J8D
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | C4 | sing | 1.36Å | 1.35Å | |
O3 | C7 | doub | 1.22Å | 1.23Å | |
C4 | C3 | doub | 1.38Å | 1.39Å | Aromatic |
C4 | C5 | sing | 1.40Å | 1.40Å | Aromatic |
C3 | C2 | sing | 1.39Å | 1.39Å | Aromatic |
C7 | C5 | sing | 1.47Å | 1.41Å | |
C7 | C8 | sing | 1.42Å | 1.39Å | |
C5 | C6 | doub | 1.40Å | 1.40Å | Aromatic |
C2 | O1 | sing | 1.36Å | 1.36Å | |
C2 | C1 | doub | 1.39Å | 1.39Å | Aromatic |
C8 | C9 | doub | 1.36Å | 1.40Å | |
C6 | C1 | sing | 1.39Å | 1.39Å | Aromatic |
C6 | O4 | sing | 1.35Å | 1.37Å | |
C9 | O4 | sing | 1.34Å | 1.37Å | |
C9 | C10 | sing | 1.48Å | 1.40Å | |
C10 | C15 | doub | 1.40Å | 1.41Å | Aromatic |
C10 | C11 | sing | 1.40Å | 1.40Å | Aromatic |
C15 | C14 | sing | 1.38Å | 1.40Å | Aromatic |
C11 | C12 | doub | 1.38Å | 1.39Å | Aromatic |
C14 | C13 | doub | 1.39Å | 1.40Å | Aromatic |
C12 | C13 | sing | 1.40Å | 1.40Å | Aromatic |
C12 | O5 | sing | 1.36Å | 1.36Å | |
C13 | O6 | sing | 1.36Å | 1.38Å | |
O6 | C01 | sing | 1.43Å | 1.44Å | |
C01 | H1 | sing | 1.09Å | 1.10Å | |
C01 | H2 | sing | 1.09Å | 1.10Å | |
C01 | H3 | sing | 1.09Å | 1.10Å | |
C11 | H4 | sing | 1.08Å | 1.08Å | |
O5 | H5 | sing | 0.97Å | 0.95Å | |
C14 | H6 | sing | 1.08Å | 1.08Å | |
C15 | H7 | sing | 1.08Å | 1.08Å | |
C1 | H8 | sing | 1.08Å | 1.08Å | |
O1 | H9 | sing | 0.97Å | 0.95Å | |
C3 | H10 | sing | 1.08Å | 1.08Å | |
O2 | H11 | sing | 0.97Å | 0.95Å | |
C8 | H12 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C4 | C3 | 119.6° | 120.3° |
O2 | C4 | C5 | 118.6° | 120.3° |
C4 | O2 | H11 | 109.5° | 114.1° |
O3 | C7 | C5 | 121.7° | 121.3° |
O3 | C7 | C8 | 118.3° | 121.3° |
C3 | C4 | C5 | 121.9° | 119.5° |
C4 | C3 | C2 | 120.1° | 120.2° |
C4 | C3 | H10 | 120.0° | 119.9° |
C4 | C5 | C7 | 123.1° | 121.3° |
C4 | C5 | C6 | 117.1° | 120.2° |
C3 | C2 | O1 | 119.5° | 119.7° |
C3 | C2 | C1 | 119.3° | 120.6° |
C2 | C3 | H10 | 119.9° | 119.9° |
C5 | C7 | C8 | 119.9° | 117.4° |
C7 | C5 | C6 | 119.8° | 118.5° |
C7 | C8 | C9 | 119.3° | 119.5° |
C7 | C8 | H12 | 120.4° | 120.3° |
C5 | C6 | C1 | 121.3° | 119.5° |
C5 | C6 | O4 | 119.3° | 119.8° |
O1 | C2 | C1 | 121.2° | 119.7° |
C2 | O1 | H9 | 109.5° | 114.0° |
C2 | C1 | C6 | 120.3° | 120.0° |
C2 | C1 | H8 | 119.9° | 120.0° |
C8 | C9 | O4 | 120.2° | 122.5° |
C8 | C9 | C10 | 124.8° | 118.7° |
C9 | C8 | H12 | 120.4° | 120.2° |
C1 | C6 | O4 | 119.4° | 120.8° |
C6 | C1 | H8 | 119.8° | 120.0° |
C6 | O4 | C9 | 121.5° | 122.3° |
O4 | C9 | C10 | 114.9° | 118.8° |
C9 | C10 | C15 | 122.2° | 120.1° |
C9 | C10 | C11 | 119.7° | 120.1° |
C15 | C10 | C11 | 118.1° | 119.8° |
C10 | C15 | C14 | 121.2° | 120.0° |
C10 | C15 | H7 | 119.4° | 120.0° |
C10 | C11 | C12 | 120.7° | 119.9° |
C10 | C11 | H4 | 119.7° | 120.0° |
C15 | C14 | C13 | 120.1° | 120.2° |
C15 | C14 | H6 | 119.9° | 119.9° |
C14 | C15 | H7 | 119.4° | 120.0° |
C11 | C12 | C13 | 121.4° | 120.0° |
C11 | C12 | O5 | 120.9° | 120.0° |
C12 | C11 | H4 | 119.7° | 120.1° |
C14 | C13 | C12 | 118.6° | 120.1° |
C14 | C13 | O6 | 125.7° | 120.0° |
C13 | C14 | H6 | 120.0° | 119.9° |
C13 | C12 | O5 | 117.7° | 120.0° |
C12 | C13 | O6 | 115.7° | 119.9° |
C12 | O5 | H5 | 109.5° | 114.0° |
C13 | O6 | C01 | 118.2° | 117.0° |
O6 | C01 | H1 | 109.5° | 109.5° |
O6 | C01 | H2 | 109.4° | 109.5° |
O6 | C01 | H3 | 109.5° | 109.5° |
H1 | C01 | H2 | 109.4° | 109.5° |
H1 | C01 | H3 | 109.5° | 109.5° |
H2 | C01 | H3 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C4 | C3 | C5 | 179.8° | 179.8° |
O2 | C4 | C3 | C2 | 179.8° | 180.0° |
O2 | C4 | C5 | C7 | 0.1° | 0.1° |
O2 | C4 | C5 | C6 | 179.4° | 180.0° |
O2 | C4 | C3 | H10 | 0.2° | 0.1° |
O3 | C7 | C5 | C4 | 4.6° | 0.0° |
O3 | C7 | C5 | C8 | 176.3° | 179.7° |
O3 | C7 | C5 | C6 | 176.1° | 179.9° |
O3 | C7 | C8 | C9 | 177.3° | 179.7° |
O3 | C7 | C8 | H12 | 2.7° | 0.2° |
C4 | C3 | C2 | H10 | 180.0° | 179.9° |
C3 | C4 | C5 | C7 | 179.9° | 180.0° |
C3 | C4 | C5 | C6 | 0.8° | 0.1° |
C4 | C3 | C2 | O1 | 179.9° | 179.9° |
C4 | C3 | C2 | C1 | 0.1° | 0.1° |
C3 | C4 | O2 | H11 | 178.0° | 89.9° |
C5 | C4 | C3 | C2 | 0.4° | 0.1° |
C4 | C5 | C7 | C6 | 179.3° | 179.9° |
C4 | C5 | C7 | C8 | 179.2° | 179.8° |
C4 | C5 | C6 | C1 | 0.8° | 0.1° |
C4 | C5 | C6 | O4 | 178.8° | 180.0° |
C5 | C4 | C3 | H10 | 179.6° | 180.0° |
C5 | C4 | O2 | H11 | 1.8° | 89.9° |
C3 | C2 | O1 | C1 | 179.8° | 180.0° |
C3 | C2 | C1 | C6 | 0.1° | 0.0° |
C3 | C2 | C1 | H8 | 179.9° | 180.0° |
C3 | C2 | O1 | H9 | 180.0° | 89.9° |
C5 | C7 | C8 | C9 | 0.9° | 0.6° |
C7 | C5 | C6 | C1 | 179.9° | 180.0° |
C7 | C5 | C6 | O4 | 0.5° | 0.1° |
C5 | C7 | C8 | H12 | 179.1° | 180.0° |
C8 | C7 | C5 | C6 | 0.1° | 0.4° |
C7 | C8 | C9 | H12 | 180.0° | 179.4° |
C7 | C8 | C9 | O4 | 1.6° | 0.6° |
C7 | C8 | C9 | C10 | 177.7° | 179.7° |
C5 | C6 | C1 | C2 | 0.5° | 0.0° |
C5 | C6 | C1 | O4 | 179.7° | 180.0° |
C5 | C6 | O4 | C9 | 0.2° | 0.0° |
C5 | C6 | C1 | H8 | 179.5° | 180.0° |
O1 | C2 | C1 | C6 | 179.9° | 180.0° |
O1 | C2 | C1 | H8 | 0.1° | 0.1° |
O1 | C2 | C3 | H10 | 0.1° | 0.1° |
C2 | C1 | C6 | H8 | 180.0° | 179.9° |
C2 | C1 | C6 | O4 | 179.2° | 180.0° |
C1 | C2 | O1 | H9 | 0.2° | 90.0° |
C1 | C2 | C3 | H10 | 180.0° | 180.0° |
C8 | C9 | O4 | C6 | 1.2° | 0.3° |
C8 | C9 | O4 | C10 | 179.4° | 179.7° |
C8 | C9 | C10 | C15 | 27.1° | 0.3° |
C8 | C9 | C10 | C11 | 154.5° | 179.4° |
C1 | C6 | O4 | C9 | 179.4° | 180.0° |
C6 | O4 | C9 | C10 | 178.1° | 180.0° |
O4 | C6 | C1 | H8 | 0.9° | 0.1° |
O4 | C9 | C10 | C15 | 152.3° | 180.0° |
O4 | C9 | C10 | C11 | 26.2° | 0.2° |
O4 | C9 | C8 | H12 | 178.4° | 180.0° |
C9 | C10 | C15 | C11 | 178.4° | 179.7° |
C9 | C10 | C15 | C14 | 179.3° | 180.0° |
C9 | C10 | C11 | C12 | 179.4° | 180.0° |
C9 | C10 | C11 | H4 | 0.6° | 0.0° |
C9 | C10 | C15 | H7 | 0.7° | 0.0° |
C10 | C9 | C8 | H12 | 2.3° | 0.3° |
C10 | C15 | C14 | H7 | 180.0° | 180.0° |
C15 | C10 | C11 | C12 | 1.0° | 0.3° |
C10 | C15 | C14 | C13 | 0.7° | 0.0° |
C15 | C10 | C11 | H4 | 179.0° | 179.7° |
C10 | C15 | C14 | H6 | 179.3° | 180.0° |
C11 | C10 | C15 | C14 | 0.8° | 0.3° |
C10 | C11 | C12 | H4 | 180.0° | 180.0° |
C10 | C11 | C12 | C13 | 1.0° | 0.0° |
C10 | C11 | C12 | O5 | 179.5° | 179.9° |
C11 | C10 | C15 | H7 | 179.2° | 179.7° |
C15 | C14 | C13 | H6 | 180.0° | 179.9° |
C15 | C14 | C13 | C12 | 0.6° | 0.3° |
C15 | C14 | C13 | O6 | 179.6° | 180.0° |
C11 | C12 | C13 | C14 | 0.8° | 0.3° |
C11 | C12 | C13 | O5 | 179.6° | 179.9° |
C11 | C12 | C13 | O6 | 179.9° | 180.0° |
C11 | C12 | O5 | H5 | 180.0° | 90.0° |
C14 | C13 | C12 | O6 | 179.1° | 179.7° |
C14 | C13 | C12 | O5 | 179.7° | 179.8° |
C14 | C13 | O6 | C01 | 18.9° | 0.3° |
C13 | C14 | C15 | H7 | 179.3° | 180.0° |
C12 | C13 | O6 | C01 | 162.0° | 180.0° |
C13 | C12 | C11 | H4 | 179.0° | 179.9° |
C13 | C12 | O5 | H5 | 0.4° | 90.1° |
C12 | C13 | C14 | H6 | 179.4° | 179.6° |
O5 | C12 | C13 | O6 | 0.5° | 0.1° |
O5 | C12 | C11 | H4 | 0.5° | 0.0° |
C13 | O6 | C01 | H1 | 180.0° | 180.0° |
C13 | O6 | C01 | H2 | 60.0° | 60.0° |
C13 | O6 | C01 | H3 | 60.0° | 60.0° |
O6 | C13 | C14 | H6 | 0.4° | 0.0° |
O6 | C01 | H1 | H2 | 120.0° | 120.0° |
O6 | C01 | H1 | H3 | 120.0° | 120.0° |
O6 | C01 | H2 | H3 | 120.0° | 120.0° |
H1 | C01 | H2 | H3 | 120.0° | 120.0° |
H6 | C14 | C15 | H7 | 0.7° | 0.1° |