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SummaryGeometryRelated PDB entries

J9N

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N11N10sing1.40Å1.34ÅAromatic
N11C02sing1.36Å1.34ÅAromatic
N10C04doub1.32Å1.33ÅAromatic
C02N01sing1.39Å1.42Å
C02C03doub1.36Å1.39ÅAromatic
C04C03sing1.41Å1.39ÅAromatic
C04C05sing1.48Å1.37Å
C05C09doub1.35Å1.40ÅAromatic
C05S06sing1.76Å1.72ÅAromatic
C09C08sing1.38Å1.39ÅAromatic
S06C07sing1.76Å1.72ÅAromatic
C08C07doub1.34Å1.39ÅAromatic
N01H1sing0.97Å1.00Å
N01H2sing0.97Å1.00Å
C03H3sing1.08Å1.08Å
C07H4sing1.08Å1.08Å
C08H5sing1.08Å1.08Å
C09H6sing1.08Å1.08Å
N11H7sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N10N11C02110.0°108.1°
N11N10C04108.5°108.3°
N10N11H7125.0°126.0°
N11C02N01123.5°126.2°
N11C02C03107.3°107.7°
C02N11H7125.0°125.9°
N10C04C03108.6°108.1°
N10C04C05124.1°125.9°
N01C02C03129.2°126.2°
C02N01H1109.5°120.0°
C02N01H2109.4°120.0°
C02C03C04105.6°107.8°
C02C03H3127.2°126.1°
C03C04C05127.3°126.0°
C04C03H3127.2°126.1°
C04C05C09127.5°125.2°
C04C05S06124.5°125.3°
C09C05S06108.0°109.5°
C05C09C08113.0°114.7°
C05C09H6123.5°122.7°
C05S06C0796.1°91.0°
C09C08C07116.4°115.0°
C09C08H5121.8°122.5°
C08C09H6123.5°122.6°
S06C07C08106.4°109.7°
S06C07H4126.8°125.2°
C08C07H4126.8°125.1°
C07C08H5121.8°122.4°
H1N01H2109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N10N11C02H7180.0°179.6°
N10N11C02N01179.8°179.9°
N10N11C02C030.1°0.4°
N11N10C04C030.6°0.2°
N11N10C04C05178.4°179.8°
C02N11N10C040.3°0.4°
N11C02N01C03179.6°179.6°
N11C02C03C040.4°0.2°
N11C02N01H1180.0°179.7°
N11C02N01H260.0°0.6°
N11C02C03H3179.6°179.8°
N10C04C03C020.6°0.0°
N10C04C03C05177.7°180.0°
N10C04C05C097.3°0.1°
N10C04C05S06175.5°179.7°
N10C04C03H3179.4°180.0°
C04N10N11H7179.7°180.0°
N01C02C03C04179.9°179.9°
C02N01H1H2120.0°179.7°
N01C02C03H30.1°0.1°
N01C02N11H70.3°0.3°
C02C03C04H3180.0°180.0°
C02C03C04C05178.3°180.0°
C03C02N01H10.4°0.0°
C03C02N01H2120.4°179.7°
C03C02N11H7179.9°180.0°
C03C04C05C09170.1°180.0°
C03C04C05S067.1°0.4°
C04C05C09S06177.6°179.7°
C04C05C09C08178.4°179.8°
C04C05S06C07177.7°179.9°
C05C04C03H31.7°0.0°
C04C05C09H61.6°0.0°
C05C09C08H6180.0°179.8°
C09C05S06C070.0°0.2°
C05C09C08C071.6°0.5°
C05C09C08H5178.4°179.8°
S06C05C09C080.8°0.5°
C05S06C07C080.8°0.0°
C05S06C07H4179.2°180.0°
S06C05C09H6179.2°179.7°
C09C08C07S061.5°0.3°
C09C08C07H5180.0°179.7°
C09C08C07H4178.5°179.8°
S06C07C08H4180.0°179.9°
S06C07C08H5178.5°180.0°
C07C08C09H6178.4°179.7°
H4C07C08H51.4°0.0°
H5C08C09H61.6°0.0°

248636

PDB entries from 2026-02-04

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