J6E
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C7 | C6 | sing | 1.55Å | 1.46Å | |
C7 | C8 | sing | 1.55Å | 1.50Å | |
C6 | C5 | sing | 1.54Å | 1.50Å | |
C5 | N1 | sing | 1.47Å | 1.46Å | |
C8 | N1 | sing | 1.48Å | 1.44Å | |
N1 | C4 | sing | 1.35Å | 1.35Å | |
C4 | O | doub | 1.22Å | 1.22Å | |
C4 | N | sing | 1.35Å | 1.36Å | |
N | C3 | sing | 1.40Å | 1.41Å | |
C3 | C9 | doub | 1.39Å | 1.39Å | Aromatic |
C3 | C2 | sing | 1.39Å | 1.39Å | Aromatic |
N3 | C15 | sing | 1.34Å | 1.37Å | Aromatic |
N3 | C16 | doub | 1.32Å | 1.33Å | Aromatic |
C9 | C10 | sing | 1.39Å | 1.39Å | Aromatic |
N4 | C16 | sing | 1.34Å | 1.34Å | Aromatic |
N4 | C11 | doub | 1.32Å | 1.32Å | Aromatic |
C15 | C14 | doub | 1.36Å | 1.36Å | Aromatic |
C2 | C1 | doub | 1.38Å | 1.38Å | Aromatic |
C16 | N2 | sing | 1.38Å | 1.39Å | Aromatic |
C10 | C11 | sing | 1.48Å | 1.47Å | |
C10 | C | doub | 1.40Å | 1.38Å | Aromatic |
C11 | C12 | sing | 1.41Å | 1.43Å | Aromatic |
C1 | C | sing | 1.38Å | 1.37Å | Aromatic |
C14 | N2 | sing | 1.37Å | 1.37Å | Aromatic |
C14 | N5 | sing | 1.40Å | 1.39Å | |
C | F | sing | 1.35Å | 1.35Å | |
N2 | C13 | sing | 1.37Å | 1.37Å | Aromatic |
C20 | N5 | sing | 1.47Å | 1.47Å | |
C20 | C19 | sing | 1.53Å | 1.50Å | |
C12 | C13 | doub | 1.35Å | 1.34Å | Aromatic |
N5 | C17 | sing | 1.47Å | 1.47Å | |
C17 | C18 | sing | 1.53Å | 1.50Å | |
C19 | O1 | sing | 1.43Å | 1.43Å | |
O1 | C18 | sing | 1.43Å | 1.42Å | |
C5 | H1 | sing | 1.09Å | 1.10Å | |
C5 | H2 | sing | 1.09Å | 1.10Å | |
C6 | H3 | sing | 1.09Å | 1.10Å | |
C6 | H4 | sing | 1.09Å | 1.10Å | |
C7 | H5 | sing | 1.09Å | 1.10Å | |
C7 | H6 | sing | 1.09Å | 1.10Å | |
C8 | H7 | sing | 1.09Å | 1.10Å | |
C8 | H8 | sing | 1.09Å | 1.10Å | |
C13 | H9 | sing | 1.08Å | 1.08Å | |
C15 | H10 | sing | 1.08Å | 1.08Å | |
C17 | H11 | sing | 1.09Å | 1.10Å | |
C17 | H12 | sing | 1.09Å | 1.10Å | |
C20 | H13 | sing | 1.09Å | 1.10Å | |
C20 | H14 | sing | 1.09Å | 1.10Å | |
N | H15 | sing | 0.97Å | 1.00Å | |
C2 | H16 | sing | 1.08Å | 1.08Å | |
C1 | H17 | sing | 1.08Å | 1.08Å | |
C9 | H18 | sing | 1.08Å | 1.08Å | |
C12 | H19 | sing | 1.08Å | 1.08Å | |
C19 | H20 | sing | 1.09Å | 1.10Å | |
C19 | H21 | sing | 1.09Å | 1.10Å | |
C18 | H22 | sing | 1.09Å | 1.10Å | |
C18 | H23 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C6 | C7 | C8 | 103.5° | 101.5° |
C7 | C6 | C5 | 103.5° | 103.0° |
C7 | C6 | H3 | 111.0° | 110.7° |
C7 | C6 | H4 | 111.0° | 110.9° |
C6 | C7 | H5 | 111.0° | 111.0° |
C6 | C7 | H6 | 110.9° | 111.0° |
C7 | C8 | N1 | 102.8° | 104.8° |
C8 | C7 | H5 | 110.9° | 111.2° |
C8 | C7 | H6 | 110.9° | 110.9° |
C7 | C8 | H7 | 111.1° | 110.4° |
C7 | C8 | H8 | 111.1° | 110.4° |
C6 | C5 | N1 | 103.4° | 107.3° |
C6 | C5 | H1 | 111.0° | 109.9° |
C6 | C5 | H2 | 111.0° | 110.0° |
C5 | C6 | H3 | 110.9° | 110.7° |
C5 | C6 | H4 | 110.9° | 110.7° |
C5 | N1 | C8 | 110.6° | 108.7° |
C5 | N1 | C4 | 119.5° | 125.7° |
N1 | C5 | H1 | 111.0° | 109.8° |
N1 | C5 | H2 | 111.0° | 109.9° |
C8 | N1 | C4 | 130.0° | 125.6° |
N1 | C8 | H7 | 111.1° | 110.6° |
N1 | C8 | H8 | 111.1° | 110.1° |
N1 | C4 | O | 120.5° | 120.0° |
N1 | C4 | N | 115.9° | 120.0° |
O | C4 | N | 123.5° | 120.0° |
C4 | N | C3 | 126.5° | 120.0° |
C4 | N | H15 | 116.8° | 120.0° |
N | C3 | C9 | 122.9° | 120.0° |
N | C3 | C2 | 117.2° | 119.9° |
C3 | N | H15 | 116.8° | 120.1° |
C9 | C3 | C2 | 119.4° | 120.1° |
C3 | C9 | C10 | 120.8° | 119.8° |
C3 | C9 | H18 | 119.6° | 120.1° |
C3 | C2 | C1 | 120.1° | 120.2° |
C3 | C2 | H16 | 119.9° | 119.9° |
C15 | N3 | C16 | 106.2° | 109.3° |
N3 | C15 | C14 | 110.0° | 108.6° |
N3 | C15 | H10 | 125.0° | 125.7° |
N3 | C16 | N4 | 127.7° | 131.8° |
N3 | C16 | N2 | 110.7° | 107.9° |
C9 | C10 | C11 | 119.4° | 120.1° |
C9 | C10 | C | 117.1° | 119.8° |
C10 | C9 | H18 | 119.6° | 120.1° |
C16 | N4 | C11 | 118.4° | 120.8° |
N4 | C16 | N2 | 121.5° | 120.3° |
N4 | C11 | C10 | 115.7° | 119.9° |
N4 | C11 | C12 | 121.1° | 120.3° |
C15 | C14 | N2 | 107.4° | 107.0° |
C15 | C14 | N5 | 131.3° | 126.5° |
C14 | C15 | H10 | 125.0° | 125.7° |
C2 | C1 | C | 119.0° | 120.2° |
C1 | C2 | H16 | 120.0° | 119.9° |
C2 | C1 | H17 | 120.5° | 119.9° |
C16 | N2 | C14 | 105.6° | 107.2° |
C16 | N2 | C13 | 120.3° | 120.2° |
C11 | C10 | C | 123.5° | 120.1° |
C10 | C11 | C12 | 122.2° | 119.9° |
C10 | C | C1 | 122.6° | 119.9° |
C10 | C | F | 119.5° | 120.0° |
C11 | C12 | C13 | 120.1° | 119.3° |
C11 | C12 | H19 | 119.9° | 120.3° |
C1 | C | F | 117.7° | 120.1° |
C | C1 | H17 | 120.5° | 119.9° |
N2 | C14 | N5 | 119.9° | 126.5° |
C14 | N2 | C13 | 134.1° | 132.6° |
C14 | N5 | C20 | 113.6° | 111.0° |
C14 | N5 | C17 | 110.3° | 111.0° |
N2 | C13 | C12 | 118.2° | 119.2° |
N2 | C13 | H9 | 120.9° | 120.4° |
N5 | C20 | C19 | 110.1° | 109.3° |
C20 | N5 | C17 | 113.5° | 110.8° |
N5 | C20 | H13 | 109.3° | 109.6° |
N5 | C20 | H14 | 109.3° | 109.5° |
C20 | C19 | O1 | 112.0° | 109.3° |
C19 | C20 | H13 | 109.3° | 109.5° |
C19 | C20 | H14 | 109.3° | 109.5° |
C20 | C19 | H20 | 108.8° | 109.5° |
C20 | C19 | H21 | 108.8° | 109.5° |
C12 | C13 | H9 | 120.9° | 120.4° |
C13 | C12 | H19 | 119.9° | 120.4° |
N5 | C17 | C18 | 110.7° | 109.3° |
N5 | C17 | H11 | 109.2° | 109.5° |
N5 | C17 | H12 | 109.2° | 109.5° |
C17 | C18 | O1 | 111.2° | 109.3° |
C18 | C17 | H11 | 109.1° | 109.5° |
C18 | C17 | H12 | 109.1° | 109.5° |
C17 | C18 | H22 | 109.0° | 109.5° |
C17 | C18 | H23 | 109.0° | 109.5° |
C19 | O1 | C18 | 110.1° | 113.7° |
O1 | C19 | H20 | 108.9° | 109.5° |
O1 | C19 | H21 | 108.8° | 109.5° |
O1 | C18 | H22 | 109.0° | 109.5° |
O1 | C18 | H23 | 109.0° | 109.5° |
H1 | C5 | H2 | 109.5° | 109.9° |
H3 | C6 | H4 | 109.5° | 110.7° |
H5 | C7 | H6 | 109.5° | 110.9° |
H7 | C8 | H8 | 109.5° | 110.4° |
H11 | C17 | H12 | 109.5° | 109.5° |
H13 | C20 | H14 | 109.4° | 109.5° |
H20 | C19 | H21 | 109.4° | 109.5° |
H22 | C18 | H23 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C6 | C7 | C8 | H5 | 119.1° | 118.1° |
C6 | C7 | C8 | H6 | 119.0° | 117.9° |
C7 | C6 | C5 | H3 | 119.1° | 118.3° |
C7 | C6 | C5 | H4 | 119.1° | 118.5° |
C7 | C6 | C5 | N1 | 29.5° | 22.2° |
C6 | C7 | C8 | N1 | 35.5° | 37.3° |
C7 | C6 | C5 | H1 | 89.6° | 97.2° |
C7 | C6 | C5 | H2 | 148.5° | 141.7° |
C7 | C6 | H3 | H4 | 122.8° | 123.3° |
C6 | C7 | H5 | H6 | 122.7° | 123.9° |
C6 | C7 | C8 | H7 | 83.5° | 81.8° |
C6 | C7 | C8 | H8 | 154.4° | 155.8° |
C8 | C7 | C6 | C5 | 40.4° | 35.7° |
C7 | C8 | N1 | C5 | 17.1° | 24.5° |
C7 | C8 | N1 | H7 | 119.0° | 119.0° |
C7 | C8 | N1 | H8 | 118.9° | 118.7° |
C7 | C8 | N1 | C4 | 164.7° | 155.8° |
C8 | C7 | C6 | H3 | 159.5° | 154.0° |
C8 | C7 | C6 | H4 | 78.6° | 82.8° |
C8 | C7 | H5 | H6 | 122.8° | 124.0° |
C7 | C8 | H7 | H8 | 123.1° | 122.4° |
C6 | C5 | N1 | H1 | 119.0° | 119.5° |
C6 | C5 | N1 | H2 | 119.0° | 119.6° |
C6 | C5 | N1 | C8 | 7.3° | 1.3° |
C6 | C5 | N1 | C4 | 171.2° | 179.0° |
C6 | C5 | H1 | H2 | 122.8° | 121.2° |
C5 | C6 | H3 | H4 | 122.7° | 123.1° |
C5 | C6 | C7 | H5 | 159.4° | 82.6° |
C5 | C6 | C7 | H6 | 78.6° | 153.6° |
C5 | N1 | C8 | C4 | 178.3° | 179.7° |
C5 | N1 | C4 | O | 13.7° | 0.0° |
C5 | N1 | C4 | N | 170.5° | 180.0° |
N1 | C5 | H1 | H2 | 122.8° | 121.0° |
N1 | C5 | C6 | H3 | 148.5° | 140.5° |
N1 | C5 | C6 | H4 | 89.6° | 96.3° |
C5 | N1 | C8 | H7 | 101.9° | 94.5° |
C5 | N1 | C8 | H8 | 136.0° | 143.2° |
C8 | N1 | C4 | O | 168.2° | 179.7° |
C8 | N1 | C4 | N | 7.6° | 0.3° |
C8 | N1 | C5 | H1 | 111.7° | 120.7° |
C8 | N1 | C5 | H2 | 126.3° | 118.3° |
N1 | C8 | C7 | H5 | 154.5° | 80.8° |
N1 | C8 | C7 | H6 | 83.6° | 155.2° |
N1 | C8 | H7 | H8 | 123.0° | 122.1° |
N1 | C4 | O | N | 175.4° | 180.0° |
N1 | C4 | N | C3 | 176.9° | 175.4° |
C4 | N1 | C5 | H1 | 69.8° | 59.5° |
C4 | N1 | C5 | H2 | 52.1° | 61.4° |
C4 | N1 | C8 | H7 | 76.4° | 85.2° |
C4 | N1 | C8 | H8 | 45.7° | 37.1° |
N1 | C4 | N | H15 | 3.1° | 4.6° |
O | C4 | N | C3 | 7.5° | 4.6° |
O | C4 | N | H15 | 172.5° | 175.4° |
C4 | N | C3 | H15 | 180.0° | 180.0° |
C4 | N | C3 | C9 | 11.6° | 35.1° |
C4 | N | C3 | C2 | 160.9° | 144.9° |
N | C3 | C9 | C2 | 172.3° | 180.0° |
N | C3 | C9 | C10 | 162.9° | 180.0° |
N | C3 | C2 | C1 | 171.9° | 179.8° |
N | C3 | C2 | H16 | 8.1° | 0.1° |
N | C3 | C9 | H18 | 17.1° | 0.1° |
C3 | C9 | C10 | H18 | 180.0° | 179.9° |
C9 | C3 | C2 | C1 | 0.8° | 0.2° |
C3 | C9 | C10 | C11 | 170.1° | 180.0° |
C3 | C9 | C10 | C | 12.4° | 0.3° |
C9 | C3 | N | H15 | 168.5° | 144.9° |
C9 | C3 | C2 | H16 | 179.2° | 180.0° |
C2 | C3 | C9 | C10 | 9.3° | 0.1° |
C3 | C2 | C1 | H16 | 180.0° | 179.9° |
C3 | C2 | C1 | C | 4.2° | 0.2° |
C2 | C3 | N | H15 | 19.1° | 35.2° |
C3 | C2 | C1 | H17 | 175.8° | 180.0° |
C2 | C3 | C9 | H18 | 170.7° | 180.0° |
C15 | N3 | C16 | N4 | 175.8° | 180.0° |
N3 | C15 | C14 | H10 | 180.0° | 180.0° |
C15 | N3 | C16 | N2 | 2.0° | 0.0° |
N3 | C15 | C14 | N2 | 2.7° | 0.0° |
N3 | C15 | C14 | N5 | 163.1° | 179.9° |
N3 | C16 | N4 | N2 | 177.6° | 180.0° |
N3 | C16 | N4 | C11 | 178.7° | 180.0° |
C16 | N3 | C15 | C14 | 0.4° | 0.0° |
N3 | C16 | N2 | C14 | 3.6° | 0.0° |
N3 | C16 | N2 | C13 | 176.8° | 180.0° |
C16 | N3 | C15 | H10 | 179.6° | 180.0° |
C9 | C10 | C11 | N4 | 29.0° | 179.8° |
C9 | C10 | C11 | C | 177.4° | 179.7° |
C9 | C10 | C11 | C12 | 162.1° | 0.3° |
C9 | C10 | C | C1 | 7.3° | 0.3° |
C9 | C10 | C | F | 167.0° | 179.7° |
C16 | N4 | C11 | C10 | 170.3° | 179.9° |
C16 | N4 | C11 | C12 | 1.3° | 0.1° |
N4 | C16 | N2 | C14 | 174.3° | 180.0° |
N4 | C16 | N2 | C13 | 5.2° | 0.0° |
C11 | N4 | C16 | N2 | 3.7° | 0.0° |
N4 | C11 | C10 | C12 | 168.9° | 179.9° |
N4 | C11 | C10 | C | 148.4° | 0.1° |
N4 | C11 | C12 | C13 | 5.0° | 0.1° |
N4 | C11 | C12 | H19 | 175.0° | 180.0° |
C15 | C14 | N2 | C16 | 3.7° | 0.0° |
C15 | C14 | N2 | N5 | 167.7° | 180.0° |
C15 | C14 | N2 | C13 | 176.8° | 180.0° |
C15 | C14 | N5 | C20 | 38.6° | 0.1° |
C15 | C14 | N5 | C17 | 90.1° | 123.7° |
C2 | C1 | C | C10 | 0.9° | 0.0° |
C2 | C1 | C | H17 | 180.0° | 179.8° |
C2 | C1 | C | F | 175.2° | 179.9° |
C16 | N2 | C14 | C13 | 179.5° | 180.0° |
C16 | N2 | C14 | N5 | 164.0° | 179.9° |
C16 | N2 | C13 | C12 | 1.4° | 0.0° |
C16 | N2 | C13 | H9 | 178.6° | 180.0° |
C11 | C10 | C | C1 | 175.2° | 179.9° |
C11 | C10 | C | F | 10.5° | 0.0° |
C10 | C11 | C12 | C13 | 173.3° | 180.0° |
C11 | C10 | C9 | H18 | 9.9° | 0.1° |
C10 | C11 | C12 | H19 | 6.7° | 0.1° |
C | C10 | C11 | C12 | 20.5° | 180.0° |
C10 | C | C1 | F | 174.4° | 179.9° |
C10 | C | C1 | H17 | 179.2° | 179.8° |
C | C10 | C9 | H18 | 167.6° | 179.8° |
C11 | C12 | C13 | N2 | 3.4° | 0.1° |
C11 | C12 | C13 | H19 | 180.0° | 180.0° |
C11 | C12 | C13 | H9 | 176.6° | 179.9° |
C | C1 | C2 | H16 | 175.8° | 179.9° |
N2 | C14 | N5 | C20 | 157.1° | 180.0° |
C14 | N2 | C13 | C12 | 178.0° | 180.0° |
N2 | C14 | N5 | C17 | 74.2° | 56.3° |
C14 | N2 | C13 | H9 | 2.0° | 0.0° |
N2 | C14 | C15 | H10 | 177.3° | 180.0° |
N5 | C14 | N2 | C13 | 15.5° | 0.0° |
C14 | N5 | C20 | C17 | 127.1° | 123.9° |
C14 | N5 | C20 | C19 | 176.6° | 177.6° |
C14 | N5 | C17 | C18 | 179.0° | 177.6° |
N5 | C14 | C15 | H10 | 16.9° | 0.1° |
C14 | N5 | C17 | H11 | 58.9° | 62.5° |
C14 | N5 | C17 | H12 | 60.8° | 57.6° |
C14 | N5 | C20 | H13 | 63.3° | 57.6° |
C14 | N5 | C20 | H14 | 56.5° | 62.5° |
F | C | C1 | H17 | 4.8° | 0.3° |
N2 | C13 | C12 | H9 | 180.0° | 180.0° |
N2 | C13 | C12 | H19 | 176.6° | 180.0° |
N5 | C20 | C19 | H13 | 120.1° | 120.0° |
N5 | C20 | C19 | H14 | 120.1° | 119.9° |
C20 | N5 | C17 | C18 | 50.2° | 58.6° |
N5 | C20 | C19 | O1 | 54.3° | 56.8° |
C20 | N5 | C17 | H11 | 70.0° | 61.3° |
C20 | N5 | C17 | H12 | 170.4° | 178.6° |
N5 | C20 | H13 | H14 | 119.7° | 120.1° |
N5 | C20 | C19 | H20 | 66.1° | 63.1° |
N5 | C20 | C19 | H21 | 174.7° | 176.8° |
C19 | C20 | N5 | C17 | 49.5° | 58.6° |
C20 | C19 | O1 | H20 | 120.4° | 119.9° |
C20 | C19 | O1 | H21 | 120.4° | 120.0° |
C20 | C19 | O1 | C18 | 60.5° | 58.7° |
C19 | C20 | H13 | H14 | 119.7° | 120.1° |
C20 | C19 | H20 | H21 | 118.8° | 120.1° |
N5 | C17 | C18 | H11 | 120.2° | 119.9° |
N5 | C17 | C18 | H12 | 120.2° | 120.0° |
N5 | C17 | C18 | O1 | 55.1° | 56.8° |
N5 | C17 | H11 | H12 | 119.5° | 120.1° |
C17 | N5 | C20 | H13 | 169.6° | 178.5° |
C17 | N5 | C20 | H14 | 70.6° | 61.4° |
N5 | C17 | C18 | H22 | 175.4° | 176.7° |
N5 | C17 | C18 | H23 | 65.1° | 63.1° |
C17 | C18 | O1 | C19 | 60.4° | 58.7° |
C17 | C18 | O1 | H22 | 120.2° | 120.0° |
C17 | C18 | O1 | H23 | 120.3° | 120.0° |
C18 | C17 | H11 | H12 | 119.4° | 120.1° |
C17 | C18 | H22 | H23 | 119.2° | 120.2° |
O1 | C19 | C20 | H13 | 174.4° | 176.8° |
O1 | C19 | C20 | H14 | 65.8° | 63.1° |
O1 | C19 | H20 | H21 | 118.8° | 120.1° |
C19 | O1 | C18 | H22 | 179.3° | 178.6° |
C19 | O1 | C18 | H23 | 59.9° | 61.3° |
O1 | C18 | C17 | H11 | 65.0° | 63.1° |
O1 | C18 | C17 | H12 | 175.3° | 176.8° |
C18 | O1 | C19 | H20 | 59.9° | 61.3° |
C18 | O1 | C19 | H21 | 179.1° | 178.6° |
O1 | C18 | H22 | H23 | 119.2° | 120.1° |
H1 | C5 | C6 | H3 | 29.5° | 21.1° |
H1 | C5 | C6 | H4 | 151.4° | 144.3° |
H2 | C5 | C6 | H3 | 92.5° | 100.0° |
H2 | C5 | C6 | H4 | 29.4° | 23.1° |
H3 | C6 | C7 | H5 | 81.5° | 35.8° |
H3 | C6 | C7 | H6 | 40.4° | 88.1° |
H4 | C6 | C7 | H5 | 40.4° | 159.0° |
H4 | C6 | C7 | H6 | 162.3° | 35.1° |
H5 | C7 | C8 | H7 | 35.6° | 160.1° |
H5 | C7 | C8 | H8 | 86.6° | 37.7° |
H6 | C7 | C8 | H7 | 157.5° | 36.1° |
H6 | C7 | C8 | H8 | 35.4° | 86.2° |
H9 | C13 | C12 | H19 | 3.4° | 0.0° |
H11 | C17 | C18 | H22 | 55.2° | 56.9° |
H11 | C17 | C18 | H23 | 174.7° | 177.0° |
H12 | C17 | C18 | H22 | 64.4° | 63.2° |
H12 | C17 | C18 | H23 | 55.0° | 56.9° |
H13 | C20 | C19 | H20 | 54.0° | 56.9° |
H13 | C20 | C19 | H21 | 65.2° | 63.2° |
H14 | C20 | C19 | H20 | 173.8° | 177.0° |
H14 | C20 | C19 | H21 | 54.6° | 56.9° |
H16 | C2 | C1 | H17 | 4.2° | 0.2° |