Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

J3J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C3sing1.43Å1.44Å
O1C1sing1.43Å1.44Å
C3C2sing1.53Å1.54Å
O3C2sing1.45Å1.45Å
O3C4sing1.34Å1.47Å
C2C1sing1.53Å1.53Å
C6C7sing1.53Å1.52Å
C6C5sing1.53Å1.53Å
C4C5sing1.51Å1.52Å
C4O4doub1.21Å1.22Å
O1H1sing0.97Å0.95Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
O2H7sing0.97Å0.95Å
C5H8sing1.09Å1.10Å
C5H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
C7H12sing1.09Å1.10Å
C7H13sing1.09Å1.10Å
C7H14sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C3C2112.0°109.5°
O2C3H5108.8°109.5°
O2C3H6108.9°109.5°
C3O2H7109.5°114.0°
O1C1C2112.8°109.5°
C1O1H1109.5°114.0°
O1C1H2108.6°109.4°
O1C1H3108.6°109.5°
C3C2O3112.5°109.5°
C3C2C1108.9°109.5°
C3C2H4107.8°109.5°
C2C3H5108.9°109.5°
C2C3H6108.8°109.5°
C2O3C4116.1°117.0°
O3C2C1110.6°109.5°
O3C2H4109.0°109.5°
O3C4C5121.4°120.0°
O3C4O4119.0°120.0°
C2C1H2108.6°109.5°
C2C1H3108.6°109.5°
C1C2H4107.9°109.5°
C7C6C5112.4°109.5°
C7C6H10108.7°109.4°
C7C6H11108.8°109.5°
C6C7H12109.5°109.5°
C6C7H13109.5°109.5°
C6C7H14109.4°109.5°
C6C5C4111.4°109.5°
C6C5H8109.0°109.4°
C6C5H9109.0°109.5°
C5C6H10108.8°109.5°
C5C6H11108.7°109.5°
C5C4O4119.6°120.0°
C4C5H8109.0°109.5°
C4C5H9109.0°109.5°
H2C1H3109.5°109.4°
H5C3H6109.4°109.5°
H8C5H9109.5°109.5°
H10C6H11109.5°109.5°
H12C7H13109.5°109.4°
H12C7H14109.5°109.4°
H13C7H14109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C3C2H5120.4°120.0°
O2C3C2H6120.4°120.0°
O2C3C2O348.2°65.0°
O2C3C2C1171.1°55.0°
O2C3C2H472.1°175.0°
O2C3H5H6118.9°120.0°
O1C1C2C351.5°55.0°
O1C1C2O372.5°65.0°
O1C1C2H2120.5°120.0°
O1C1C2H3120.5°120.0°
O1C1H2H3118.5°120.0°
O1C1C2H4168.3°175.0°
C3C2O3C1122.0°120.0°
C3C2O3H4119.6°120.0°
C3C2O3C4130.6°90.0°
C3C2C1H4116.8°120.0°
C3C2C1H2172.0°175.0°
C3C2C1H369.0°65.0°
C2C3H5H6118.8°120.0°
C2C3O2H7180.0°180.0°
O3C2C1H4119.1°120.0°
C2O3C4C574.9°180.0°
C2O3C4O4105.0°0.0°
O3C2C1H247.9°55.0°
O3C2C1H3167.0°175.0°
O3C2C3H572.2°55.0°
O3C2C3H6168.6°175.0°
C4O3C2C1107.4°150.0°
O3C4C5C6114.2°180.0°
O3C4C5O4179.9°180.0°
C4O3C2H411.1°30.0°
O3C4C5H86.1°60.0°
O3C4C5H9125.6°60.0°
C2C1O1H1180.0°180.0°
C2C1H2H3118.5°120.0°
C1C2C3H550.7°175.0°
C1C2C3H668.5°65.0°
C7C6C5H10120.4°119.9°
C7C6C5H11120.4°120.0°
C7C6C5C4175.3°180.0°
C7C6C5H855.0°60.0°
C7C6C5H964.4°59.9°
C7C6H10H11118.7°120.0°
C6C7H12H13120.0°120.0°
C6C7H12H14120.0°120.0°
C6C7H13H14120.0°120.1°
C6C5C4H8120.3°119.9°
C6C5C4H9120.3°120.0°
C6C5C4O466.0°0.1°
C6C5H8H9119.1°120.0°
C5C6H10H11118.7°120.1°
C5C6C7H12180.0°60.0°
C5C6C7H1360.0°59.9°
C5C6C7H1460.0°180.0°
C4C5H8H9119.1°120.1°
C4C5C6H1064.3°60.1°
C4C5C6H1154.9°60.0°
O4C4C5H8173.7°120.0°
O4C4C5H954.3°120.0°
H1O1C1H259.5°60.0°
H1O1C1H359.5°60.0°
H2C1C2H471.2°65.0°
H3C1C2H447.8°55.0°
H4C2C3H5167.5°65.0°
H4C2C3H648.3°55.0°
H5C3O2H759.6°60.0°
H6C3O2H759.6°60.0°
H8C5C6H10175.5°180.0°
H8C5C6H1165.4°60.0°
H9C5C6H1056.0°60.0°
H9C5C6H11175.1°180.0°
H10C6C7H1259.6°180.0°
H10C6C7H1360.5°60.0°
H10C6C7H14179.6°60.0°
H11C6C7H1259.6°60.0°
H11C6C7H13179.6°180.0°
H11C6C7H1460.4°59.9°
H12C7H13H14120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon