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J5G

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OC1doub1.21Å1.23Å
CC1sing1.51Å1.48Å
C1Nsing1.35Å1.35Å
NC2sing1.40Å1.36Å
N1C2doub1.31Å1.31ÅAromatic
N1O1sing1.21Å1.41ÅAromatic
C2C3sing1.42Å1.41ÅAromatic
O1C4sing1.34Å1.35ÅAromatic
C3C4doub1.35Å1.34ÅAromatic
C4C5sing1.51Å1.48Å
C5H1sing1.09Å1.10Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
CH4sing1.09Å1.10Å
CH5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
NH7sing0.97Å1.00Å
C3H8sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OC1C122.6°120.0°
OC1N122.4°120.0°
CC1N114.5°120.0°
C1CH4109.5°109.4°
C1CH5109.4°109.5°
C1CH6109.4°109.5°
C1NC2128.5°120.0°
C1NH7115.7°120.0°
NC2N1118.6°126.9°
NC2C3129.2°126.9°
C2NH7115.7°119.9°
C2N1O1104.7°111.5°
N1C2C3112.2°106.2°
N1O1C4108.6°111.8°
C2C3C4104.7°103.9°
C2C3H8127.6°128.1°
O1C4C3109.8°106.6°
O1C4C5115.8°126.7°
C3C4C5134.3°126.7°
C4C3H8127.7°128.0°
C4C5H1109.5°109.5°
C4C5H2109.5°109.5°
C4C5H3109.5°109.5°
H1C5H2109.5°109.4°
H1C5H3109.5°109.5°
H2C5H3109.4°109.4°
H4CH5109.5°109.5°
H4CH6109.5°109.5°
H5CH6109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OC1CN172.4°180.0°
OC1NC24.7°0.0°
OC1CH40.0°0.0°
OC1CH5120.0°120.0°
OC1CH6120.0°120.0°
OC1NH7175.2°179.9°
CC1NC2177.2°180.0°
C1CH4H5120.0°120.0°
C1CH4H6120.0°120.0°
C1CH5H6120.0°120.0°
CC1NH72.8°0.1°
C1NC2H7180.0°179.9°
C1NC2N14.0°180.0°
C1NC2C3173.2°0.0°
NC1CH4172.4°180.0°
NC1CH552.4°60.0°
NC1CH667.6°60.0°
NC2N1C3177.6°180.0°
NC2N1O1175.3°180.0°
NC2C3C4174.1°179.8°
NC2C3H85.9°0.1°
C2N1O1C40.6°0.2°
N1C2C3C43.2°0.2°
N1C2NH7176.0°0.1°
N1C2C3H8176.7°180.0°
O1N1C2C32.3°0.0°
N1O1C4C31.5°0.3°
N1O1C4C5175.5°180.0°
C2C3C4O12.7°0.3°
C2C3C4H8180.0°179.7°
C2C3C4C5173.5°180.0°
C3C2NH76.8°179.9°
O1C4C3C5176.2°179.6°
O1C4C5H10.0°0.1°
O1C4C5H2120.0°120.1°
O1C4C5H3120.0°119.9°
O1C4C3H8177.2°179.9°
C3C4C5H1176.0°179.7°
C3C4C5H263.9°60.4°
C3C4C5H356.0°59.6°
C4C5H1H2120.0°120.0°
C4C5H1H3120.0°120.1°
C4C5H2H3120.0°120.0°
C5C4C3H86.5°0.3°
H1C5H2H3120.0°119.9°
H4CH5H6120.0°120.0°

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PDB entries from 2024-08-07

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