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SummaryGeometryRelated PDB entries

JEI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
P02O01doub1.48Å1.51Å
O03P02sing1.61Å1.52Å
O04P02sing1.61Å1.52Å
C05P02sing1.82Å1.86Å
C06C05sing1.53Å1.54Å
C07C06sing1.51Å1.53Å
C09N08sing1.47Å1.52Å
C10C09sing1.55Å1.59Å
N13C12doub1.30Å1.32ÅAromatic
C12N11sing1.37Å1.35ÅAromatic
C14N11sing1.37Å1.32ÅAromatic
C15C14doub1.40Å1.37ÅAromatic
C16C15sing1.41Å1.51Å
C18N17sing1.36Å1.44Å
N19C18sing1.37Å1.44Å
N20C18doub1.31Å1.43Å
N17C16sing1.35Å1.43Å
O21C16doub1.22Å1.19Å
N11C10sing1.47Å1.53Å
C22C10sing1.55Å1.28Å
C23C22sing1.54Å1.65Å
C24C23sing1.53Å1.52Å
O25C24sing1.43Å1.40Å
C26O25sing1.43Å1.41Å
C27C26sing1.53Å1.52Å
P28C27sing1.82Å1.86Å
O29P28doub1.48Å1.51Å
O30P28sing1.61Å1.51Å
O31P28sing1.61Å1.51Å
N08C07sing1.35Å1.45Å
O32C07doub1.21Å1.19Å
N08C23sing1.47Å1.33Å
N13C15sing1.36Å1.34ÅAromatic
C14N20sing1.34Å1.48Å
C10H101sing1.09Å1.10Å
C22H222sing1.09Å1.10Å
C22H221sing1.09Å1.10Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C26H262sing1.09Å1.10Å
C26H261sing1.09Å1.10Å
C05H051sing1.09Å1.10Å
C05H052sing1.09Å1.10Å
C06H061sing1.09Å1.10Å
C06H062sing1.09Å1.10Å
C09H091sing1.09Å1.10Å
C09H092sing1.09Å1.10Å
C12H121sing1.08Å1.08Å
C23H231sing1.09Å1.10Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
N17H171sing0.97Å1.00Å
N19H192sing0.97Å1.00Å
N19H191sing0.97Å1.00Å
O03H1sing0.97Å0.95Å
O04H2sing0.97Å0.95Å
O30H3sing0.97Å0.95Å
O31H4sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01P02O03110.0°109.5°
O01P02O04108.9°109.4°
O01P02C05110.5°109.5°
O03P02O04109.2°109.5°
O03P02C05109.6°109.5°
P02O03H1109.5°114.0°
O04P02C05108.6°109.5°
P02O04H2109.5°114.0°
P02C05C06113.7°109.4°
P02C05H051108.4°109.5°
P02C05H052108.4°109.5°
C05C06C07107.2°109.4°
C06C05H051108.4°109.4°
C06C05H052108.4°109.5°
C05C06H061110.0°109.5°
C05C06H062110.0°109.5°
C06C07N08120.9°120.0°
C06C07O32120.7°120.0°
C07C06H061110.0°109.4°
C07C06H062110.1°109.4°
N08C09C10104.1°104.8°
C09N08C07125.1°125.7°
C09N08C23107.8°108.7°
N08C09H091110.8°110.4°
N08C09H092110.8°110.4°
C09C10N11116.9°111.0°
C09C10C22106.9°101.6°
C09C10H101107.9°111.0°
C10C09H091110.8°110.4°
C10C09H092110.8°110.4°
N13C12N11108.4°109.8°
C12N13C15107.5°109.3°
N13C12H121125.8°125.1°
C12N11C14109.1°107.5°
C12N11C10125.1°126.2°
N11C12H121125.8°125.1°
N11C14C15106.5°106.1°
C14N11C10125.8°126.2°
N11C14N20131.6°134.2°
C14C15C16118.5°118.6°
C14C15N13108.5°107.3°
C15C14N20121.8°119.7°
C15C16N17119.8°118.4°
C15C16O21119.1°120.8°
C16C15N13133.1°134.2°
N17C18N19122.7°119.0°
N17C18N20119.3°121.9°
C18N17C16120.8°120.3°
C18N17H171119.6°119.9°
N19C18N20118.0°119.1°
C18N19H192120.0°120.0°
C18N19H191120.0°120.0°
C18N20C14119.8°121.1°
N17C16O21121.1°120.8°
C16N17H171119.6°119.8°
N11C10C22104.1°111.0°
N11C10H101108.6°110.9°
C10C22C23107.0°103.0°
C22C10H101112.3°111.0°
C10C22H222110.1°110.8°
C10C22H221110.1°110.7°
C22C23C24108.2°109.9°
C22C23N08108.1°107.3°
C23C22H222110.1°110.7°
C23C22H221110.1°110.8°
C22C23H231106.8°109.9°
C23C24O25114.0°109.5°
C24C23N08114.2°109.9°
C23C24H241108.3°109.4°
C23C24H242108.3°109.4°
C24C23H231108.2°109.9°
C24O25C26117.0°114.0°
O25C24H241108.3°109.5°
O25C24H242108.3°109.5°
O25C26C27103.6°109.5°
O25C26H262110.9°109.5°
O25C26H261110.9°109.4°
C26C27P28117.6°109.5°
C27C26H262110.9°109.5°
C27C26H261110.9°109.5°
C26C27H271107.4°109.5°
C26C27H272107.4°109.4°
C27P28O29114.8°109.5°
C27P28O30102.3°109.5°
C27P28O31107.6°109.5°
P28C27H271107.4°109.5°
P28C27H272107.4°109.5°
O29P28O30113.4°109.5°
O29P28O31107.6°109.5°
O30P28O31111.0°109.5°
P28O30H3109.5°114.0°
P28O31H4109.5°114.0°
N08C07O32118.4°120.0°
C07N08C23127.0°125.6°
N08C23H231111.0°110.0°
H222C22H221109.5°110.6°
H241C24H242109.5°109.5°
H262C26H261109.5°109.5°
H051C05H052109.5°109.5°
H061C06H062109.5°109.5°
H091C09H092109.4°110.4°
H271C27H272109.5°109.5°
H192N19H191120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01P02O03O04119.5°120.0°
O01P02O03C05121.7°120.0°
O01P02O04C05120.5°120.0°
O01P02C05C0647.8°55.0°
O01P02C05H051168.4°175.0°
O01P02C05H05272.8°65.0°
O01P02O03H10.0°180.0°
O01P02O04H20.0°60.0°
O03P02O04C05119.4°120.0°
O03P02C05C0673.5°65.0°
O03P02C05H05147.1°55.0°
O03P02C05H052165.9°175.0°
O03P02O04H2120.1°59.9°
O04P02C05C06167.3°175.0°
O04P02C05H05172.1°65.1°
O04P02C05H05246.7°55.0°
O04P02O03H1119.5°60.0°
P02C05C06H051120.6°119.9°
P02C05C06H052120.6°120.0°
P02C05C06C0784.4°180.0°
P02C05H051H052118.1°120.0°
P02C05C06H061155.9°60.0°
P02C05C06H06235.3°60.1°
C05P02O03H1121.7°60.0°
C05P02O04H2120.4°180.0°
C05C06C07H061119.6°120.0°
C05C06C07H062119.6°120.0°
C05C06C07N08164.5°180.0°
C05C06C07O3216.4°0.0°
C06C05H051H052118.1°120.1°
C05C06H061H062121.0°120.1°
C06C07N08C09178.0°0.0°
C06C07N08O32179.2°180.0°
C06C07N08C232.4°180.0°
C07C06C05H05136.2°60.0°
C07C06C05H052155.0°60.0°
C07C06H061H062121.1°120.0°
N08C09C10H091119.1°118.9°
N08C09C10H092119.2°118.8°
N08C09C10N11141.6°81.1°
N08C09C10C2225.4°37.0°
C09N08C23C225.3°1.1°
C09N08C23C24125.7°118.3°
C09N08C07C23175.6°180.0°
C09N08C07O322.8°180.0°
N08C09C10H10195.6°155.1°
N08C09H091H092122.5°122.3°
C09N08C23H231111.6°120.6°
C09C10N11C12160.7°58.5°
C09C10N11C1420.4°121.2°
C09C10N11C22117.7°112.2°
C09C10N11H101122.4°123.9°
C09C10C22H101118.2°118.1°
C09C10C22C2321.9°35.5°
C10C09N08C07166.3°155.9°
C10C09N08C2317.3°24.1°
C09C10C22H22297.7°153.9°
C09C10C22H221141.5°83.0°
C10C09H091H092122.5°122.3°
N13C12N11H121180.0°179.7°
N13C12N11C140.7°0.2°
C12N13C15C140.4°0.4°
C12N13C15C16179.2°179.9°
N13C12N11C10179.7°180.0°
C12N11C14C10179.0°179.8°
C12N11C14C150.9°0.0°
C12N11C10C2281.5°53.7°
N11C12N13C150.2°0.4°
C12N11C14N20179.1°180.0°
C12N11C10H10138.4°177.6°
N11C14C15N20180.0°180.0°
N11C14C15C16179.8°180.0°
N11C14N20C18179.6°180.0°
C14N11C10C2297.3°126.6°
N11C14C15N130.8°0.2°
C14N11C10H101142.8°2.7°
C14N11C12H121179.4°180.0°
C14C15C16N13178.7°179.6°
C15C14N20C180.4°0.0°
C14C15C16N170.4°0.0°
C14C15C16O21179.4°180.0°
C15C14N11C10179.9°179.8°
C15C16N17C180.0°0.0°
C15C16N17O21179.8°180.0°
C16C15C14N200.2°0.0°
C15C16N17H171180.0°180.0°
N17C18N19N20179.6°180.0°
C18N17C16H171180.0°180.0°
C18N17C16O21179.8°180.0°
N17C18N20C140.9°0.0°
N17C18N19H192179.6°0.0°
N17C18N19H1910.4°180.0°
N19C18N17C16179.7°180.0°
N19C18N20C14179.5°180.0°
N19C18N17H1710.3°0.1°
C18N19H192H191180.0°179.9°
N20C18N17C160.6°0.0°
N20C18N17H171179.3°180.0°
N20C18N19H1920.0°180.0°
N20C18N19H191180.0°0.1°
N17C16C15N13179.1°179.7°
O21C16C15N130.7°0.3°
O21C16N17H1710.2°0.0°
N11C10C22H101117.4°123.9°
N11C10C22C23146.3°82.6°
C10N11C14N200.1°0.2°
N11C10C22H22226.7°35.8°
N11C10C22H22194.1°158.9°
N11C10C09H09122.5°160.1°
N11C10C09H09299.2°37.8°
C10N11C12H1210.3°0.3°
C10C22C23H222119.6°118.4°
C10C22C23H221119.6°118.4°
C10C22C23C24112.5°141.6°
C10C22C23N0811.7°22.2°
C10C22H222H221121.1°123.1°
C22C10C09H09193.7°81.9°
C22C10C09H092144.6°155.8°
C10C22C23H231131.2°97.4°
C22C23C24N08120.4°117.8°
C22C23C24H231115.3°121.0°
C22C23C24O254.0°175.0°
C22C23N08C07178.5°178.9°
C22C23N08H231116.8°119.5°
C23C22C10H10196.3°153.6°
C23C22H222H221121.2°123.3°
C22C23C24H241124.6°55.0°
C22C23C24H242116.7°65.0°
C23C24O25H241120.7°119.9°
C23C24O25H242120.7°120.0°
C23C24O25C26124.0°180.0°
C24C23N08C0758.0°61.6°
C24C23N08H231122.7°121.1°
C24C23C22H222127.9°100.0°
C24C23C22H2217.1°23.2°
C23C24H241H242117.9°119.9°
C24O25C26C27137.8°180.0°
O25C24C23N08116.5°67.2°
O25C24H241H242117.9°120.1°
C24O25C26H262103.1°60.0°
C24O25C26H26118.8°60.0°
O25C24C23H231119.3°54.0°
O25C26C27H262119.0°120.0°
O25C26C27H261119.1°120.0°
O25C26C27P28125.5°180.0°
C26O25C24H241115.3°60.0°
C26O25C24H2423.3°60.0°
O25C26H262H261122.7°120.0°
O25C26C27H271113.3°60.0°
O25C26C27H2724.4°60.0°
C26C27P28H271121.2°120.0°
C26C27P28H272121.2°120.0°
C26C27P28O293.2°55.0°
C26C27P28O30120.1°175.0°
C26C27P28O31122.9°65.0°
C27C26H262H261122.7°120.0°
C26C27H271H272116.4°120.0°
C27P28O29O30117.1°120.0°
C27P28O29O31119.7°120.0°
C27P28O30O31114.5°120.0°
P28C27C26H2626.5°60.0°
P28C27C26H261115.4°60.0°
P28C27H271H272116.3°120.0°
C27P28O30H3124.2°180.0°
C27P28O31H4124.2°60.0°
O29P28O30O31121.3°120.0°
O29P28C27H271124.4°65.0°
O29P28C27H272117.9°174.9°
O29P28O30H30.0°60.0°
O29P28O31H40.0°180.0°
O30P28C27H2711.1°55.0°
O30P28C27H272118.8°65.1°
O30P28O31H4124.6°60.0°
O31P28C27H271115.9°175.0°
O31P28C27H2721.8°54.9°
O31P28O30H3121.3°60.0°
N08C07C06H06175.9°60.0°
N08C07C06H06244.8°60.0°
C07N08C09H09174.5°85.3°
C07N08C09H09247.2°37.1°
C07N08C23H23164.7°59.5°
O32C07N08C23178.4°0.0°
O32C07C06H061103.3°120.0°
O32C07C06H062136.0°120.0°
N08C23C22H222107.9°140.6°
N08C23C22H221131.3°96.2°
N08C23C24H2414.2°172.8°
N08C23C24H242122.9°52.8°
C23N08C09H091101.8°94.7°
C23N08C09H092136.5°143.0°
N13C15C14N20179.2°179.8°
C15N13C12H121179.9°179.9°
H101C10C22H222144.1°88.0°
H101C10C22H22123.3°35.1°
H101C10C09H091145.2°36.2°
H101C10C09H09223.5°86.1°
H222C22C23H23111.6°21.0°
H221C22C23H231109.2°144.2°
H241C24C23H231120.0°66.0°
H242C24C23H2311.4°174.0°
H262C26C27H271127.6°60.0°
H262C26C27H272114.7°180.0°
H261C26C27H2715.7°180.0°
H261C26C27H272123.4°60.0°
H051C05C06H06183.4°59.9°
H051C05C06H062155.9°180.0°
H052C05C06H06135.3°180.0°
H052C05C06H06285.4°59.9°

250835

PDB entries from 2026-03-18

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