Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

JDA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N4C13sing1.34Å1.36ÅAromatic
N4N5doub1.29Å1.31ÅAromatic
C13C12doub1.35Å1.35ÅAromatic
N5N3sing1.29Å1.35ÅAromatic
C12N3sing1.36Å1.36ÅAromatic
N3C9sing1.40Å1.43Å
C9C8doub1.39Å1.39ÅAromatic
C9C10sing1.39Å1.39ÅAromatic
C8C7sing1.38Å1.38ÅAromatic
C10C11doub1.38Å1.38ÅAromatic
C7C6doub1.38Å1.39ÅAromatic
C16C17doub1.38Å1.37ÅAromatic
C16C15sing1.38Å1.38ÅAromatic
C17C18sing1.38Å1.38ÅAromatic
C11C6sing1.38Å1.39ÅAromatic
C6C5sing1.51Å1.51Å
C15C14doub1.39Å1.40ÅAromatic
C5N2sing1.46Å1.45Å
C18C19doub1.38Å1.39ÅAromatic
C14C19sing1.39Å1.41ÅAromatic
C14C3sing1.48Å1.48Å
N1C3doub1.33Å1.34ÅAromatic
N1C4sing1.33Å1.34ÅAromatic
C19C20sing1.51Å1.52Å
N2C4sing1.39Å1.34Å
C3Nsing1.33Å1.34ÅAromatic
C4C1doub1.40Å1.41ÅAromatic
C20C21sing1.53Å1.53Å
C20C22sing1.53Å1.52Å
NC2doub1.32Å1.33ÅAromatic
C1C2sing1.38Å1.38ÅAromatic
C1Csing1.51Å1.51Å
CH1sing1.09Å1.10Å
CH2sing1.09Å1.10Å
CH3sing1.09Å1.10Å
C10H4sing1.08Å1.08Å
C11H5sing1.08Å1.08Å
C12H6sing1.08Å1.08Å
C13H7sing1.08Å1.08Å
C15H8sing1.08Å1.08Å
C16H9sing1.08Å1.08Å
C17H10sing1.08Å1.08Å
C18H11sing1.08Å1.08Å
C2H12sing1.08Å1.08Å
C20H13sing1.09Å1.10Å
C21H14sing1.09Å1.10Å
C21H15sing1.09Å1.10Å
C21H16sing1.09Å1.10Å
C22H17sing1.09Å1.10Å
C22H18sing1.09Å1.10Å
C22H19sing1.09Å1.10Å
C5H20sing1.09Å1.10Å
C5H21sing1.09Å1.10Å
C7H22sing1.08Å1.08Å
C8H23sing1.08Å1.08Å
N2H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C13N4N5109.2°109.0°
N4C13C12109.0°106.5°
N4C13H7125.5°126.7°
N4N5N3106.4°110.3°
C13C12N3104.7°106.0°
C13C12H6127.6°127.0°
C12C13H7125.5°126.8°
N5N3C12110.7°108.1°
N5N3C9120.5°126.0°
C12N3C9128.7°125.9°
N3C12H6127.6°127.0°
N3C9C8120.3°120.0°
N3C9C10120.0°120.1°
C8C9C10119.7°119.9°
C9C8C7119.9°119.9°
C9C8H23120.1°120.0°
C9C10C11119.9°119.9°
C9C10H4120.1°120.0°
C8C7C6121.1°120.1°
C8C7H22119.5°119.9°
C7C8H23120.0°120.1°
C10C11C6121.2°120.1°
C11C10H4120.1°120.0°
C10C11H5119.4°120.0°
C7C6C11118.3°120.1°
C7C6C5121.0°120.0°
C6C7H22119.4°120.0°
C17C16C15120.2°120.1°
C16C17C18120.1°120.3°
C17C16H9119.9°120.0°
C16C17H10120.0°119.8°
C16C15C14120.8°119.9°
C16C15H8119.6°120.1°
C15C16H9119.9°120.0°
C17C18C19120.6°120.1°
C18C17H10119.9°119.9°
C17C18H11119.7°119.9°
C11C6C5120.7°119.9°
C6C11H5119.4°119.9°
C6C5N2113.2°109.4°
C6C5H20108.6°109.5°
C6C5H21108.5°109.5°
C15C14C19118.7°119.7°
C15C14C3117.9°120.1°
C14C15H8119.6°120.0°
C5N2C4122.8°120.0°
N2C5H20108.5°109.5°
N2C5H21108.5°109.5°
C5N2H24106.1°120.0°
C18C19C14119.5°119.9°
C18C19C20118.9°120.1°
C19C18H11119.7°120.0°
C19C14C3123.4°120.2°
C14C19C20121.6°120.0°
C14C3N1117.1°119.2°
C14C3N117.2°119.1°
C3N1C4116.9°120.6°
N1C3N125.7°121.7°
N1C4N2117.8°120.5°
N1C4C1122.2°119.1°
C19C20C21111.8°109.5°
C19C20C22111.5°109.4°
C19C20H13107.7°109.5°
N2C4C1120.0°120.5°
C4N2H24106.0°120.0°
C3NC2115.9°120.9°
C4C1C2114.9°118.5°
C4C1C123.1°120.8°
C21C20C22110.4°109.5°
C21C20H13107.6°109.5°
C20C21H14109.5°109.5°
C20C21H15109.5°109.5°
C20C21H16109.5°109.4°
C22C20H13107.6°109.5°
C20C22H17109.5°109.5°
C20C22H18109.5°109.5°
C20C22H19109.4°109.5°
NC2C1124.3°119.3°
NC2H12117.8°120.3°
C2C1C122.0°120.7°
C1C2H12117.8°120.3°
C1CH1109.5°109.5°
C1CH2109.5°109.5°
C1CH3109.5°109.5°
H1CH2109.4°109.4°
H1CH3109.5°109.5°
H2CH3109.5°109.5°
H14C21H15109.4°109.5°
H14C21H16109.5°109.5°
H15C21H16109.5°109.5°
H17C22H18109.5°109.5°
H17C22H19109.5°109.5°
H18C22H19109.5°109.4°
H20C5H21109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N4C13C12H7180.0°179.9°
C13N4N5N30.2°0.4°
N4C13C12N30.3°0.0°
N4C13C12H6179.7°179.6°
N5N4C13C120.1°0.3°
N4N5N3C120.5°0.4°
N4N5N3C9176.9°179.6°
N5N4C13H7179.9°179.8°
C13C12N3N50.5°0.2°
C13C12N3H6180.0°179.7°
C13C12N3C9176.6°179.8°
N5N3C12C9177.1°180.0°
N5N3C9C822.6°0.0°
N5N3C9C10155.1°179.5°
N5N3C12H6179.5°179.9°
C12N3C9C8160.5°180.0°
C12N3C9C1021.8°0.5°
N3C12C13H7179.6°180.0°
N3C9C8C10177.7°179.6°
N3C9C8C7177.2°179.9°
N3C9C10C11177.2°179.9°
N3C9C10H42.9°0.2°
C9N3C12H63.4°0.1°
N3C9C8H232.8°0.2°
C9C8C7H23180.0°179.7°
C8C9C10C110.6°0.6°
C9C8C7C60.1°0.2°
C8C9C10H4179.4°179.8°
C9C8C7H22179.9°179.8°
C10C9C8C70.6°0.5°
C9C10C11H4180.0°179.7°
C9C10C11C60.1°0.3°
C9C10C11H5179.9°179.8°
C10C9C8H23179.4°179.8°
C8C7C6H22180.0°180.0°
C8C7C6C110.4°0.0°
C8C7C6C5179.6°180.0°
C10C11C6C70.4°0.1°
C10C11C6H5180.0°179.9°
C10C11C6C5179.6°179.9°
C7C6C11C5180.0°180.0°
C7C6C5N2110.8°90.0°
C7C6C11H5179.6°180.0°
C7C6C5H20128.7°30.0°
C7C6C5H219.8°150.0°
C6C7C8H23179.9°180.0°
C17C16C15H9180.0°180.0°
C16C17C18H10180.0°179.9°
C17C16C15C140.1°0.0°
C16C17C18C190.2°0.1°
C17C16C15H8179.9°180.0°
C16C17C18H11179.8°179.9°
C15C16C17C180.1°0.1°
C16C15C14H8180.0°180.0°
C16C15C14C190.2°0.0°
C16C15C14C3179.5°179.8°
C15C16C17H10179.9°180.0°
C17C18C19H11180.0°179.9°
C17C18C19C140.4°0.0°
C17C18C19C20178.9°179.7°
C18C17C16H9179.9°180.0°
C11C6C5N269.2°90.0°
C6C11C10H4179.9°180.0°
C11C6C5H2051.3°150.0°
C11C6C5H21170.2°30.0°
C11C6C7H22179.6°180.0°
C6C5N2H20120.6°120.0°
C6C5N2H21120.6°120.0°
C6C5N2C495.4°180.0°
C5C6C11H50.4°0.0°
C6C5H20H21118.3°120.0°
C5C6C7H220.4°0.0°
C6C5N2H2426.4°0.0°
C15C14C19C180.4°0.0°
C15C14C19C3179.2°179.8°
C15C14C3N152.0°49.9°
C15C14C19C20178.9°179.7°
C15C14C3N126.9°130.1°
C14C15C16H9179.9°180.0°
C5N2C4N10.5°0.0°
C5N2C4H24121.9°179.9°
C5N2C4C1179.5°180.0°
N2C5H20H21118.3°120.0°
C18C19C14C20179.3°179.7°
C18C19C14C3179.6°179.8°
C18C19C20C2168.6°54.4°
C18C19C20C2255.6°65.6°
C19C18C17H10179.8°180.0°
C18C19C20H13173.4°174.4°
C19C14C3N1127.2°130.3°
C19C14C3N54.0°49.7°
C14C19C20C21110.7°125.9°
C14C19C20C22125.1°114.1°
C19C14C15H8179.7°180.0°
C14C19C18H11179.7°179.9°
C14C19C20H137.3°5.9°
C14C3N1N178.8°180.0°
C14C3N1C4179.0°180.0°
C3C14C19C200.3°0.1°
C14C3NC2179.3°180.0°
C3C14C15H80.5°0.2°
C3N1C4N2179.5°180.0°
C3N1C4C10.5°0.1°
N1C3NC20.5°0.0°
N1C4N2C1179.9°180.0°
C4N1C3N0.2°0.0°
N1C4C1C20.8°0.0°
N1C4C1C178.3°180.0°
N1C4N2H24122.3°180.0°
C19C20C21C22124.7°120.0°
C19C20C21H13118.1°120.0°
C19C20C22H13117.9°120.0°
C20C19C18H111.0°0.4°
C19C20C21H14180.0°179.9°
C19C20C21H1560.0°60.0°
C19C20C21H1660.0°60.0°
C19C20C22H17180.0°60.0°
C19C20C22H1860.0°180.0°
C19C20C22H1960.0°60.0°
N2C4C1C2179.2°180.0°
N2C4C1C1.7°0.1°
C4N2C5H20144.0°60.1°
C4N2C5H2125.1°60.0°
C3NC2C10.1°0.0°
C3NC2H12179.9°180.0°
C4C1C2N0.5°0.0°
C4C1C2C179.1°179.9°
C4C1CH189.5°89.9°
C4C1CH2150.5°30.0°
C4C1CH330.5°150.0°
C4C1C2H12179.5°180.0°
C1C4N2H2457.6°0.1°
C21C20C22H13117.2°120.0°
C20C21H14H15120.0°120.0°
C20C21H14H16120.0°119.9°
C20C21H15H16120.0°119.9°
C21C20C22H1755.2°180.0°
C21C20C22H1864.9°60.0°
C21C20C22H19175.1°60.0°
C22C20C21H1455.3°60.0°
C22C20C21H15175.3°179.9°
C22C20C21H1664.7°60.0°
C20C22H17H18120.0°120.0°
C20C22H17H19120.0°120.0°
C20C22H18H19120.0°120.0°
NC2C1H12180.0°180.0°
NC2C1C178.7°179.9°
C2C1CH189.5°90.0°
C2C1CH230.5°150.0°
C2C1CH3150.4°30.0°
C1CH1H2120.0°120.0°
C1CH1H3120.0°120.0°
C1CH2H3120.0°120.0°
CC1C2H121.3°0.1°
H1CH2H3120.0°120.0°
H4C10C11H50.1°0.1°
H6C12C13H70.4°0.3°
H8C15C16H90.1°0.0°
H9C16C17H100.1°0.0°
H10C17C18H110.2°0.1°
H13C20C21H1461.9°60.1°
H13C20C21H1558.1°60.0°
H13C20C21H16178.1°180.0°
H13C20C22H1762.1°60.0°
H13C20C22H18177.9°60.0°
H13C20C22H1957.9°180.0°
H14C21H15H16120.0°120.0°
H17C22H18H19120.0°120.0°
H20C5N2H2494.1°120.0°
H21C5N2H24147.0°120.0°
H22C7C8H230.1°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon