J4J
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O30 | N28 | doub | 1.22Å | 1.22Å | |
O19 | C18 | doub | 1.21Å | 1.23Å | |
S21 | C22 | sing | 1.76Å | 1.71Å | |
S21 | C20 | sing | 1.81Å | 1.77Å | |
N28 | C27 | sing | 1.48Å | 1.41Å | |
N28 | O29 | sing | 1.22Å | 1.40Å | |
C18 | C20 | sing | 1.51Å | 1.52Å | |
C18 | N17 | sing | 1.35Å | 1.34Å | |
C22 | C27 | doub | 1.39Å | 1.40Å | Aromatic |
C22 | C23 | sing | 1.39Å | 1.39Å | Aromatic |
C27 | C26 | sing | 1.38Å | 1.39Å | Aromatic |
N16 | N17 | sing | 1.37Å | 1.32Å | |
C23 | C24 | doub | 1.38Å | 1.39Å | Aromatic |
C26 | C25 | doub | 1.38Å | 1.38Å | Aromatic |
C24 | C25 | sing | 1.38Å | 1.37Å | Aromatic |
C26 | H1 | sing | 1.08Å | 1.08Å | |
C25 | H2 | sing | 1.08Å | 1.08Å | |
C24 | H3 | sing | 1.08Å | 1.08Å | |
C23 | H4 | sing | 1.08Å | 1.08Å | |
C20 | H5 | sing | 1.09Å | 1.10Å | |
C20 | H6 | sing | 1.09Å | 1.10Å | |
N17 | H7 | sing | 0.97Å | 1.00Å | |
N16 | H8 | sing | 1.01Å | 1.00Å | |
N16 | H9 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O30 | N28 | C27 | 119.2° | 120.0° |
O30 | N28 | O29 | 119.4° | 120.0° |
O19 | C18 | C20 | 121.0° | 120.0° |
O19 | C18 | N17 | 121.8° | 120.0° |
C22 | S21 | C20 | 111.7° | 103.0° |
S21 | C22 | C27 | 125.4° | 120.1° |
S21 | C22 | C23 | 116.2° | 120.1° |
S21 | C20 | C18 | 111.7° | 109.5° |
S21 | C20 | H5 | 108.9° | 109.5° |
S21 | C20 | H6 | 108.9° | 109.5° |
C27 | N28 | O29 | 121.3° | 120.0° |
N28 | C27 | C22 | 126.3° | 120.0° |
N28 | C27 | C26 | 115.3° | 120.0° |
C20 | C18 | N17 | 117.2° | 120.0° |
C18 | C20 | H5 | 108.9° | 109.5° |
C18 | C20 | H6 | 108.9° | 109.5° |
C18 | N17 | N16 | 119.2° | 120.0° |
C18 | N17 | H7 | 120.4° | 120.0° |
C27 | C22 | C23 | 118.4° | 119.8° |
C22 | C27 | C26 | 118.5° | 119.9° |
C22 | C23 | C24 | 122.6° | 119.9° |
C22 | C23 | H4 | 118.7° | 120.0° |
C27 | C26 | C25 | 121.9° | 120.1° |
C27 | C26 | H1 | 119.0° | 119.9° |
N16 | N17 | H7 | 120.4° | 119.9° |
N17 | N16 | H8 | 109.5° | 111.0° |
N17 | N16 | H9 | 109.5° | 111.0° |
C23 | C24 | C25 | 118.2° | 120.1° |
C23 | C24 | H3 | 120.9° | 119.9° |
C24 | C23 | H4 | 118.7° | 120.1° |
C26 | C25 | C24 | 120.4° | 120.2° |
C25 | C26 | H1 | 119.1° | 120.0° |
C26 | C25 | H2 | 119.8° | 119.9° |
C24 | C25 | H2 | 119.8° | 119.9° |
C25 | C24 | H3 | 120.9° | 120.0° |
H5 | C20 | H6 | 109.5° | 109.4° |
H8 | N16 | H9 | 109.4° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O30 | N28 | C27 | O29 | 177.1° | 179.7° |
O30 | N28 | C27 | C22 | 86.4° | 179.7° |
O30 | N28 | C27 | C26 | 92.8° | 0.0° |
O19 | C18 | C20 | S21 | 2.6° | 0.0° |
O19 | C18 | C20 | N17 | 179.7° | 180.0° |
O19 | C18 | N17 | N16 | 0.7° | 0.0° |
O19 | C18 | C20 | H5 | 122.9° | 120.0° |
O19 | C18 | C20 | H6 | 117.7° | 120.0° |
O19 | C18 | N17 | H7 | 179.3° | 180.0° |
S21 | C22 | C27 | N28 | 1.0° | 0.1° |
C22 | S21 | C20 | C18 | 168.4° | 180.0° |
S21 | C22 | C27 | C23 | 180.0° | 179.7° |
S21 | C22 | C27 | C26 | 179.9° | 179.8° |
S21 | C22 | C23 | C24 | 180.0° | 179.8° |
S21 | C22 | C23 | H4 | 0.0° | 0.0° |
C22 | S21 | C20 | H5 | 48.0° | 60.0° |
C22 | S21 | C20 | H6 | 71.3° | 59.9° |
S21 | C20 | C18 | H5 | 120.3° | 120.0° |
S21 | C20 | C18 | H6 | 120.3° | 120.0° |
S21 | C20 | C18 | N17 | 177.1° | 180.0° |
C20 | S21 | C22 | C27 | 136.7° | 180.0° |
C20 | S21 | C22 | C23 | 43.3° | 0.3° |
S21 | C20 | H5 | H6 | 119.0° | 119.9° |
N28 | C27 | C22 | C26 | 179.1° | 179.7° |
N28 | C27 | C22 | C23 | 179.0° | 179.8° |
N28 | C27 | C26 | C25 | 179.9° | 179.9° |
N28 | C27 | C26 | H1 | 0.0° | 0.1° |
O29 | N28 | C27 | C22 | 96.5° | 0.6° |
O29 | N28 | C27 | C26 | 84.4° | 179.7° |
C20 | C18 | N17 | N16 | 179.6° | 180.0° |
C18 | C20 | H5 | H6 | 119.0° | 120.0° |
C20 | C18 | N17 | H7 | 0.4° | 0.0° |
C18 | N17 | N16 | H7 | 180.0° | 180.0° |
N17 | C18 | C20 | H5 | 56.8° | 60.0° |
N17 | C18 | C20 | H6 | 62.5° | 60.0° |
C18 | N17 | N16 | H8 | 180.0° | 56.0° |
C18 | N17 | N16 | H9 | 60.0° | 180.0° |
C27 | C22 | C23 | C24 | 0.0° | 0.5° |
C22 | C27 | C26 | C25 | 0.7° | 0.2° |
C22 | C27 | C26 | H1 | 179.3° | 179.7° |
C27 | C22 | C23 | H4 | 180.0° | 179.7° |
C23 | C22 | C27 | C26 | 0.1° | 0.5° |
C22 | C23 | C24 | H4 | 180.0° | 179.8° |
C22 | C23 | C24 | C25 | 0.9° | 0.2° |
C22 | C23 | C24 | H3 | 179.1° | 179.7° |
C27 | C26 | C25 | H1 | 180.0° | 180.0° |
C27 | C26 | C25 | C24 | 1.7° | 0.0° |
C27 | C26 | C25 | H2 | 178.4° | 180.0° |
N17 | N16 | H8 | H9 | 120.0° | 123.9° |
C23 | C24 | C25 | C26 | 1.7° | 0.0° |
C23 | C24 | C25 | H3 | 180.0° | 180.0° |
C23 | C24 | C25 | H2 | 178.3° | 180.0° |
C26 | C25 | C24 | H2 | 180.0° | 179.9° |
C26 | C25 | C24 | H3 | 178.3° | 180.0° |
C24 | C25 | C26 | H1 | 178.3° | 180.0° |
C25 | C24 | C23 | H4 | 179.1° | 180.0° |
H1 | C26 | C25 | H2 | 1.6° | 0.1° |
H2 | C25 | C24 | H3 | 1.7° | 0.1° |
H3 | C24 | C23 | H4 | 0.9° | 0.1° |
H7 | N17 | N16 | H8 | 0.0° | 123.9° |
H7 | N17 | N16 | H9 | 120.0° | 0.0° |