Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

IYU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C4sing1.43Å1.42Å
O2C5sing1.43Å1.42Å
C4C3sing1.53Å1.50Å
O1C3sing1.43Å1.42Å
O1C2sing1.43Å1.42Å
C5C6sing1.53Å1.51Å
C1C2sing1.53Å1.50Å
C1Nsing1.46Å1.46Å
NCsing1.35Å1.33Å
C6C7sing1.53Å1.52Å
C9Ssing1.81Å1.75Å
C8C7sing1.53Å1.52Å
C8N1sing1.46Å1.47Å
C11C12doub1.38Å1.38ÅAromatic
C11C10sing1.40Å1.39ÅAromatic
O4Sdoub1.42Å1.43Å
C12C13sing1.39Å1.39ÅAromatic
CC10sing1.48Å1.49Å
COdoub1.22Å1.23Å
C10C33doub1.39Å1.39ÅAromatic
SN1sing1.66Å1.62Å
SO3doub1.42Å1.43Å
O6C14doub1.22Å1.25Å
C13C14sing1.48Å1.51Å
C13C15doub1.41Å1.41ÅAromatic
C14O5sing1.35Å1.26Å
C33C15sing1.39Å1.39ÅAromatic
C31N3sing1.46Å1.45Å
C26C27doub1.36Å1.38ÅAromatic
C26C25sing1.40Å1.39ÅAromatic
C27C30sing1.40Å1.40ÅAromatic
C15C16sing1.47Å1.49Å
C25C16sing1.47Å1.47Å
C25C28doub1.41Å1.39ÅAromatic
C30N3sing1.39Å1.36Å
C30C29doub1.39Å1.40ÅAromatic
N3C32sing1.47Å1.45Å
C16C17doub1.41Å1.39Å
C28C29sing1.39Å1.38ÅAromatic
C28O7sing1.35Å1.38Å
C17C18sing1.41Å1.39Å
C17C24sing1.46Å1.40Å
C18C19doub1.35Å1.38Å
O7C24sing1.35Å1.38Å
C24C23doub1.36Å1.38Å
C19C20sing1.46Å1.40Å
C23C20sing1.41Å1.40Å
C20N2doub1.33Å1.37Å
N2C21sing1.47Å1.45Å
N2C22sing1.46Å1.45Å
N1H1sing0.97Å1.00Å
C7H2sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C9H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C1H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
O5H11sing0.97Å0.95Å
C5H12sing1.09Å1.10Å
C5H13sing1.09Å1.10Å
C6H14sing1.09Å1.10Å
C6H15sing1.09Å1.10Å
C4H16sing1.09Å1.10Å
C4H17sing1.09Å1.10Å
C3H18sing1.09Å1.10Å
C3H19sing1.09Å1.10Å
C2H20sing1.09Å1.10Å
C2H21sing1.09Å1.10Å
NH22sing0.97Å1.00Å
C11H23sing1.08Å1.08Å
C12H24sing1.08Å1.08Å
C18H25sing1.08Å1.08Å
C19H26sing1.08Å1.08Å
C21H27sing1.09Å1.10Å
C21H28sing1.09Å1.10Å
C21H29sing1.09Å1.10Å
C22H30sing1.09Å1.10Å
C22H31sing1.09Å1.10Å
C22H32sing1.09Å1.10Å
C23H33sing1.08Å1.08Å
C26H34sing1.08Å1.08Å
C27H35sing1.08Å1.08Å
C29H36sing1.08Å1.08Å
C31H37sing1.09Å1.10Å
C31H38sing1.09Å1.10Å
C31H39sing1.09Å1.10Å
C32H40sing1.09Å1.10Å
C32H41sing1.09Å1.10Å
C32H42sing1.09Å1.10Å
C33H43sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4O2C5114.0°114.0°
O2C4C3111.1°109.4°
O2C4H16109.1°109.5°
O2C4H17109.1°109.5°
O2C5C6109.6°109.5°
O2C5H12109.5°109.5°
O2C5H13109.4°109.4°
C4C3O1109.9°109.5°
C3C4H16109.1°109.4°
C3C4H17109.1°109.5°
C4C3H18109.4°109.5°
C4C3H19109.4°109.4°
C3O1C2113.6°114.0°
O1C3H18109.3°109.5°
O1C3H19109.3°109.5°
O1C2C1109.5°109.5°
O1C2H20109.4°109.5°
O1C2H21109.4°109.4°
C5C6C7113.3°109.5°
C6C5H12109.4°109.5°
C6C5H13109.5°109.5°
C5C6H14108.5°109.4°
C5C6H15108.5°109.5°
C2C1N112.1°109.5°
C2C1H9108.8°109.4°
C2C1H10108.8°109.4°
C1C2H20109.5°109.5°
C1C2H21109.5°109.5°
C1NC122.4°120.0°
NC1H9108.8°109.5°
NC1H10108.8°109.5°
C1NH22118.8°120.0°
NCC10116.9°120.0°
NCO122.5°120.0°
CNH22118.8°120.0°
C6C7C8113.5°109.5°
C6C7H2108.5°109.5°
C6C7H3108.4°109.5°
C7C6H14108.5°109.4°
C7C6H15108.5°109.5°
C9SO4108.1°110.5°
C9SN1107.5°104.5°
C9SO3108.2°110.6°
SC9H6109.5°109.5°
SC9H7109.5°109.5°
SC9H8109.4°109.5°
C7C8N1111.0°109.5°
C8C7H2108.4°109.4°
C8C7H3108.4°109.5°
C7C8H4109.1°109.4°
C7C8H5109.1°109.5°
C8N1S120.0°120.0°
C8N1H1106.8°120.0°
N1C8H4109.1°109.5°
N1C8H5109.1°109.4°
C12C11C10120.5°120.3°
C11C12C13120.7°120.2°
C12C11H23119.7°119.8°
C11C12H24119.6°119.9°
C11C10C123.2°120.0°
C11C10C33119.2°120.1°
C10C11H23119.7°119.9°
O4SN1106.9°104.3°
O4SO3118.7°121.1°
C12C13C14116.9°120.0°
C12C13C15119.2°119.9°
C13C12H24119.6°119.9°
C10CO120.7°120.0°
CC10C33117.5°119.9°
C10C33C15121.1°119.8°
C10C33H43119.4°120.0°
N1SO3107.0°104.3°
SN1H1106.8°120.0°
O6C14C13118.2°120.0°
O6C14O5124.0°120.0°
C14C13C15123.9°120.1°
C13C14O5117.8°120.0°
C13C15C33119.2°119.7°
C13C15C16123.2°120.2°
C14O5H11109.5°117.0°
C33C15C16117.5°120.1°
C15C33H43119.5°120.1°
C31N3C30120.5°120.0°
C31N3C32116.3°119.9°
N3C31H37109.5°109.5°
N3C31H38109.5°109.4°
N3C31H39109.5°109.5°
C27C26C25121.0°119.9°
C26C27C30120.9°120.3°
C27C26H34119.5°120.0°
C26C27H35119.5°119.9°
C26C25C16124.4°120.3°
C26C25C28117.7°120.2°
C25C26H34119.5°120.1°
C27C30N3121.0°119.8°
C27C30C29118.2°120.5°
C30C27H35119.5°119.8°
C15C16C25118.6°121.1°
C15C16C17121.9°121.2°
C16C25C28117.9°119.5°
C25C16C17119.3°117.7°
C25C28C29121.8°119.2°
C25C28O7122.1°121.0°
N3C30C29120.8°119.8°
C30N3C32120.3°120.0°
C30C29C28120.3°120.0°
C30C29H36119.8°119.9°
N3C32H40109.5°109.5°
N3C32H41109.5°109.5°
N3C32H42109.5°109.4°
C16C17C18122.8°120.6°
C16C17C24119.4°119.0°
C29C28O7116.1°119.8°
C28C29H36119.8°120.1°
C28O7C24119.1°122.3°
C18C17C24117.7°120.4°
C17C18C19121.3°119.9°
C17C18H25119.3°120.0°
C17C24O7122.2°120.4°
C17C24C23121.5°119.5°
C18C19C20120.7°120.0°
C19C18H25119.3°120.1°
C18C19H26119.6°120.0°
O7C24C23116.4°120.1°
C24C23C20120.6°120.0°
C24C23H33119.7°120.0°
C19C20C23118.2°120.2°
C19C20N2121.0°119.9°
C20C19H26119.7°120.0°
C23C20N2120.8°119.8°
C20C23H33119.7°120.0°
C20N2C21120.4°119.9°
C20N2C22120.2°120.0°
C21N2C22114.5°120.0°
N2C21H27109.5°109.4°
N2C21H28109.5°109.5°
N2C21H29109.5°109.5°
N2C22H30109.5°109.5°
N2C22H31109.4°109.5°
N2C22H32109.4°109.4°
H2C7H3109.5°109.5°
H4C8H5109.5°109.5°
H6C9H7109.5°109.5°
H6C9H8109.5°109.5°
H7C9H8109.5°109.4°
H9C1H10109.5°109.4°
H12C5H13109.4°109.4°
H14C6H15109.5°109.5°
H16C4H17109.5°109.5°
H18C3H19109.5°109.5°
H20C2H21109.5°109.5°
H27C21H28109.4°109.5°
H27C21H29109.5°109.5°
H28C21H29109.5°109.5°
H30C22H31109.5°109.5°
H30C22H32109.5°109.4°
H31C22H32109.5°109.5°
H37C31H38109.4°109.4°
H37C31H39109.4°109.5°
H38C31H39109.5°109.4°
H40C32H41109.4°109.5°
H40C32H42109.4°109.5°
H41C32H42109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C4C3H16120.2°119.9°
O2C4C3H17120.2°120.0°
O2C4C3O1166.3°65.0°
C4O2C5C6115.3°180.0°
C4O2C5H12124.7°59.9°
C4O2C5H134.8°60.0°
O2C4H16H17119.3°120.0°
O2C4C3H1873.7°55.0°
O2C4C3H1946.2°175.0°
C5O2C4C339.8°180.0°
O2C5C6H12120.1°120.1°
O2C5C6H13120.0°120.0°
O2C5C6C7171.4°180.0°
O2C5H12H13119.9°120.0°
O2C5C6H1468.0°60.0°
O2C5C6H1550.8°60.0°
C5O2C4H16160.0°60.1°
C5O2C4H1780.5°60.0°
C4C3O1H18120.1°120.1°
C4C3O1H19120.1°120.0°
C4C3O1C2124.4°180.0°
C3C4H16H17119.3°120.0°
C4C3H18H19119.8°120.0°
C3O1C2C1107.1°180.0°
O1C3C4H1646.1°175.0°
O1C3C4H1773.5°55.0°
O1C3H18H19119.8°120.0°
C3O1C2H20132.9°60.0°
C3O1C2H2112.9°60.0°
O1C2C1H20120.0°120.0°
O1C2C1H21120.0°119.9°
O1C2C1N138.5°65.0°
O1C2C1H9101.1°174.9°
O1C2C1H1018.1°55.0°
C2O1C3H184.3°60.0°
C2O1C3H19115.5°60.0°
O1C2H20H21120.0°120.0°
C5C6C7H14120.6°120.0°
C5C6C7H15120.6°120.0°
C5C6C7C867.4°180.0°
C5C6C7H253.2°60.0°
C5C6C7H3172.0°60.0°
C6C5H12H13119.9°120.0°
C5C6H14H15118.2°120.0°
C2C1NH9120.4°120.0°
C2C1NH10120.4°120.0°
C2C1NC61.6°180.0°
C2C1H9H10118.8°119.9°
C1C2H20H21120.0°120.0°
C2C1NH22118.4°0.0°
C1NCH22180.0°180.0°
C1NCC10172.8°180.0°
C1NCO6.0°0.0°
NC1H9H10118.8°120.0°
NC1C2H2018.5°55.0°
NC1C2H21101.5°175.1°
NCC10C1122.5°0.3°
NCC10O178.9°180.0°
NCC10C33157.3°180.0°
CNC1H958.8°60.0°
CNC1H10178.0°60.0°
C6C7C8H2120.6°120.0°
C6C7C8H3120.6°120.0°
C6C7C8N1179.5°180.0°
C6C7H2H3118.2°120.0°
C6C7C8H460.2°60.0°
C6C7C8H559.3°60.0°
C7C6C5H1251.4°60.0°
C7C6C5H1368.6°60.0°
C7C6H14H15118.3°120.0°
C9SN1C869.8°64.7°
C9SO4N1115.5°111.7°
C9SO4O3123.6°131.5°
C9SN1O3116.0°116.1°
C9SN1H1168.7°115.0°
SC9H6H7120.0°120.0°
SC9H6H8120.0°120.1°
SC9H7H8120.0°120.0°
C7C8N1H4120.2°120.0°
C7C8N1H5120.2°120.0°
C7C8N1S142.8°165.3°
C7C8N1H121.4°15.0°
C8C7H2H3118.1°120.0°
C7C8H4H5119.3°120.0°
C8C7C6H14172.0°60.0°
C8C7C6H1553.2°60.0°
C8N1SO446.0°179.3°
C8N1SH1121.5°179.7°
C8N1SO3174.2°51.4°
N1C8C7H258.9°60.0°
N1C8C7H359.9°60.0°
N1C8H4H5119.3°120.0°
C12C11C10H23180.0°180.0°
C11C12C13H24180.0°179.9°
C12C11C10C179.3°179.9°
C12C11C10C330.5°0.2°
C11C12C13C14179.1°180.0°
C11C12C13C151.0°0.1°
C10C11C12C130.2°0.1°
C11C10CC33179.8°179.7°
C11C10CO158.6°179.7°
C11C10C33C150.2°0.5°
C10C11C12H24179.8°180.0°
C11C10C33H43179.8°179.8°
O4SN1O3128.2°127.9°
O4SN1H175.5°1.0°
O4SC9H6180.0°68.4°
O4SC9H760.0°171.6°
O4SC9H860.0°51.7°
C12C13C14O64.9°180.0°
C12C13C14C15178.0°179.9°
C12C13C14O5171.3°0.0°
C12C13C15C331.3°0.2°
C12C13C15C16175.8°180.0°
C13C12C11H23179.8°180.0°
CC10C33C15179.6°179.8°
C10CNH227.2°0.0°
CC10C11H230.7°0.0°
CC10C33H430.4°0.0°
OCC10C3321.6°0.0°
OCNH22173.9°180.0°
C10C33C15C130.7°0.5°
C10C33C15H43180.0°179.7°
C10C33C15C16176.6°179.7°
C33C10C11H23179.5°179.7°
SN1C8H496.9°74.7°
SN1C8H522.6°45.3°
N1SC9H665.0°180.0°
N1SC9H755.0°60.0°
N1SC9H8175.0°59.9°
O3SN1H152.7°128.9°
O3SC9H650.2°68.4°
O3SC9H7170.2°51.6°
O3SC9H869.8°171.6°
O6C14C13O5176.3°180.0°
O6C14C13C15173.1°0.0°
O6C14O5H110.0°0.0°
C14C13C15C33179.2°179.7°
C14C13C15C162.2°0.1°
C13C14O5H11176.0°180.0°
C14C13C12H240.8°0.0°
C15C13C14O510.7°180.0°
C13C15C33C16177.2°179.8°
C13C15C16C25112.9°74.8°
C13C15C16C1772.0°105.0°
C15C13C12H24178.9°180.0°
C13C15C33H43179.3°179.8°
C33C15C16C2570.0°105.1°
C33C15C16C17105.1°75.2°
C31N3C30C270.0°174.2°
C31N3C30C32160.1°180.0°
C31N3C30C29179.9°5.8°
N3C31H37H38120.0°120.0°
N3C31H37H39120.0°120.1°
N3C31H38H39120.0°120.0°
C31N3C32H40180.0°174.9°
C31N3C32H4160.0°65.1°
C31N3C32H4260.0°55.0°
C27C26C25H34180.0°179.9°
C26C27C30H35180.0°180.0°
C27C26C25C16178.6°180.0°
C27C26C25C280.3°0.1°
C26C27C30N3179.9°180.0°
C26C27C30C290.0°0.0°
C25C26C27C300.3°0.0°
C26C25C16C154.5°0.1°
C26C25C16C28178.9°179.9°
C26C25C16C17179.7°179.8°
C26C25C28C290.1°0.1°
C26C25C28O7179.4°180.0°
C25C26C27H35179.7°180.0°
C27C30N3C29179.8°180.0°
C27C30N3C32160.1°5.8°
C27C30C29C280.2°0.0°
C30C27C26H34179.7°180.0°
C27C30C29H36179.8°180.0°
C15C16C25C17175.2°179.7°
C15C16C25C28174.4°180.0°
C15C16C17C184.9°0.0°
C15C16C17C24174.3°180.0°
C16C15C33H433.4°0.0°
C16C25C28C29178.9°180.0°
C16C25C28O70.4°0.1°
C25C16C17C18179.9°179.7°
C25C16C17C240.8°0.3°
C16C25C26H341.4°0.1°
C25C28C29C300.1°0.0°
C28C25C16C170.8°0.3°
C25C28C29O7179.3°180.0°
C25C28O7C240.1°0.1°
C28C25C26H34179.7°180.0°
C25C28C29H36179.8°180.0°
N3C30C29C28179.7°180.0°
N3C30C27H350.1°0.0°
N3C30C29H360.4°0.0°
C30N3C31H37180.0°90.0°
C30N3C31H3860.0°30.0°
C30N3C31H3960.0°149.9°
C30N3C32H4019.1°5.1°
C30N3C32H41139.1°114.9°
C30N3C32H42100.9°125.0°
C29C30N3C3219.8°174.2°
C30C29C28H36180.0°180.0°
C30C29C28O7179.2°180.0°
C29C30C27H35180.0°180.0°
C32N3C31H3719.2°90.0°
C32N3C31H38139.2°150.0°
C32N3C31H39100.8°30.1°
N3C32H40H41120.0°120.0°
N3C32H40H42120.0°120.0°
N3C32H41H42120.0°120.0°
C16C17C18C24179.2°180.0°
C16C17C18C19179.1°180.0°
C16C17C24O70.3°0.1°
C16C17C24C23179.1°179.9°
C16C17C18H250.9°0.0°
C29C28O7C24179.4°179.8°
C28O7C24C170.1°0.1°
C28O7C24C23179.6°179.9°
O7C28C29H360.9°0.0°
C17C18C19H25180.0°179.9°
C18C17C24O7179.5°179.9°
C18C17C24C230.1°0.1°
C17C18C19C200.1°0.0°
C17C18C19H26179.9°180.0°
C24C17C18C190.1°0.0°
C17C24O7C23179.5°180.0°
C17C24C23C200.0°0.1°
C24C17C18H25179.9°180.0°
C17C24C23H33180.0°180.0°
C18C19C20H26180.0°180.0°
C18C19C20C230.0°0.0°
C18C19C20N2179.4°180.0°
O7C24C23C20179.5°179.9°
O7C24C23H330.6°0.0°
C24C23C20C190.0°0.1°
C24C23C20H33180.0°179.9°
C24C23C20N2179.5°180.0°
C19C20C23N2179.5°180.0°
C19C20N2C211.1°0.0°
C19C20N2C22152.7°180.0°
C20C19C18H25180.0°179.9°
C19C20C23H33179.9°180.0°
C23C20N2C21178.3°180.0°
C23C20N2C2227.9°0.1°
C23C20C19H26180.0°180.0°
C20N2C21C22155.2°180.0°
N2C20C19H260.6°0.0°
C20N2C21H27180.0°180.0°
C20N2C21H2860.0°60.0°
C20N2C21H2960.0°60.0°
C20N2C22H30180.0°90.0°
C20N2C22H3160.0°30.1°
C20N2C22H3260.0°150.0°
N2C20C23H330.5°0.1°
N2C21H27H28120.0°120.0°
N2C21H27H29120.0°120.0°
N2C21H28H29120.0°120.0°
C21N2C22H3024.7°90.0°
C21N2C22H31144.8°150.0°
C21N2C22H3295.3°30.0°
C22N2C21H2724.8°0.0°
C22N2C21H2895.2°120.0°
C22N2C21H29144.8°119.9°
N2C22H30H31120.0°120.0°
N2C22H30H32120.0°120.0°
N2C22H31H32120.0°120.0°
H1N1C8H4141.6°105.0°
H1N1C8H598.9°135.0°
H2C7C8H4179.2°180.0°
H2C7C8H561.3°60.0°
H2C7C6H1467.4°180.0°
H2C7C6H15173.8°60.0°
H3C7C8H460.3°60.0°
H3C7C8H5179.9°180.0°
H3C7C6H1451.4°59.9°
H3C7C6H1567.4°180.0°
H6C9H7H8120.0°120.0°
H9C1C2H20138.9°65.0°
H9C1C2H2118.9°55.0°
H9C1NH22121.2°120.0°
H10C1C2H20101.9°175.0°
H10C1C2H21138.1°64.9°
H10C1NH222.0°120.0°
H12C5C6H14171.9°179.9°
H12C5C6H1569.2°60.0°
H13C5C6H1452.0°59.9°
H13C5C6H15170.8°180.0°
H16C4C3H18166.1°64.9°
H16C4C3H1974.0°55.0°
H17C4C3H1846.6°175.0°
H17C4C3H19166.5°65.0°
H23C11C12H240.2°0.0°
H25C18C19H260.0°0.0°
H27C21H28H29120.0°120.0°
H30C22H31H32120.0°120.0°
H34C26C27H350.3°0.0°
H37C31H38H39120.0°120.0°
H40C32H41H42119.9°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon