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JNT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.32Å1.35ÅAromatic
N1C6sing1.33Å1.33ÅAromatic
N6C6sing1.38Å1.35Å
C2N3sing1.32Å1.34ÅAromatic
C6C5doub1.41Å1.44ÅAromatic
N3C4doub1.33Å1.37ÅAromatic
C5C4sing1.41Å1.45ÅAromatic
C5N7sing1.35Å1.36ÅAromatic
C4N9sing1.37Å1.34ÅAromatic
N7C8doub1.30Å1.33ÅAromatic
O2'C2'sing1.43Å1.43Å
N9C8sing1.36Å1.34ÅAromatic
N9C1'sing1.47Å1.48Å
C1'C2'sing1.55Å1.50Å
C1'O4'sing1.44Å1.43Å
C2'C3'sing1.55Å1.52Å
O4'C4'sing1.44Å1.42Å
C3'O3'sing1.43Å1.42Å
C3'C4'sing1.54Å1.48Å
C4'C5'sing1.53Å1.50Å
O5'C5'sing1.43Å1.42Å
O5'PAsing1.61Å1.60Å
O1APAdoub1.48Å1.49Å
O2APAsing1.61Å1.47Å
PAO3Asing1.61Å1.61Å
O2CC2Asing1.43Å1.44Å
O3APBsing1.61Å1.60Å
O4CC4Asing1.43Å1.43Å
C2AC1Asing1.53Å1.53Å
C2AC3Asing1.53Å1.54Å
C1AO1Csing1.43Å1.29Å
O1BPBdoub1.48Å1.49Å
PBO5Asing1.61Å1.60Å
PBO2Bsing1.61Å1.52Å
C4AC3Asing1.53Å1.53Å
C4AC5Asing1.53Å1.52Å
O5AC5Asing1.43Å1.44Å
C5'H1sing1.09Å1.10Å
C5'H2sing1.09Å1.10Å
C4'H3sing1.09Å1.10Å
C3'H4sing1.09Å1.10Å
O3'H5sing0.97Å0.95Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
C1'H8sing1.09Å1.10Å
C8H9sing1.08Å1.08Å
C2H10sing1.08Å1.08Å
N6H11sing0.97Å1.00Å
N6H12sing0.97Å1.00Å
O1CH13sing0.97Å0.95Å
C1AH14sing1.09Å1.10Å
C1AH15sing1.09Å1.10Å
C2AH16sing1.09Å1.10Å
O2CH17sing0.97Å0.95Å
C3AH18sing1.09Å1.10Å
O3CH19sing0.97Å0.95Å
C4AH20sing1.09Å1.10Å
O4CH21sing0.97Å0.95Å
C5AH22sing1.09Å1.10Å
C5AH23sing1.09Å1.10Å
O2BH24sing0.97Å0.95Å
O2AH25sing0.97Å0.95Å
C3AO3Csing1.43Å1.46Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6124.0°121.2°
N1C2N3122.5°122.5°
N1C2H10118.7°118.7°
N1C6N6123.4°120.8°
N1C6C5116.8°118.5°
N6C6C5119.7°120.7°
C6N6H11109.5°120.0°
C6N6H12109.4°120.1°
C2N3C4118.2°120.7°
N3C2H10118.8°118.8°
C6C5C4117.6°118.2°
C6C5N7133.9°134.7°
N3C4C5120.8°119.1°
N3C4N9134.7°135.0°
C4C5N7108.5°107.1°
C5C4N9104.5°106.0°
C5N7C8105.8°109.4°
C4N9C8109.4°107.4°
C4N9C1'123.6°126.2°
N7C8N9111.8°110.0°
N7C8H9124.1°125.0°
O2'C2'C1'110.2°111.0°
O2'C2'C3'114.7°110.9°
O2'C2'H6110.6°110.8°
C2'O2'H7109.5°114.0°
C8N9C1'127.0°126.3°
N9C8H9124.1°125.0°
N9C1'C2'112.7°110.6°
N9C1'O4'103.6°110.7°
N9C1'H8110.6°110.7°
C2'C1'O4'108.1°103.5°
C1'C2'C3'102.0°102.0°
C1'C2'H6109.5°110.9°
C2'C1'H8110.3°110.6°
C1'O4'C4'111.2°107.0°
O4'C1'H8111.5°110.6°
C2'C3'O3'112.6°110.5°
C2'C3'C4'110.1°104.2°
C2'C3'H4108.0°110.6°
C3'C2'H6109.4°110.9°
O4'C4'C3'104.9°107.4°
O4'C4'C5'114.0°109.9°
O4'C4'H3110.8°109.9°
O3'C3'C4'108.3°110.5°
O3'C3'H4109.3°110.5°
C3'O3'H5109.5°113.9°
C3'C4'C5'107.5°109.9°
C3'C4'H3109.9°109.8°
C4'C3'H4108.4°110.4°
C4'C5'O5'108.5°109.5°
C4'C5'H1109.7°109.5°
C4'C5'H2109.7°109.5°
C5'C4'H3109.6°109.9°
C5'O5'PA122.4°123.1°
O5'C5'H1109.7°109.4°
O5'C5'H2109.7°109.4°
O5'PAO1A112.1°109.5°
O5'PAO2A106.7°109.5°
O5'PAO3A100.6°109.5°
O1APAO2A116.5°109.5°
O1APAO3A110.3°109.5°
O2APAO3A109.4°109.5°
PAO2AH25109.5°114.0°
PAO3APB131.4°134.0°
O2CC2AC1A108.6°109.5°
O2CC2AC3A110.0°109.5°
O2CC2AH16110.1°109.5°
C2AO2CH17109.5°114.0°
O3APBO1B109.6°109.5°
O3APBO5A107.3°109.4°
O3APBO2B104.7°109.5°
O4CC4AC3A113.5°109.5°
O4CC4AC5A107.2°109.4°
O4CC4AH20108.2°109.5°
C4AO4CH21109.5°114.0°
C1AC2AC3A110.4°109.5°
C2AC1AO1C115.3°109.5°
C2AC1AH14108.0°109.5°
C2AC1AH15108.0°109.5°
C1AC2AH16108.9°109.4°
C2AC3AC4A114.3°109.5°
C3AC2AH16108.8°109.4°
C2AC3AH18107.4°109.5°
C2AC3AO3C113.6°109.5°
C1AO1CH13109.5°114.0°
O1CC1AH14108.0°109.5°
O1CC1AH15108.0°109.5°
O1BPBO5A108.5°109.5°
O1BPBO2B118.0°109.5°
O5APBO2B108.3°109.5°
PBO5AC5A121.0°123.0°
PBO2BH24109.5°114.0°
C3AC4AC5A113.8°109.5°
C4AC3AH18107.5°109.5°
C3AC4AH20106.9°109.5°
C4AC3AO3C105.4°109.5°
C4AC5AO5A110.2°109.5°
C5AC4AH20107.0°109.5°
C4AC5AH22109.3°109.5°
C4AC5AH23109.3°109.5°
O5AC5AH22109.3°109.5°
O5AC5AH23109.3°109.4°
H1C5'H2109.5°109.5°
H11N6H12109.4°120.0°
H14C1AH15109.5°109.5°
H18C3AO3C108.3°109.5°
H19O3CC3A109.5°113.9°
H22C5AH23109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6N6179.5°180.0°
N1C2N3H10180.0°179.9°
C2N1C6C54.2°0.8°
N1C2N3C42.4°0.1°
N1C6N6C5176.2°179.1°
C6N1C2N34.4°0.4°
N1C6C5C42.3°0.8°
N1C6C5N7179.3°179.7°
C6N1C2H10175.6°179.5°
N1C6N6H110.0°0.1°
N1C6N6H12120.0°180.0°
N6C6C5C4178.7°179.9°
N6C6C5N72.8°0.6°
C6N6H11H12120.0°180.0°
C2N3C4C50.6°0.1°
C2N3C4N9179.4°179.5°
C6C5C4N30.6°0.4°
C6C5C4N7178.8°179.6°
C6C5C4N9179.4°180.0°
C6C5N7C8179.2°179.7°
C5C6N6H11176.2°179.2°
C5C6N6H1256.3°0.9°
N3C4C5N9180.0°179.7°
N3C4C5N7179.5°180.0°
N3C4N9C8179.7°179.9°
N3C4N9C1'1.6°0.3°
C4N3C2H10177.6°180.0°
C4C5N7C80.6°0.2°
C5C4N9C80.3°0.4°
C5C4N9C1'178.4°179.9°
N7C5C4N90.6°0.4°
C5N7C8N90.4°0.0°
C5N7C8H9179.6°180.0°
C4N9C8N70.1°0.2°
C4N9C8C1'178.6°179.8°
C4N9C1'C2'155.8°84.7°
C4N9C1'O4'87.7°161.2°
C4N9C1'H831.9°38.2°
C4N9C8H9180.0°179.8°
N7C8N9H9180.0°180.0°
N7C8N9C1'178.7°180.0°
O2'C2'C1'N9106.6°86.3°
O2'C2'C1'C3'122.3°118.2°
O2'C2'C1'H6121.9°123.6°
O2'C2'C1'O4'139.6°155.2°
O2'C2'C3'H6124.9°123.6°
O2'C2'C3'O3'7.2°20.4°
O2'C2'C3'C4'128.2°139.1°
O2'C2'C3'H4113.6°102.2°
O2'C2'C1'H817.5°36.7°
C8N9C1'C2'25.8°95.0°
C8N9C1'O4'90.8°19.1°
C8N9C1'H8149.7°142.0°
N9C1'C2'O4'113.8°118.6°
N9C1'C2'H8124.1°123.0°
N9C1'O4'H8118.9°123.0°
N9C1'C2'C3'131.1°155.5°
N9C1'O4'C4'140.2°158.4°
N9C1'C2'H615.3°37.3°
C1'N9C8H91.3°0.0°
C2'C1'O4'H8121.3°118.5°
C1'C2'C3'H6115.9°118.2°
C2'C1'O4'C4'20.5°39.9°
C1'C2'C3'O3'112.0°97.8°
C1'C2'C3'C4'9.0°20.9°
C1'C2'C3'H4127.2°139.6°
C1'C2'O2'H7180.0°174.2°
O4'C1'C2'C3'17.2°37.0°
C1'O4'C4'C3'14.0°26.4°
C1'O4'C4'C5'131.4°145.9°
C1'O4'C4'H3104.5°93.0°
O4'C1'C2'H698.5°81.2°
C2'C3'C4'O4'2.4°1.9°
C2'C3'O3'C4'122.0°114.8°
C2'C3'O3'H4120.0°122.7°
C2'C3'C4'H4117.9°118.8°
C2'C3'C4'C5'124.1°121.5°
C2'C3'C4'H3116.7°117.6°
C2'C3'O3'H5180.0°65.2°
C3'C2'O2'H765.5°61.5°
C3'C2'C1'H8104.8°81.5°
O4'C4'C3'O3'126.0°120.7°
O4'C4'C3'C5'121.7°119.5°
O4'C4'C3'H3119.1°119.5°
O4'C4'C5'H3124.7°121.1°
O4'C4'C5'O5'58.0°66.7°
O4'C4'C5'H161.8°53.3°
O4'C4'C5'H2177.8°173.3°
O4'C4'C3'H4115.6°116.8°
C4'O4'C1'H8100.9°78.5°
O3'C3'C4'H4118.5°122.5°
O3'C3'C4'C5'112.3°119.8°
O3'C3'C4'H36.8°1.2°
O3'C3'C2'H6132.1°144.0°
C3'C4'C5'H3119.4°120.9°
C3'C4'C5'O5'57.9°175.3°
C3'C4'C5'H1177.7°64.7°
C3'C4'C5'H262.0°55.3°
C4'C3'O3'H558.0°180.0°
C4'C3'C2'H6106.9°97.3°
C4'C5'O5'H1119.9°120.0°
C4'C5'O5'H2119.8°120.1°
C4'C5'O5'PA144.5°180.0°
C4'C5'H1H2120.4°120.1°
C5'C4'C3'H46.1°2.7°
C5'O5'PAO1A88.9°55.0°
C5'O5'PAO2A142.4°65.0°
C5'O5'PAO3A28.3°175.0°
O5'C5'H1H2120.4°119.9°
O5'C5'C4'H3177.2°54.4°
O5'PAO1AO2A123.4°120.0°
O5'PAO1AO3A111.2°120.0°
O5'PAO2AO3A108.0°120.0°
O5'PAO3APB154.4°165.0°
PAO5'C5'H195.7°59.9°
PAO5'C5'H224.6°60.0°
O5'PAO2AH25126.1°60.0°
O1APAO2AO3A125.9°120.0°
O1APAO3APB35.9°45.0°
O1APAO2AH250.0°180.0°
O2APAO3APB93.5°75.0°
PAO3APBO1B70.1°45.0°
PAO3APBO5A47.5°165.0°
PAO3APBO2B162.4°75.0°
O3APAO2AH25125.9°60.0°
O2CC2AC1AC3A120.8°120.0°
O2CC2AC1AH16119.9°120.1°
O2CC2AC3AH16120.6°120.1°
O2CC2AC1AO1C59.6°65.0°
O2CC2AC3AC4A59.2°60.0°
O2CC2AC1AH14179.5°175.0°
O2CC2AC1AH1561.2°55.0°
O2CC2AC3AH1860.0°60.0°
O2CC2AC3AO3C179.8°180.0°
O3APBO1BO5A116.9°120.0°
O3APBO1BO2B119.6°120.0°
O3APBO5AO2B112.5°120.0°
O3APBO5AC5A57.8°175.0°
O3APBO2BH24122.1°60.0°
O4CC4AC3AC2A18.3°60.0°
O4CC4AC3AC5A122.9°120.0°
O4CC4AC3AH20119.2°120.0°
O4CC4AC5AH20115.9°120.0°
O4CC4AC5AO5A62.6°65.0°
O4CC4AC3AH18137.5°60.0°
O4CC4AC5AH22177.3°175.0°
O4CC4AC5AH2357.5°55.0°
O4CC4AC3AO3C107.1°180.0°
C1AC2AC3AH16119.4°119.9°
C2AC1AO1CH14120.9°120.0°
C2AC1AO1CH15120.8°120.0°
C1AC2AC3AC4A179.2°180.0°
C2AC1AO1CH13180.0°180.0°
C2AC1AH14H15117.3°120.0°
C1AC2AO2CH17180.0°60.0°
C1AC2AC3AH1860.0°60.1°
C1AC2AC3AO3C59.8°60.0°
C3AC2AC1AO1C61.2°175.0°
C2AC3AC4AH18119.1°120.0°
C2AC3AC4AO3C125.5°120.0°
C2AC3AC4AC5A104.6°180.0°
C3AC2AC1AH1459.7°55.0°
C3AC2AC1AH15178.0°65.0°
C3AC2AO2CH1759.0°60.0°
C2AC3AH18O3C123.1°120.0°
C2AC3AO3CH19180.0°60.0°
C2AC3AC4AH20137.5°60.0°
O1CC1AH14H15117.3°120.0°
O1CC1AC2AH16179.5°55.1°
O1BPBO5AO2B129.1°120.0°
O1BPBO5AC5A176.1°55.0°
O1BPBO2BH240.0°180.0°
PBO5AC5AC4A150.5°180.0°
PBO5AC5AH2289.4°60.0°
PBO5AC5AH2330.4°60.0°
O5APBO2BH24123.6°60.0°
O2BPBO5AC5A54.7°65.0°
C3AC4AC5AH20117.8°120.0°
C3AC4AC5AO5A171.1°175.0°
C4AC3AC2AH1661.4°60.1°
C4AC3AH18O3C113.5°120.0°
C4AC3AO3CH1954.1°60.0°
C3AC4AO4CH21180.0°60.0°
C3AC4AC5AH2251.0°55.0°
C3AC4AC5AH2368.8°65.0°
C4AC5AO5AH22120.1°120.0°
C4AC5AO5AH23120.1°120.0°
C5AC4AC3AH1814.5°60.0°
C5AC4AO4CH2153.5°60.0°
C4AC5AH22H23119.7°120.0°
C5AC4AC3AO3C130.0°60.0°
O5AC5AC4AH2053.3°55.0°
O5AC5AH22H23119.6°120.0°
H1C5'C4'H362.9°174.3°
H2C5'C4'H357.4°65.6°
H3C4'C3'H4125.3°123.7°
H4C3'O3'H559.9°57.5°
H4C3'C2'H611.3°21.4°
H6C2'O2'H758.8°62.1°
H6C2'C1'H8139.4°160.3°
H13O1CC1AH1459.1°60.0°
H13O1CC1AH1559.1°60.0°
H14C1AC2AH1659.6°65.0°
H15C1AC2AH1658.7°175.0°
H16C2AO2CH1760.9°180.0°
H16C2AC3AH18179.4°180.0°
H16C2AC3AO3C59.6°60.0°
H18C3AO3CH1960.7°180.0°
H18C3AC4AH20103.4°180.0°
H20C4AO4CH2161.6°180.0°
H20C4AC5AH2266.8°65.0°
H20C4AC5AH23173.4°175.0°
H20C4AC3AO3C12.1°60.0°

224931

PDB entries from 2024-09-11

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