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IMQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9N1doub1.34Å1.35ÅAromatic
C9C4sing1.42Å1.39ÅAromatic
C9C8sing1.41Å1.40ÅAromatic
N1C10sing1.31Å1.32ÅAromatic
C10C2doub1.39Å1.39ÅAromatic
C2C3sing1.37Å1.39ÅAromatic
C3C4doub1.41Å1.39ÅAromatic
C4C5sing1.40Å1.40ÅAromatic
C5C6doub1.36Å1.39ÅAromatic
C6C7sing1.39Å1.39ÅAromatic
C7C8doub1.36Å1.40ÅAromatic
C8C1sing1.51Å1.54Å
C1N4'sing1.47Å1.50Å
N4'C1'sing1.48Å1.46Å
N4'C4'sing1.47Å1.48Å
C1'C2'sing1.55Å1.53Å
C2'O2'sing1.43Å1.44Å
C2'C3'sing1.55Å1.55Å
C3'O3'sing1.43Å1.44Å
C3'C4'sing1.54Å1.55Å
C4'C5'sing1.53Å1.54Å
C5'O5'sing1.43Å1.43Å
C10H10sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C1'H1'sing1.09Å1.10Å
C1'H1'Asing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O5'HO5'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C9C4119.2°119.8°
N1C9C8120.5°121.1°
C9N1C10122.6°121.3°
C4C9C8120.2°119.1°
C9C4C3119.2°119.0°
C9C4C5120.5°119.6°
C9C8C7118.7°119.8°
C9C8C1124.4°120.1°
N1C10C2120.5°121.8°
N1C10H10119.7°119.1°
C10C2C3118.7°119.9°
C2C10H10119.8°119.1°
C10C2H2120.7°120.0°
C2C3C4119.7°118.2°
C3C2H2120.6°120.1°
C2C3H3120.1°120.9°
C3C4C5120.2°121.4°
C4C3H3120.2°120.9°
C4C5C6119.5°119.6°
C4C5H5120.2°120.1°
C5C6C7120.1°120.8°
C6C5H5120.3°120.2°
C5C6H6119.9°119.6°
C6C7C8120.9°121.1°
C7C6H6119.9°119.6°
C6C7H7119.5°119.4°
C7C8C1117.0°120.2°
C8C7H7119.6°119.5°
C8C1N4'115.6°109.5°
C8C1H1107.5°109.4°
C8C1H1A106.0°109.5°
C1N4'C1'117.1°111.0°
C1N4'C4'120.3°111.0°
N4'C1H1107.5°109.5°
N4'C1H1A106.1°109.5°
C1'N4'C4'111.5°108.6°
N4'C1'C2'101.5°104.8°
N4'C1'H1'112.2°110.4°
N4'C1'H1'A113.9°110.4°
N4'C4'C3'102.6°107.2°
N4'C4'C5'114.1°109.9°
N4'C4'H4'110.9°109.9°
C1'C2'O2'108.7°111.0°
C1'C2'C3'106.6°101.6°
C2'C1'H1'112.2°110.4°
C2'C1'H1'A113.9°110.4°
C1'C2'H2'113.2°111.0°
O2'C2'C3'113.1°111.0°
O2'C2'H2'106.7°110.8°
C2'O2'HO2'109.5°114.0°
C2'C3'O3'111.6°110.7°
C2'C3'C4'106.0°103.0°
C3'C2'H2'108.8°111.0°
C2'C3'H3'111.0°110.7°
O3'C3'C4'111.2°110.7°
O3'C3'H3'105.8°110.6°
C3'O3'HO3'109.5°114.0°
C3'C4'C5'108.8°109.9°
C4'C3'H3'111.3°110.9°
C3'C4'H4'115.9°109.9°
C4'C5'O5'110.7°109.5°
C5'C4'H4'104.9°110.0°
C4'C5'H5'109.1°109.5°
C4'C5'H5'A108.8°109.5°
O5'C5'H5'109.1°109.5°
O5'C5'H5'A108.8°109.5°
C5'O5'HO5'109.5°114.0°
H1C1H1A114.4°109.5°
H1'C1'H1'A103.4°110.4°
H5'C5'H5'A110.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C9C4C8179.7°179.7°
C9N1C10C20.3°0.0°
N1C9C4C30.2°0.0°
N1C9C4C5180.0°180.0°
N1C9C8C7179.2°179.7°
N1C9C8C10.5°0.0°
C9N1C10H10179.7°180.0°
C4C9N1C100.4°0.0°
C9C4C3C20.1°0.0°
C9C4C3C5179.8°180.0°
C9C4C5C60.2°0.0°
C4C9C8C71.1°0.6°
C4C9C8C1179.8°179.7°
C9C4C3H3179.9°179.9°
C9C4C5H5179.8°180.0°
C8C9N1C10179.2°179.7°
C8C9C4C3179.5°179.7°
C8C9C4C50.4°0.3°
C9C8C7C61.3°0.6°
C9C8C7C1178.7°179.7°
C9C8C1N4'81.3°80.0°
C9C8C7H7178.6°179.7°
C9C8C1H1158.7°160.0°
C9C8C1H1A35.9°40.1°
N1C10C2H10180.0°180.0°
N1C10C2C30.0°0.0°
N1C10C2H2180.0°180.0°
C10C2C3H2180.0°180.0°
C10C2C3C40.2°0.0°
C10C2C3H3179.8°180.0°
C2C3C4H3180.0°179.9°
C2C3C4C5179.8°180.0°
C3C2C10H10180.0°180.0°
C3C4C5C6179.9°180.0°
C4C3C2H2179.8°180.0°
C3C4C5H50.1°0.0°
C4C5C6H5180.0°180.0°
C4C5C6C70.0°0.0°
C5C4C3H30.2°0.1°
C4C5C6H6180.0°180.0°
C5C6C7H6180.0°180.0°
C5C6C7C80.8°0.3°
C5C6C7H7179.2°180.0°
C6C7C8H7180.0°179.7°
C6C7C8C1179.9°179.7°
C7C6C5H5180.0°180.0°
C7C8C1N4'100.0°100.3°
C8C7C6H6179.2°179.7°
C7C8C1H120.0°19.7°
C7C8C1H1A142.8°139.7°
C8C1N4'H1120.0°119.9°
C8C1N4'H1A117.2°120.0°
C8C1N4'C1'34.4°67.5°
C8C1N4'C4'106.5°171.7°
C1C8C7H70.1°0.0°
C8C1H1H1A117.4°120.0°
C1N4'C1'C4'144.1°122.2°
C1N4'C1'C2'179.9°146.3°
C1N4'C4'C3'172.9°123.3°
C1N4'C4'C5'55.3°3.9°
N4'C1H1H1A117.5°120.1°
C1N4'C1'H1'59.8°94.8°
C1N4'C1'H1'A57.3°27.5°
C1N4'C4'H4'62.8°117.3°
N4'C1'C2'H1'120.0°118.8°
N4'C1'C2'H1'A122.8°118.8°
N4'C1'C2'O2'95.6°81.0°
N4'C1'C2'C3'26.7°37.1°
C1'N4'C4'C3'30.0°1.0°
C1'N4'C4'C5'87.5°118.4°
C1'N4'C1H1154.4°52.5°
C1'N4'C1H1A82.8°172.5°
N4'C1'H1'H1'A123.2°122.3°
N4'C1'C2'H2'146.2°155.2°
C1'N4'C4'H4'154.4°120.4°
C4'N4'C1'C2'36.0°24.1°
N4'C4'C3'C2'10.7°22.3°
N4'C4'C3'O3'110.7°140.7°
N4'C4'C3'C5'121.2°119.4°
N4'C4'C3'H4'121.0°119.4°
N4'C4'C5'H4'121.5°121.1°
N4'C4'C5'O5'81.0°65.8°
C4'N4'C1H113.5°68.4°
C4'N4'C1H1A136.3°51.7°
C4'N4'C1'H1'156.0°142.9°
C4'N4'C1'H1'A86.8°94.7°
N4'C4'C3'H3'131.6°96.2°
N4'C4'C5'H5'159.0°54.2°
N4'C4'C5'H5'A38.5°174.2°
C1'C2'O2'C3'118.2°112.3°
C1'C2'O2'H2'122.3°123.8°
C1'C2'C3'H2'122.3°118.1°
C1'C2'C3'O3'131.1°154.0°
C1'C2'C3'C4'9.8°35.6°
C2'C1'H1'H1'A123.2°122.3°
C1'C2'O2'HO2'102.3°61.4°
C1'C2'C3'H3'111.2°82.9°
O2'C2'C3'H2'118.3°123.8°
O2'C2'C3'O3'11.7°35.9°
O2'C2'C3'C4'109.6°82.5°
O2'C2'C1'H1'24.5°37.8°
O2'C2'C1'H1'A141.6°160.1°
O2'C2'C3'H3'129.4°159.0°
C2'C3'O3'C4'118.2°113.6°
C2'C3'O3'H3'120.8°123.1°
C2'C3'C4'H3'120.8°118.4°
C2'C3'C4'C5'110.4°141.7°
C3'C2'C1'H1'146.7°155.9°
C3'C2'C1'H1'A96.2°81.8°
C3'C2'O2'HO2'15.9°173.7°
C2'C3'O3'HO3'159.2°61.4°
C2'C3'C4'H4'131.7°97.1°
O3'C3'C4'H3'117.7°123.2°
O3'C3'C4'C5'128.1°99.9°
O3'C3'C2'H2'106.6°87.9°
O3'C3'C4'H4'10.2°21.3°
C3'C4'C5'H4'124.6°121.1°
C3'C4'C5'O5'165.1°52.0°
C4'C3'C2'H2'132.2°153.7°
C4'C3'O3'HO3'41.0°175.0°
C3'C4'C5'H5'45.1°172.0°
C3'C4'C5'H5'A75.4°68.0°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A119.5°120.0°
C5'C4'C3'H3'10.4°23.3°
C4'C5'H5'H5'A119.5°120.0°
C4'C5'O5'HO5'131.0°180.0°
O5'C5'C4'H4'40.5°173.1°
O5'C5'H5'H5'A119.5°120.0°
H10C10C2H20.0°0.0°
H2C2C3H30.2°0.1°
H5C5C6H60.0°0.0°
H6C6C7H70.8°0.0°
H1'C1'C2'H2'93.8°86.0°
H1'AC1'C2'H2'23.3°36.4°
H2'C2'O2'HO2'135.4°62.4°
H2'C2'C3'H3'11.1°35.2°
H3'C3'O3'HO3'80.0°61.7°
H3'C3'C4'H4'107.5°144.4°
H4'C4'C5'H5'79.5°67.0°
H4'C4'C5'H5'A160.0°53.1°
H5'C5'O5'HO5'109.0°60.0°
H5'AC5'O5'HO5'11.5°60.0°

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PDB entries from 2024-07-17

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