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SummaryGeometryRelated PDB entries

JAF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAAOANsing1.43Å1.42Å
OANCARsing1.36Å1.39Å
CARCAHdoub1.39Å1.41ÅAromatic
CARCAGsing1.39Å1.39ÅAromatic
CAHCAJsing1.38Å1.39ÅAromatic
CAGCAIdoub1.38Å1.38ÅAromatic
CAJCASdoub1.38Å1.40ÅAromatic
CAICASsing1.38Å1.39ÅAromatic
CASSAUsing1.76Å1.67Å
OADSAUdoub1.42Å1.56Å
SAUOAEdoub1.42Å1.54Å
SAUNAMsing1.66Å1.77Å
CACCAPsing1.51Å1.41Å
NAMCATsing1.40Å1.36Å
CAPCATdoub1.39Å1.41ÅAromatic
CAPCALsing1.38Å1.40ÅAromatic
CATCAOsing1.39Å1.41ÅAromatic
CALCAQdoub1.39Å1.40ÅAromatic
CAOCABsing1.51Å1.44Å
CAOCAKdoub1.38Å1.40ÅAromatic
CAQCAKsing1.39Å1.40ÅAromatic
CAQOAFsing1.36Å1.35Å
CABH1sing1.09Å1.10Å
CABH2sing1.09Å1.10Å
CABH3sing1.09Å1.10Å
CAKH4sing1.08Å1.08Å
OAFH5sing0.97Å0.95Å
CALH6sing1.08Å1.08Å
CACH7sing1.09Å1.10Å
CACH8sing1.09Å1.10Å
CACH9sing1.09Å1.10Å
NAMH10sing0.97Å1.00Å
CAIH11sing1.08Å1.08Å
CAGH12sing1.08Å1.08Å
CAAH13sing1.09Å1.10Å
CAAH14sing1.09Å1.10Å
CAAH15sing1.09Å1.10Å
CAHH16sing1.08Å1.08Å
CAJH17sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAAOANCAR117.9°117.0°
OANCAAH13109.5°109.5°
OANCAAH14109.4°109.5°
OANCAAH15109.5°109.4°
OANCARCAH126.0°120.1°
OANCARCAG114.1°120.1°
CAHCARCAG119.8°119.9°
CARCAHCAJ119.6°120.0°
CARCAHH16120.2°120.0°
CARCAGCAI121.3°120.0°
CARCAGH12119.4°120.1°
CAHCAJCAS119.1°120.1°
CAJCAHH16120.2°120.0°
CAHCAJH17120.5°120.0°
CAGCAICAS118.1°120.0°
CAGCAIH11120.9°120.0°
CAICAGH12119.3°120.0°
CAJCASCAI122.1°120.1°
CAJCASSAU121.1°120.0°
CASCAJH17120.5°119.9°
CAICASSAU116.8°119.9°
CASCAIH11120.9°120.0°
CASSAUOAD106.4°106.5°
CASSAUOAE108.1°106.4°
CASSAUNAM106.7°107.2°
OADSAUOAE112.4°123.1°
OADSAUNAM114.8°106.5°
OAESAUNAM108.1°106.4°
SAUNAMCAT118.3°120.0°
SAUNAMH10107.2°120.0°
CACCAPCAT120.9°120.0°
CACCAPCAL119.8°120.0°
CAPCACH7109.5°109.5°
CAPCACH8109.5°109.5°
CAPCACH9109.4°109.5°
NAMCATCAP119.0°119.9°
NAMCATCAO118.9°120.1°
CATNAMH10107.2°120.0°
CATCAPCAL119.3°119.9°
CAPCATCAO122.1°120.0°
CAPCALCAQ119.3°120.0°
CAPCALH6120.3°120.0°
CATCAOCAB124.2°120.0°
CATCAOCAK116.9°120.0°
CALCAQCAK120.4°120.0°
CALCAQOAF122.6°120.0°
CAQCALH6120.3°120.0°
CABCAOCAK118.9°120.0°
CAOCABH1109.5°109.5°
CAOCABH2109.4°109.5°
CAOCABH3109.5°109.5°
CAOCAKCAQ121.9°120.1°
CAOCAKH4119.0°120.0°
CAKCAQOAF116.9°120.0°
CAQCAKH4119.0°120.0°
CAQOAFH5109.5°114.0°
H1CABH2109.5°109.4°
H1CABH3109.5°109.5°
H2CABH3109.5°109.5°
H7CACH8109.4°109.4°
H7CACH9109.5°109.5°
H8CACH9109.5°109.5°
H13CAAH14109.5°109.5°
H13CAAH15109.5°109.4°
H14CAAH15109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAAOANCARCAH8.5°180.0°
CAAOANCARCAG173.3°0.3°
OANCAAH13H14120.0°120.1°
OANCAAH13H15120.0°119.9°
OANCAAH14H15120.0°119.9°
OANCARCAHCAG178.0°179.7°
OANCARCAHCAJ179.3°180.0°
OANCARCAGCAI179.6°179.8°
OANCARCAGH120.5°0.2°
CAROANCAAH13180.0°59.9°
CAROANCAAH1460.0°180.0°
CAROANCAAH1560.0°60.0°
OANCARCAHH160.6°0.3°
CARCAHCAJH16180.0°179.7°
CAHCARCAGCAI1.3°0.0°
CARCAHCAJCAS0.7°0.6°
CAHCARCAGH12178.7°179.9°
CARCAHCAJH17179.3°179.9°
CAGCARCAHCAJ1.3°0.3°
CARCAGCAIH12180.0°180.0°
CARCAGCAICAS0.7°0.1°
CARCAGCAIH11179.4°180.0°
CAGCARCAHH16178.7°180.0°
CAHCAJCASH17180.0°179.5°
CAHCAJCASCAI0.1°0.6°
CAHCAJCASSAU179.9°179.7°
CAGCAICASCAJ0.0°0.3°
CAGCAICASH11180.0°179.9°
CAGCAICASSAU179.9°180.0°
CAJCASCAISAU179.8°179.7°
CAJCASSAUOAD41.2°151.1°
CAJCASSAUOAE162.2°18.2°
CAJCASSAUNAM81.8°95.3°
CAJCASCAIH11180.0°179.7°
CASCAJCAHH16179.3°179.7°
CAICASSAUOAD138.7°28.6°
CAICASSAUOAE17.7°161.5°
CAICASSAUNAM98.4°85.0°
CASCAICAGH12179.4°179.9°
CAICASCAJH17179.9°179.9°
CASSAUOADOAE118.2°122.9°
CASSAUOADNAM117.8°114.1°
CASSAUOAENAM115.1°114.1°
CASSAUNAMCAT64.6°66.2°
CASSAUNAMH1056.7°113.9°
SAUCASCAIH110.1°0.0°
SAUCASCAJH170.1°0.2°
OADSAUOAENAM127.7°123.0°
OADSAUNAMCAT177.8°179.8°
OADSAUNAMH1061.0°0.3°
OAESAUNAMCAT51.5°47.3°
OAESAUNAMH10172.7°132.6°
SAUNAMCATH10121.2°179.9°
SAUNAMCATCAP96.0°110.3°
SAUNAMCATCAO83.5°69.2°
CACCAPCATNAM0.8°0.5°
CACCAPCATCAL179.6°179.5°
CACCAPCATCAO179.7°180.0°
CACCAPCALCAQ178.7°179.7°
CACCAPCALH61.3°0.2°
CAPCACH7H8120.0°120.0°
CAPCACH7H9120.0°120.0°
CAPCACH8H9120.0°120.0°
NAMCATCAPCAO179.5°179.5°
NAMCATCAPCAL179.6°180.0°
NAMCATCAOCAB0.2°0.2°
NAMCATCAOCAK179.9°179.9°
CATCAPCALCAQ0.9°0.3°
CAPCATCAOCAB179.7°179.7°
CAPCATCAOCAK0.6°0.5°
CATCAPCALH6179.2°179.7°
CATCAPCACH789.8°90.0°
CATCAPCACH8150.2°150.0°
CATCAPCACH930.2°30.0°
CAPCATNAMH1025.2°69.8°
CALCAPCATCAO0.1°0.5°
CAPCALCAQH6180.0°180.0°
CAPCALCAQCAK1.4°0.0°
CAPCALCAQOAF177.9°180.0°
CALCAPCACH789.8°90.5°
CALCAPCACH830.2°29.5°
CALCAPCACH9150.2°149.5°
CATCAOCABCAK179.7°179.8°
CATCAOCAKCAQ0.1°0.2°
CATCAOCABH190.2°96.4°
CATCAOCABH2149.9°23.6°
CATCAOCABH329.8°143.6°
CATCAOCAKH4179.9°179.7°
CAOCATNAMH10155.2°110.7°
CALCAQCAKCAO0.9°0.1°
CALCAQCAKOAF176.8°180.0°
CALCAQCAKH4179.1°180.0°
CALCAQOAFH5180.0°90.0°
CABCAOCAKCAQ179.9°180.0°
CAOCABH1H2120.0°120.0°
CAOCABH1H3120.0°120.0°
CAOCABH2H3120.0°120.0°
CABCAOCAKH40.2°0.1°
CAOCAKCAQH4180.0°179.9°
CAOCAKCAQOAF177.6°180.0°
CAKCAOCABH190.1°83.8°
CAKCAOCABH229.9°156.2°
CAKCAOCABH3149.9°36.2°
CAKCAQOAFH53.3°90.0°
CAKCAQCALH6178.7°180.0°
OAFCAQCAKH42.3°0.1°
OAFCAQCALH62.1°0.0°
H1CABH2H3120.0°120.0°
H7CACH8H9120.0°120.0°
H11CAICAGH120.6°0.0°
H13CAAH14H15120.0°120.0°
H16CAHCAJH170.7°0.2°

222415

PDB entries from 2024-07-10

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