°60.1°
O12C13C14H1160.0°180.0°
O12P10O15C6113.3°120.0°
O12P10O15O11119.2°120.0°
O12P10C6O11110.4°120.0°
O12P10C6C5140.2°180.0°
O12P10C6O740.1°0.0°
O12P10O11H6118.4°60.0°
P10O12C13H754.3°60.0°
P10O12C13H8174.0°60.0°
O15P10C6O11137.5°120.0°
O15P10C6C528.1°60.0°
O15P10C6O7152.2°119.9°
O15P10O11H60.0°180.0°
P10C6C5O7179.8°180.0°
P10C6C5C4163.4°180.0°
P10C6C5H442.3°60.0°
P10C6C5H575.4°60.0°
C6P10O11H6131.2°60.0°
O11P10C6C5109.5°60.0°
O11P10C6O770.3°120.0°
C6C5C4H4121.1°120.0°
C6C5C4H5121.2°120.0°
C6C5C4C175.7°180.0°
C6C5C4H1163.8°60.0°
C6C5C4H244.8°60.0°
C6C5H4H5116.4°120.0°
C4C5C6O716.3°0.0°
C5C4C1H1120.5°120.0°
C5C4C1H2120.5°120.0°
C5C4C1O128.8°0.0°
C5C4C1O3152.6°180.0°
C5C4H1H2118.4°120.0°
C4C5H4H5116.4°120.0°
O7C6C5H4137.5°120.0°
O7C6C5H5104.8°120.0°
C4C1O1O3178.5°180.0°
C1C4H1H2118.4°120.0°
C4C1O3H3178.5°180.0°
C1C4C5H445.4°60.0°
C1C4C5H5163.1°60.0°
O1C1C4H1149.3°120.0°
O1C1C4H291.7°120.0°
O1C1O3H30.0°0.0°
O3C1C4H132.1°60.0°
O3C1C4H286.8°60.0°
H1C4C5H475.1°180.0°
H1C4C5H542.6°60.0°
H2C4C5H4166.0°60.0°
H2C4C5H576.3°180.0°
H7C13C14H959.8°180.0°
H7C13C14H1060.2°59.9°
H7C13C14H11179.8°60.0°
H8C13C14H959.8°60.0°
H8C13C14H10179.9°180.0°
H8C13C14H1160.2°60.1°
H9C14H10H11120.0°120.0°

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon