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JDN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O03B02sing1.42Å1.41Å
O01B02sing1.42Å1.42Å
B02C04sing1.57Å1.63Å
C04C09doub1.40Å1.40ÅAromatic
C04C05sing1.39Å1.40ÅAromatic
C09C08sing1.36Å1.38ÅAromatic
C05C06doub1.39Å1.42ÅAromatic
C08C07doub1.39Å1.43ÅAromatic
C06C07sing1.41Å1.38ÅAromatic
C06C12sing1.47Å1.44ÅAromatic
C07N10sing1.37Å1.37ÅAromatic
C12C11doub1.34Å1.39ÅAromatic
N10C11sing1.37Å1.33ÅAromatic
O01H1sing0.97Å0.95Å
O03H2sing0.97Å0.95Å
C05H3sing1.08Å1.08Å
C08H4sing1.08Å1.08Å
C09H5sing1.08Å1.08Å
N10H6sing0.97Å1.00Å
C11H7sing1.08Å1.08Å
C12H8sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O03B02O01117.6°120.0°
O03B02C04115.6°120.0°
B02O03H2109.5°114.0°
O01B02C04115.7°120.0°
B02O01H1109.5°114.0°
B02C04C09118.8°120.0°
B02C04C05119.9°120.0°
C09C04C05121.3°120.1°
C04C09C08120.0°120.7°
C04C09H5120.0°119.7°
C04C05C06118.7°119.4°
C04C05H3120.6°120.2°
C09C08C07119.3°120.2°
C09C08H4120.3°119.9°
C08C09H5120.0°119.6°
C05C06C07120.0°120.0°
C05C06C12134.6°134.0°
C06C05H3120.7°120.3°
C08C07C06120.7°119.6°
C08C07N10130.5°133.3°
C07C08H4120.4°119.9°
C07C06C12105.3°106.0°
C06C07N10108.8°107.1°
C06C12C11107.4°106.9°
C06C12H8126.3°126.5°
C07N10C11110.5°110.0°
C07N10H6124.8°125.0°
C12C11N10107.9°109.9°
C12C11H7126.1°125.1°
C11C12H8126.3°126.5°
C11N10H6124.7°125.0°
N10C11H7126.0°125.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O03B02O01C04142.5°179.9°
O03B02C04C0917.3°180.0°
O03B02C04C05160.9°0.3°
O03B02O01H1180.0°0.1°
O01B02C04C09160.6°0.0°
O01B02C04C0517.7°179.8°
O01B02O03H2180.0°0.1°
B02C04C09C05178.3°179.7°
B02C04C09C08179.0°179.8°
B02C04C05C06179.0°180.0°
C04B02O01H137.5°180.0°
C04B02O03H237.4°180.0°
B02C04C05H31.1°0.1°
B02C04C09H51.0°0.0°
C04C09C08H5180.0°179.8°
C09C04C05C060.7°0.2°
C04C09C08C070.3°0.5°
C09C04C05H3179.3°179.8°
C04C09C08H4179.7°179.7°
C05C04C09C080.7°0.5°
C04C05C06H3180.0°180.0°
C04C05C06C070.4°0.0°
C04C05C06C12179.7°180.0°
C05C04C09H5179.3°179.7°
C09C08C07H4180.0°179.8°
C09C08C07C060.1°0.2°
C09C08C07N10179.8°179.8°
C05C06C07C080.1°0.0°
C05C06C07C12180.0°180.0°
C05C06C07N10179.8°180.0°
C05C06C12C11180.0°180.0°
C05C06C12H80.0°0.1°
C08C07C06N10179.8°180.0°
C08C07C06C12179.9°180.0°
C08C07N10C11180.0°180.0°
C07C08C09H5179.7°179.7°
C08C07N10H60.0°0.0°
C07C06C12C110.0°0.0°
C06C07N10C110.3°0.0°
C07C06C05H3179.7°180.0°
C06C07C08H4179.9°180.0°
C06C07N10H6179.7°180.0°
C07C06C12H8179.9°180.0°
C12C06C07N100.1°0.0°
C06C12C11H8180.0°180.0°
C06C12C11N100.2°0.0°
C12C06C05H30.3°0.0°
C06C12C11H7179.8°180.0°
C07N10C11C120.3°0.0°
C07N10C11H6180.0°180.0°
N10C07C08H40.2°0.0°
C07N10C11H7179.7°180.0°
C12C11N10H7180.0°180.0°
C12C11N10H6179.7°180.0°
N10C11C12H8179.8°180.0°
H4C08C09H50.3°0.1°
H6N10C11H70.3°0.0°
H7C11C12H80.2°0.1°

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PDB entries from 2024-10-09

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