Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

IN5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1N1doub1.32Å1.41ÅAromatic
C1C5sing1.38Å1.40ÅAromatic
C1H1sing1.08Å1.10Å
C2C3doub1.39Å1.41ÅAromatic
C2N1sing1.32Å1.40ÅAromatic
C2C6sing1.51Å1.51Å
C3C4sing1.39Å1.42ÅAromatic
C3O1sing1.36Å1.39Å
O4P1doub1.48Å1.59Å
O5P1sing1.61Å1.59Å
O5HO5sing0.97Å0.95Å
C7C5sing1.51Å1.51Å
C7O2sing1.43Å1.43Å
C7H71sing1.09Å1.12Å
C7H72sing1.09Å1.11Å
C8C4sing1.51Å1.48Å
C8N2sing1.47Å1.34Å
C8H81sing1.09Å1.12Å
C8H82sing1.09Å1.12Å
C9C10sing1.53Å1.55Å
C9N2sing1.47Å1.44Å
C9P2sing1.82Å1.82Å
C9H9sing1.09Å1.12Å
C10H101sing1.09Å1.11Å
C10H102sing1.09Å1.12Å
C10H103sing1.09Å1.11Å
C4C5doub1.38Å1.43ÅAromatic
O1HO1sing0.97Å0.95Å
C6H61sing1.09Å1.11Å
C6H62sing1.09Å1.12Å
C6H63sing1.09Å1.11Å
O2P1sing1.61Å1.55Å
N2HN2sing1.01Å1.02Å
P1O3sing1.61Å1.59Å
O3HO3sing0.97Å0.95Å
P2O6doub1.48Å1.54Å
P2O7sing1.61Å1.55Å
P2O8sing1.61Å1.57Å
O7HO7sing0.97Å0.95Å
O8HO8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C1C5119.8°120.9°
N1C1H1120.5°119.5°
C1N1C2121.2°121.8°
C5C1H1119.7°119.5°
C1C5C7117.3°120.4°
C1C5C4119.7°119.2°
C3C2N1119.8°120.7°
C3C2C6118.6°119.7°
C2C3C4119.7°119.1°
C2C3O1120.1°120.4°
N1C2C6121.7°119.6°
C2C6H61118.6°109.5°
C2C6H62108.9°109.5°
C2C6H63108.9°109.5°
C4C3O1120.3°120.5°
C3C4C8120.8°120.8°
C3C4C5119.9°118.3°
C3O1HO1120.0°106.8°
O4P1O5109.6°109.5°
O4P1O2107.9°109.5°
O4P1O3110.7°109.5°
P1O5HO5109.6°106.8°
O5P1O2109.6°109.5°
O5P1O3108.4°109.5°
C5C7O2107.7°109.4°
C5C7H71112.9°109.4°
C5C7H72112.9°109.4°
C7C5C4123.0°120.3°
O2C7H71112.8°109.5°
O2C7H72112.9°109.5°
C7O2P1119.4°106.8°
H71C7H7297.6°109.5°
C4C8N2121.5°109.5°
C4C8H81107.9°109.5°
C4C8H82107.9°109.4°
C8C4C5119.3°120.9°
N2C8H81107.9°109.5°
N2C8H82107.9°109.5°
C8N2C9121.0°106.7°
C8N2HN2108.0°106.6°
H81C8H82101.9°109.5°
C10C9N2110.3°109.5°
C10C9P2100.3°109.5°
C10C9H9114.3°109.5°
C9C10H101110.3°109.5°
C9C10H102111.9°109.5°
C9C10H103111.9°109.5°
N2C9P2108.3°109.5°
N2C9H9107.1°109.4°
C9N2HN2108.1°106.8°
P2C9H9116.2°109.5°
C9P2O6116.5°109.5°
C9P2O799.8°109.5°
C9P2O8107.9°109.5°
H101C10H102111.9°109.5°
H101C10H103111.9°109.5°
H102C10H10398.5°109.5°
H61C6H62108.9°109.4°
H61C6H63108.9°109.5°
H62C6H63101.2°109.5°
O2P1O3110.7°109.5°
P1O3HO3110.7°106.8°
O6P2O7116.7°109.5°
O6P2O8112.1°109.5°
O7P2O8102.2°109.5°
P2O7HO799.8°106.8°
P2O8HO8107.8°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C1C5H1180.0°179.8°
C1N1C2C30.0°0.1°
C1N1C2C6179.7°180.0°
N1C1C5C7179.5°180.0°
N1C1C5C40.2°0.4°
C5C1N1C20.1°0.2°
C1C5C4C30.2°0.4°
C1C5C7C4179.3°179.6°
C1C5C7O2119.6°0.0°
C1C5C7H715.6°119.9°
C1C5C7H72115.1°120.1°
C1C5C4C8179.8°179.8°
H1C1N1C2179.9°180.0°
H1C1C5C70.5°0.2°
H1C1C5C4179.8°179.8°
C3C2N1C6179.7°179.9°
C2C3C4O1179.8°179.9°
C2C3C4C8179.9°180.0°
C2C3C4C50.1°0.2°
C2C3O1HO1180.0°89.9°
C3C2C6H61180.0°90.1°
C3C2C6H6254.8°150.0°
C3C2C6H6354.7°29.9°
N1C2C3C40.0°0.1°
N1C2C3O1179.9°180.0°
N1C2C6H610.2°90.0°
N1C2C6H62125.0°30.0°
N1C2C6H63125.5°150.0°
C6C2C3C4179.7°180.0°
C6C2C3O10.1°0.1°
C2C6H61H62125.2°120.0°
C2C6H61H63125.2°120.0°
C2C6H62H63114.6°120.0°
C3C4C5C7179.4°180.0°
C3C4C8C5180.0°179.8°
C3C4C8N21.9°90.0°
C3C4C8H81127.2°30.1°
C3C4C8H82123.4°150.0°
C4C3O1HO10.2°90.0°
O1C3C4C80.1°0.1°
O1C3C4C5179.9°179.7°
O4P1O5O2118.2°120.0°
O4P1O5O3120.9°120.0°
O4P1O5HO5180.0°60.0°
O4P1O2C762.2°60.0°
O4P1O2O3121.2°120.0°
O4P1O3HO3180.0°180.0°
O5P1O2C7178.5°180.0°
O5P1O2O3119.5°120.0°
O5P1O3HO359.8°60.0°
HO5O5P1O261.8°180.0°
HO5O5P1O359.1°60.0°
C5C7O2H71125.3°119.9°
C5C7O2H72125.3°120.0°
C5C7H71H72118.8°120.0°
C7C5C4C80.6°0.2°
C5C7O2P1166.4°180.0°
O2C7H71H72118.7°120.1°
O2C7C5C459.7°179.5°
C7O2P1O359.0°60.0°
H71C7C5C4175.1°60.5°
H71C7O2P168.4°60.1°
H72C7C5C465.6°59.5°
H72C7O2P141.0°60.0°
C4C8N2H81125.3°120.0°
C4C8N2H82125.3°119.9°
C4C8H81H82113.5°119.9°
C4C8N2C9153.4°180.0°
C4C8N2HN228.1°66.1°
N2C8H81H82113.5°120.1°
C8N2C9C1070.7°150.0°
C8N2C9HN2125.2°113.7°
C8N2C9P2179.6°90.0°
C8N2C9H954.3°30.0°
N2C8C4C5178.1°90.2°
H81C8N2C928.1°60.0°
H81C8C4C552.8°149.7°
H81C8N2HN297.1°173.9°
H82C8N2C981.3°60.0°
H82C8C4C556.6°29.8°
H82C8N2HN2153.4°53.8°
C10C9N2P2108.9°120.0°
C10C9N2H9125.0°120.0°
C10C9P2H9123.8°120.0°
C9C10H101H102125.2°120.0°
C9C10H101H103125.3°120.0°
C9C10H102H103117.8°120.0°
C10C9N2HN2164.0°96.3°
C10C9P2O651.3°180.0°
C10C9P2O7177.9°60.0°
C10C9P2O875.8°60.1°
N2C9P2H9120.6°119.9°
N2C9C10H101180.0°60.0°
N2C9C10H10254.8°180.0°
N2C9C10H10354.7°60.0°
N2C9P2O6166.9°60.0°
N2C9P2O766.5°180.0°
N2C9P2O839.8°60.0°
P2C9C10H10165.9°60.0°
P2C9C10H102168.9°60.0°
P2C9C10H10359.4°180.0°
P2C9N2HN255.1°23.8°
C9P2O6O7117.7°120.0°
C9P2O6O8124.9°120.0°
C9P2O7O8110.9°120.0°
C9P2O7HO7180.0°180.0°
C9P2O8HO8180.0°60.0°
H9C9C10H10159.2°179.9°
H9C9C10H10266.1°60.0°
H9C9C10H103175.5°60.0°
H9C9N2HN270.9°143.7°
H9C9P2O672.6°60.0°
H9C9P2O754.1°60.0°
H9C9P2O8160.4°179.9°
H101C10H102H103117.8°120.0°
H61C6H62H63114.7°120.0°
O2P1O3HO360.4°60.0°
O6P2O7O8122.7°120.0°
O6P2O7HO753.5°60.0°
O6P2O8HO850.4°180.0°
O7P2O8HO875.3°60.0°
O8P2O7HO769.2°59.9°

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon