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JL5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N3C2doub1.31Å1.34ÅAromatic
N3C9sing1.34Å1.34ÅAromatic
S5C9sing1.76Å1.70ÅAromatic
S5C6sing1.75Å1.70ÅAromatic
C22C10sing1.53Å1.52Å
C2N1sing1.32Å1.33ÅAromatic
C9C8doub1.40Å1.38ÅAromatic
C6C10sing1.51Å1.53Å
C6C7doub1.33Å1.38ÅAromatic
N1C4doub1.32Å1.33ÅAromatic
C8C7sing1.46Å1.39ÅAromatic
C8C4sing1.41Å1.39ÅAromatic
C7C23sing1.48Å1.48Å
C4O11sing1.35Å1.35Å
O16C14doub1.21Å1.21Å
C14O15sing1.34Å1.23Å
C14C12sing1.51Å1.54Å
C23C28doub1.39Å1.36ÅAromatic
C23C24sing1.39Å1.39ÅAromatic
O11C12sing1.43Å1.45Å
C28C26sing1.39Å1.39ÅAromatic
C12C13sing1.53Å1.51Å
C34C35sing1.53Å1.55Å
C34N32sing1.47Å1.53Å
C29C24sing1.51Å1.52Å
C35N36sing1.47Å1.46Å
C24C27doub1.38Å1.40ÅAromatic
N36C39sing1.47Å1.47Å
N36C37sing1.47Å1.45Å
C26N32sing1.40Å1.40Å
C26C25doub1.39Å1.39ÅAromatic
N32C38sing1.47Å1.51Å
C13C17sing1.51Å1.54Å
C27C25sing1.39Å1.37ÅAromatic
C27CLsing1.74Å1.73Å
C25O30sing1.36Å1.33Å
C38C37sing1.53Å1.51Å
C17C33doub1.38Å1.40ÅAromatic
C17C18sing1.38Å1.37ÅAromatic
C33C20sing1.38Å1.39ÅAromatic
C18C21doub1.38Å1.38ÅAromatic
C20C19doub1.38Å1.39ÅAromatic
C21C19sing1.38Å1.38ÅAromatic
C2H1sing1.08Å1.08Å
C12H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C13H4sing1.09Å1.10Å
C10H5sing1.09Å1.10Å
C10H6sing1.09Å1.10Å
C34H7sing1.09Å1.10Å
C34H8sing1.09Å1.10Å
C35H9sing1.09Å1.10Å
C35H10sing1.09Å1.10Å
C39H12sing1.09Å1.10Å
C39H13sing1.09Å1.10Å
C39H14sing1.09Å1.10Å
C37H15sing1.09Å1.10Å
C37H16sing1.09Å1.10Å
C38H17sing1.09Å1.10Å
C38H18sing1.09Å1.10Å
C28H19sing1.08Å1.08Å
O30H20sing0.97Å0.95Å
C29H21sing1.09Å1.10Å
C29H22sing1.09Å1.10Å
C29H23sing1.09Å1.10Å
C22H24sing1.09Å1.10Å
C22H25sing1.09Å1.10Å
C22H26sing1.09Å1.10Å
O15H27sing0.97Å0.95Å
C18H28sing1.08Å1.08Å
C21H29sing1.08Å1.08Å
C19H30sing1.08Å1.08Å
C20H31sing1.08Å1.08Å
C33H32sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N3C9119.6°121.0°
N3C2N1122.3°122.2°
N3C2H1118.9°118.9°
N3C9S5128.0°131.1°
N3C9C8119.9°119.1°
C9S5C691.4°92.4°
S5C9C8112.1°109.8°
S5C6C10123.2°124.3°
S5C6C7112.2°111.3°
C22C10C6108.2°109.4°
C22C10H5109.8°109.5°
C22C10H6109.8°109.5°
C10C22H24109.5°109.4°
C10C22H25109.5°109.4°
C10C22H26109.5°109.5°
C2N1C4119.9°121.1°
N1C2H1118.9°118.9°
C9C8C7112.0°112.1°
C9C8C4118.5°117.6°
C10C6C7124.5°124.4°
C6C10H5109.8°109.5°
C6C10H6109.8°109.5°
C6C7C8112.4°114.4°
C6C7C23120.0°122.8°
N1C4C8119.8°119.0°
N1C4O11120.1°120.5°
C7C8C4129.6°130.3°
C8C7C23127.7°122.8°
C8C4O11120.1°120.5°
C7C23C28117.9°120.1°
C7C23C24123.0°120.0°
C4O11C12116.2°117.0°
O16C14O15120.5°120.0°
O16C14C12116.8°120.0°
O15C14C12122.6°120.0°
C14O15H27109.5°117.0°
C14C12O11111.1°109.5°
C14C12C13111.9°109.5°
C14C12H2108.2°109.5°
C28C23C24119.1°119.9°
C23C28C26122.2°119.9°
C23C28H19118.9°120.0°
C23C24C29120.9°120.0°
C23C24C27119.0°120.0°
O11C12C13107.5°109.5°
O11C12H2109.4°109.4°
C28C26N32115.4°120.0°
C28C26C25118.8°119.9°
C26C28H19118.9°120.1°
C12C13C17111.4°109.5°
C13C12H2108.7°109.5°
C12C13H3109.0°109.5°
C12C13H4109.0°109.5°
C35C34N32111.6°109.3°
C34C35N36109.6°109.4°
C35C34H7108.9°109.5°
C35C34H8108.9°109.5°
C34C35H9109.5°109.5°
C34C35H10109.4°109.5°
C34N32C26118.7°111.0°
C34N32C38121.0°110.9°
N32C34H7109.0°109.4°
N32C34H8108.9°109.5°
C29C24C27120.1°120.0°
C24C29H21109.5°109.5°
C24C29H22109.4°109.5°
C24C29H23109.5°109.5°
C35N36C39110.4°111.0°
C35N36C37108.1°110.9°
N36C35H9109.4°109.5°
N36C35H10109.5°109.5°
C24C27C25121.4°120.2°
C24C27CL122.1°119.9°
C39N36C37109.2°111.0°
N36C39H12109.5°109.5°
N36C39H13109.5°109.5°
N36C39H14109.4°109.4°
N36C37C38109.3°109.3°
N36C37H15109.5°109.5°
N36C37H16109.5°109.5°
N32C26C25125.7°120.0°
C26N32C38118.4°111.0°
C26C25C27119.5°120.1°
C26C25O30124.0°119.9°
N32C38C37111.1°109.4°
N32C38H17109.1°109.6°
N32C38H18109.1°109.5°
C13C17C33121.2°120.0°
C13C17C18119.4°120.0°
C17C13H3109.0°109.4°
C17C13H4109.0°109.5°
C25C27CL116.5°119.9°
C27C25O30116.5°119.9°
C25O30H20109.5°113.9°
C38C37H15109.5°109.5°
C38C37H16109.5°109.5°
C37C38H17109.1°109.5°
C37C38H18109.1°109.4°
C33C17C18119.4°120.0°
C17C33C20121.8°120.0°
C17C33H32119.1°120.0°
C17C18C21119.0°120.0°
C17C18H28120.5°120.0°
C33C20C19118.2°120.0°
C33C20H31120.9°120.0°
C20C33H32119.2°120.0°
C18C21C19121.9°120.0°
C21C18H28120.5°120.0°
C18C21H29119.1°120.0°
C20C19C21119.7°120.0°
C20C19H30120.1°120.0°
C19C20H31120.9°120.0°
C19C21H29119.1°120.0°
C21C19H30120.1°120.0°
H3C13H4109.5°109.5°
H5C10H6109.5°109.5°
H7C34H8109.5°109.5°
H9C35H10109.4°109.5°
H12C39H13109.5°109.5°
H12C39H14109.5°109.5°
H13C39H14109.5°109.5°
H15C37H16109.5°109.5°
H17C38H18109.5°109.4°
H21C29H22109.5°109.5°
H21C29H23109.5°109.5°
H22C29H23109.5°109.5°
H24C22H25109.5°109.5°
H24C22H26109.5°109.5°
H25C22H26109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N3C9S5179.2°180.0°
N3C2N1H1180.0°179.6°
C2N3C9C80.5°0.3°
N3C2N1C42.4°0.1°
N3C9S5C8179.7°179.7°
N3C9S5C6179.5°180.0°
C9N3C2N12.1°0.4°
N3C9C8C7179.9°179.9°
N3C9C8C40.8°0.1°
C9N3C2H1177.9°180.0°
C9S5C6C10179.6°180.0°
C9S5C6C70.6°0.3°
S5C9C8C70.2°0.2°
S5C9C8C4179.5°179.7°
S5C6C10C2219.0°90.3°
C6S5C9C80.2°0.3°
S5C6C10C7178.9°179.7°
S5C6C7C80.9°0.3°
S5C6C7C23179.7°179.7°
S5C6C10H5138.9°29.7°
S5C6C10H6100.8°149.7°
C22C10C6H5119.8°120.0°
C22C10C6H6119.8°120.0°
C22C10C6C7159.8°90.0°
C22C10H5H6120.6°120.0°
C10C22H24H25120.0°119.9°
C10C22H24H26120.0°120.0°
C10C22H25H26120.0°120.1°
C2N1C4C81.1°0.3°
C2N1C4O11176.2°180.0°
C9C8C7C60.7°0.1°
C9C8C4N10.5°0.4°
C9C8C7C4179.2°179.9°
C9C8C7C23180.0°180.0°
C9C8C4O11177.8°180.0°
C10C6C7C8179.9°180.0°
C10C6C7C230.8°0.0°
C6C10H5H6120.5°120.0°
C6C10C22H24180.0°180.0°
C6C10C22H2560.0°60.0°
C6C10C22H2660.0°60.0°
C6C7C8C23179.3°180.0°
C6C7C8C4179.9°179.9°
C6C7C23C28109.4°95.7°
C6C7C23C2469.8°84.2°
C7C6C10H540.0°150.0°
C7C6C10H680.4°29.9°
N1C4C8C7179.6°179.8°
N1C4C8O11177.3°179.7°
N1C4O11C123.9°3.0°
C4N1C2H1177.6°179.7°
C7C8C4O113.1°0.1°
C8C7C23C2871.3°84.2°
C8C7C23C24109.5°95.9°
C4C8C7C230.8°0.1°
C8C4O11C12178.8°176.6°
C7C23C28C24179.2°179.9°
C7C23C28C26177.9°180.0°
C7C23C24C290.6°0.0°
C7C23C24C27179.4°179.7°
C7C23C28H192.1°0.0°
C4O11C12C1468.4°94.6°
C4O11C12C13168.9°145.3°
C4O11C12H251.1°25.3°
O16C14O15C12177.0°180.0°
O16C14C12O1116.1°5.0°
O16C14C12C13104.0°115.0°
O16C14C12H2136.3°125.0°
O16C14O15H270.0°0.0°
O15C14C12O11161.0°175.0°
O15C14C12C1378.8°65.0°
O15C14C12H240.8°55.0°
C14C12O11C13122.7°120.0°
C14C12O11H2119.5°120.0°
C14C12C13H2119.4°120.0°
C14C12C13C17169.8°175.2°
C14C12C13H349.5°55.2°
C14C12C13H469.9°64.8°
C12C14O15H27177.0°180.0°
C23C28C26H19180.0°179.9°
C28C23C24C29179.8°180.0°
C28C23C24C270.2°0.4°
C23C28C26N32179.5°179.9°
C23C28C26C252.0°0.2°
C24C23C28C261.3°0.1°
C23C24C29C27180.0°179.7°
C23C24C27C251.0°0.3°
C23C24C27CL179.6°179.7°
C24C23C28H19178.7°179.9°
C23C24C29H2190.0°89.8°
C23C24C29H22150.0°30.2°
C23C24C29H2330.0°150.1°
O11C12C13H2118.3°120.0°
O11C12C13C1768.0°64.8°
O11C12C13H3171.7°175.2°
O11C12C13H452.3°55.2°
C28C26N32C3457.1°60.3°
C28C26N32C25177.2°179.7°
C28C26N32C38107.2°63.5°
C28C26C25C271.2°0.3°
C28C26C25O30178.8°179.7°
C12C13C17H3120.3°120.0°
C12C13C17H4120.3°120.0°
C12C13C17C3377.5°90.8°
C12C13C17C18102.5°88.8°
C12C13H3H4119.1°120.0°
C35C34N32H7120.3°120.0°
C35C34N32H8120.3°120.0°
C34C35N36H9120.0°119.9°
C34C35N36H10120.0°120.0°
C34C35N36C39171.5°176.8°
C34C35N36C3769.1°59.4°
C35C34N32C26171.7°176.8°
C35C34N32C3824.4°59.3°
C35C34H7H8119.0°120.1°
C34C35H9H10119.9°120.0°
N32C34C35N3642.8°58.4°
C34N32C26C38164.3°123.8°
C34N32C26C25125.6°120.0°
C34N32C38C3728.1°59.4°
N32C34H7H8119.0°120.1°
N32C34C35H9162.8°178.4°
N32C34C35H1077.2°61.6°
C34N32C38H17148.3°60.7°
C34N32C38H1892.1°179.3°
C29C24C27C25179.0°180.0°
C29C24C27CL0.4°0.0°
C24C29H21H22120.0°120.0°
C24C29H21H23120.0°120.0°
C24C29H22H23120.0°120.0°
C35N36C39C37118.7°123.7°
C35N36C37C3873.9°59.3°
N36C35C34H7163.1°178.4°
N36C35C34H877.5°61.5°
N36C35H9H10120.0°120.1°
C35N36C39H12180.0°60.0°
C35N36C39H1360.0°180.0°
C35N36C39H1460.0°60.1°
C35N36C37H15166.1°179.3°
C35N36C37H1646.1°60.7°
C24C27C25C260.3°0.0°
C24C27C25CL178.6°180.0°
C24C27C25O30179.7°180.0°
C27C24C29H2190.0°90.5°
C27C24C29H2230.0°149.5°
C27C24C29H23150.0°29.5°
C39N36C37C38166.0°176.8°
C39N36C35H951.5°56.9°
C39N36C35H1068.4°63.2°
N36C39H12H13120.0°120.0°
N36C39H12H14120.0°120.0°
N36C39H13H14120.0°119.9°
C39N36C37H1546.0°56.9°
C39N36C37H1674.0°63.1°
N36C37C38N3250.6°58.4°
N36C37C38H15120.0°120.0°
N36C37C38H16120.0°120.0°
C37N36C35H9170.9°179.3°
C37N36C35H1051.0°60.6°
C37N36C39H1261.3°63.8°
C37N36C39H13178.7°56.2°
C37N36C39H1458.7°176.2°
N36C37H15H16120.1°120.0°
N36C37C38H17170.8°61.6°
N36C37C38H1869.7°178.4°
N32C26C25C27178.3°180.0°
N32C26C25O301.7°0.0°
C26N32C38C37167.9°176.8°
C26N32C34H751.3°56.9°
C26N32C34H868.0°63.2°
C26N32C38H1747.7°63.2°
C26N32C38H1871.8°56.9°
N32C26C28H190.6°0.0°
C25C26N32C3870.0°116.2°
C26C25C27O30180.0°180.0°
C26C25C27CL178.9°180.0°
C25C26C28H19178.0°179.7°
C26C25O30H20180.0°90.0°
N32C38C37H17120.2°120.1°
N32C38C37H18120.2°120.0°
C38N32C34H7144.8°179.3°
C38N32C34H895.9°60.6°
N32C38C37H15170.6°178.4°
N32C38C37H1669.4°61.6°
N32C38H17H18119.3°120.1°
C13C17C33C18179.9°179.7°
C13C17C33C20179.2°179.8°
C13C17C18C21178.6°180.0°
C17C13C12H250.4°55.2°
C17C13H3H4119.1°120.0°
C13C17C18H281.4°0.1°
C13C17C33H320.8°0.0°
C27C25O30H200.0°90.0°
CLC27C25O301.1°0.0°
C38C37H15H16120.1°120.1°
C37C38H17H18119.3°119.9°
C17C33C20H32180.0°179.8°
C33C17C18C211.4°0.3°
C17C33C20C191.8°0.5°
C33C17C13H342.8°29.2°
C33C17C13H4162.2°149.1°
C33C17C18H28178.6°179.8°
C17C33C20H31178.2°179.8°
C18C17C33C200.7°0.5°
C17C18C21H28180.0°179.9°
C17C18C21C192.6°0.1°
C18C17C13H3137.2°151.1°
C18C17C13H417.8°31.2°
C17C18C21H29177.4°179.9°
C18C17C33H32179.3°179.7°
C33C20C19H31180.0°179.8°
C33C20C19C210.7°0.2°
C33C20C19H30179.3°179.8°
C18C21C19C201.5°0.0°
C18C21C19H29180.0°180.0°
C18C21C19H30178.5°180.0°
C20C19C21H30180.0°180.0°
C20C19C21H29178.5°180.0°
C19C20C33H32178.2°179.8°
C19C21C18H28177.4°180.0°
C21C19C20H31179.3°180.0°
H2C12C13H369.9°64.8°
H2C12C13H4170.7°175.2°
H5C10C22H2460.2°60.0°
H5C10C22H2559.8°180.0°
H5C10C22H26179.8°60.0°
H6C10C22H2460.2°60.0°
H6C10C22H25179.8°60.0°
H6C10C22H2659.8°180.0°
H7C34C35H976.8°61.7°
H7C34C35H1043.1°58.3°
H8C34C35H942.5°58.4°
H8C34C35H10162.5°178.4°
H12C39H13H14120.0°120.0°
H15C37C38H1769.2°58.3°
H15C37C38H1850.3°61.6°
H16C37C38H1750.8°178.4°
H16C37C38H18170.4°58.5°
H21C29H22H23120.0°120.0°
H24C22H25H26120.0°120.0°
H28C18C21H292.6°0.0°
H29C21C19H301.5°0.0°
H30C19C20H310.7°0.0°
H31C20C33H321.8°0.0°

226262

PDB entries from 2024-10-16

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