IYR
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.47Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.51Å | 1.50Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CB | CC | sing | 1.51Å | 1.42Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CB | HB3 | sing | 1.09Å | 1.11Å | |
CC | CD | doub | 1.38Å | 1.33Å | Aromatic |
CC | CH | sing | 1.38Å | 1.38Å | Aromatic |
CD | CE | sing | 1.38Å | 1.32Å | Aromatic |
CD | HD | sing | 1.08Å | 1.10Å | |
CE | IE | sing | 2.09Å | 1.98Å | |
CE | CF | doub | 1.39Å | 1.36Å | Aromatic |
CF | OF | sing | 1.36Å | 1.43Å | |
CF | CG | sing | 1.39Å | 1.37Å | Aromatic |
OF | HF | sing | 0.97Å | 0.95Å | |
CG | CH | doub | 1.38Å | 1.39Å | Aromatic |
CG | HG | sing | 1.08Å | 1.10Å | |
CH | HH | sing | 1.08Å | 1.10Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.23Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 113.4° | 106.7° |
CA | N | H2 | 110.7° | 106.7° |
N | CA | CB | 113.4° | 109.5° |
N | CA | C | 110.3° | 109.5° |
N | CA | HA | 105.3° | 109.4° |
H | N | H2 | 110.8° | 106.7° |
CB | CA | C | 106.7° | 109.5° |
CB | CA | HA | 109.1° | 109.5° |
CA | CB | CC | 98.7° | 109.5° |
CA | CB | HB2 | 116.4° | 109.4° |
CA | CB | HB3 | 116.3° | 109.5° |
C | CA | HA | 112.2° | 109.5° |
CA | C | O | 120.3° | 120.0° |
CA | C | OXT | 119.2° | 120.0° |
CC | CB | HB2 | 116.4° | 109.5° |
CC | CB | HB3 | 116.3° | 109.5° |
CB | CC | CD | 117.7° | 120.0° |
CB | CC | CH | 122.1° | 119.9° |
HB2 | CB | HB3 | 94.1° | 109.5° |
CD | CC | CH | 120.2° | 120.1° |
CC | CD | CE | 120.6° | 120.1° |
CC | CD | HD | 120.1° | 119.9° |
CC | CH | CG | 119.2° | 120.0° |
CC | CH | HH | 119.8° | 119.9° |
CE | CD | HD | 119.3° | 120.0° |
CD | CE | IE | 116.1° | 120.0° |
CD | CE | CF | 122.6° | 119.9° |
IE | CE | CF | 121.3° | 120.0° |
CE | CF | OF | 120.2° | 120.1° |
CE | CF | CG | 118.4° | 119.9° |
OF | CF | CG | 121.4° | 120.0° |
CF | OF | HF | 120.2° | 106.8° |
CF | CG | CH | 119.1° | 119.9° |
CF | CG | HG | 119.7° | 120.1° |
CH | CG | HG | 121.2° | 120.0° |
CG | CH | HH | 121.0° | 120.0° |
O | C | OXT | 120.5° | 120.0° |
C | OXT | HXT | 119.2° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.2° | 113.8° |
N | CA | CB | C | 121.6° | 120.0° |
N | CA | CB | HA | 117.0° | 120.0° |
N | CA | C | HA | 117.1° | 120.0° |
N | CA | CB | CC | 122.3° | 60.0° |
N | CA | CB | HB2 | 3.0° | 60.0° |
N | CA | CB | HB3 | 112.5° | 180.0° |
N | CA | C | O | 93.4° | 29.9° |
N | CA | C | OXT | 87.3° | 149.9° |
H | N | CA | CB | 180.0° | 53.7° |
H | N | CA | C | 60.5° | 173.7° |
H | N | CA | HA | 60.8° | 66.3° |
H2 | N | CA | CB | 54.8° | 60.1° |
H2 | N | CA | C | 174.3° | 60.0° |
H2 | N | CA | HA | 64.4° | 179.9° |
CB | CA | C | HA | 119.4° | 120.0° |
CA | CB | CC | HB2 | 125.3° | 119.9° |
CA | CB | CC | HB3 | 125.2° | 120.0° |
CA | CB | HB2 | HB3 | 122.1° | 120.0° |
CA | CB | CC | CD | 56.0° | 90.3° |
CA | CB | CC | CH | 124.8° | 90.0° |
CB | CA | C | O | 143.1° | 90.1° |
CB | CA | C | OXT | 36.2° | 90.0° |
C | CA | CB | CC | 116.1° | 180.0° |
C | CA | CB | HB2 | 118.6° | 60.0° |
C | CA | CB | HB3 | 9.1° | 59.9° |
CA | C | O | OXT | 179.3° | 179.8° |
CA | C | OXT | HXT | 179.9° | 180.0° |
HA | CA | CB | CC | 5.3° | 60.0° |
HA | CA | CB | HB2 | 120.0° | 180.0° |
HA | CA | CB | HB3 | 130.5° | 60.0° |
HA | CA | C | O | 23.7° | 149.9° |
HA | CA | C | OXT | 155.6° | 29.9° |
CC | CB | HB2 | HB3 | 122.1° | 120.1° |
CB | CC | CD | CH | 179.3° | 179.7° |
CB | CC | CD | CE | 179.8° | 179.8° |
CB | CC | CD | HD | 0.2° | 0.2° |
CB | CC | CH | CG | 179.8° | 180.0° |
CB | CC | CH | HH | 0.2° | 0.0° |
HB2 | CB | CC | CD | 69.3° | 149.8° |
HB2 | CB | CC | CH | 109.9° | 30.0° |
HB3 | CB | CC | CD | 178.8° | 29.7° |
HB3 | CB | CC | CH | 0.4° | 150.0° |
CC | CD | CE | HD | 180.0° | 179.5° |
CC | CD | CE | IE | 179.4° | 179.8° |
CC | CD | CE | CF | 0.7° | 0.5° |
CD | CC | CH | CG | 1.0° | 0.2° |
CD | CC | CH | HH | 179.1° | 179.8° |
CH | CC | CD | CE | 0.9° | 0.5° |
CH | CC | CD | HD | 179.1° | 180.0° |
CC | CH | CG | CF | 0.8° | 0.0° |
CC | CH | CG | HH | 180.0° | 180.0° |
CC | CH | CG | HG | 179.2° | 179.9° |
CD | CE | IE | CF | 178.7° | 179.7° |
CD | CE | CF | OF | 179.7° | 179.8° |
CD | CE | CF | CG | 0.6° | 0.3° |
HD | CD | CE | IE | 0.6° | 0.3° |
HD | CD | CE | CF | 179.3° | 179.9° |
IE | CE | CF | OF | 1.7° | 0.1° |
IE | CE | CF | CG | 179.1° | 180.0° |
CE | CF | OF | CG | 179.1° | 179.9° |
CE | CF | OF | HF | 179.9° | 90.0° |
CE | CF | CG | CH | 0.6° | 0.1° |
CE | CF | CG | HG | 179.4° | 179.9° |
OF | CF | CG | CH | 179.7° | 180.0° |
OF | CF | CG | HG | 0.2° | 0.0° |
CG | CF | OF | HF | 0.8° | 90.1° |
CF | CG | CH | HG | 180.0° | 180.0° |
CF | CG | CH | HH | 179.2° | 180.0° |
HG | CG | CH | HH | 0.8° | 0.1° |
O | C | OXT | HXT | 0.7° | 0.2° |