IM5
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | N1 | sing | 1.36Å | 1.36Å | |
| N1 | C6 | sing | 1.35Å | 1.34Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N2 | C2 | sing | 1.37Å | 1.34Å | |
| N3 | C2 | doub | 1.31Å | 1.34Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| N3 | C4 | sing | 1.35Å | 1.35Å | |
| C9 | C4 | sing | 1.41Å | 1.47Å | Aromatic |
| C4 | C5 | doub | 1.40Å | 1.46Å | Aromatic |
| C5 | N7 | sing | 1.38Å | 1.33Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.48Å | |
| C6 | O6 | doub | 1.22Å | 1.26Å | |
| C8 | N7 | sing | 1.36Å | 1.36Å | Aromatic |
| C9 | C8 | doub | 1.35Å | 1.39Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C10 | C9 | sing | 1.51Å | 1.51Å | |
| C10 | N1' | sing | 1.47Å | 1.44Å | |
| N1' | C2' | sing | 1.49Å | 1.47Å | |
| N1' | C6' | sing | 1.49Å | 1.47Å | |
| C10 | H10 | sing | 1.09Å | 1.10Å | |
| C10 | H10A | sing | 1.09Å | 1.10Å | |
| C2' | C3' | sing | 1.54Å | 1.52Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| O3' | C3' | sing | 1.43Å | 1.43Å | |
| C3' | C4' | sing | 1.54Å | 1.52Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C6' | C4' | sing | 1.54Å | 1.52Å | |
| C4' | C5' | sing | 1.53Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å | |
| C6' | H6' | sing | 1.09Å | 1.10Å | |
| C6' | H6'A | sing | 1.09Å | 1.10Å | |
| N7 | HN7 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 124.0° | 120.4° |
| C2 | N1 | HN1 | 118.0° | 119.8° |
| N1 | C2 | N2 | 119.8° | 119.1° |
| N1 | C2 | N3 | 122.9° | 121.9° |
| C6 | N1 | HN1 | 118.0° | 119.8° |
| N1 | C6 | C5 | 117.0° | 118.5° |
| N1 | C6 | O6 | 121.4° | 120.8° |
| N2 | C2 | N3 | 117.3° | 119.0° |
| C2 | N2 | HN2 | 120.0° | 120.0° |
| C2 | N2 | HN2A | 120.0° | 120.1° |
| C2 | N3 | C4 | 117.9° | 120.9° |
| HN2 | N2 | HN2A | 120.0° | 119.9° |
| N3 | C4 | C9 | 130.2° | 133.9° |
| N3 | C4 | C5 | 123.3° | 119.6° |
| C9 | C4 | C5 | 106.5° | 106.6° |
| C4 | C9 | C8 | 104.2° | 108.0° |
| C4 | C9 | C10 | 126.9° | 126.0° |
| C4 | C5 | N7 | 106.9° | 107.3° |
| C4 | C5 | C6 | 114.9° | 118.7° |
| N7 | C5 | C6 | 138.2° | 134.0° |
| C5 | N7 | C8 | 111.2° | 108.7° |
| C5 | N7 | HN7 | 124.4° | 125.7° |
| C5 | C6 | O6 | 121.7° | 120.7° |
| N7 | C8 | C9 | 111.1° | 109.5° |
| N7 | C8 | H8 | 124.4° | 125.2° |
| C8 | N7 | HN7 | 124.4° | 125.6° |
| C9 | C8 | H8 | 124.4° | 125.3° |
| C8 | C9 | C10 | 128.8° | 126.0° |
| C9 | C10 | N1' | 115.3° | 109.4° |
| C9 | C10 | H10 | 108.0° | 109.4° |
| C9 | C10 | H10A | 108.0° | 109.5° |
| C10 | N1' | C2' | 111.7° | 111.0° |
| C10 | N1' | C6' | 113.4° | 110.9° |
| N1' | C10 | H10 | 108.0° | 109.5° |
| N1' | C10 | H10A | 108.0° | 109.5° |
| C2' | N1' | C6' | 107.4° | 104.2° |
| N1' | C2' | C3' | 100.2° | 104.6° |
| N1' | C2' | H2' | 111.7° | 110.3° |
| N1' | C2' | H2'A | 111.7° | 110.4° |
| N1' | C6' | C4' | 103.1° | 104.6° |
| N1' | C6' | H6' | 111.0° | 110.5° |
| N1' | C6' | H6'A | 111.1° | 110.4° |
| H10 | C10 | H10A | 109.5° | 109.5° |
| C3' | C2' | H2' | 111.8° | 110.4° |
| C3' | C2' | H2'A | 111.7° | 110.4° |
| C2' | C3' | O3' | 108.5° | 110.3° |
| C2' | C3' | C4' | 105.6° | 105.1° |
| C2' | C3' | H3' | 110.8° | 110.3° |
| H2' | C2' | H2'A | 109.5° | 110.5° |
| O3' | C3' | C4' | 108.8° | 110.3° |
| O3' | C3' | H3' | 112.1° | 110.3° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | H3' | 110.8° | 110.3° |
| C3' | C4' | C6' | 105.8° | 105.1° |
| C3' | C4' | C5' | 111.2° | 110.3° |
| C3' | C4' | H4' | 110.5° | 110.3° |
| C6' | C4' | C5' | 108.2° | 110.3° |
| C6' | C4' | H4' | 110.4° | 110.4° |
| C4' | C6' | H6' | 111.1° | 110.4° |
| C4' | C6' | H6'A | 111.0° | 110.4° |
| C5' | C4' | H4' | 110.5° | 110.2° |
| C4' | C5' | O5' | 107.7° | 109.4° |
| C4' | C5' | H5' | 109.9° | 109.4° |
| C4' | C5' | H5'A | 109.9° | 109.4° |
| O5' | C5' | H5' | 109.9° | 109.5° |
| O5' | C5' | H5'A | 109.9° | 109.5° |
| C5' | O5' | HO5' | 109.5° | 113.9° |
| H5' | C5' | H5'A | 109.5° | 109.5° |
| H6' | C6' | H6'A | 109.5° | 110.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | HN1 | 180.0° | 179.7° |
| N1 | C2 | N2 | N3 | 179.7° | 179.9° |
| N1 | C2 | N2 | HN2 | 179.7° | 0.1° |
| N1 | C2 | N2 | HN2A | 0.3° | 180.0° |
| N1 | C2 | N3 | C4 | 1.0° | 0.0° |
| C2 | N1 | C6 | C5 | 0.9° | 0.1° |
| C2 | N1 | C6 | O6 | 179.5° | 179.7° |
| C6 | N1 | C2 | N2 | 179.5° | 179.9° |
| C6 | N1 | C2 | N3 | 0.2° | 0.1° |
| N1 | C6 | C5 | C4 | 0.5° | 0.0° |
| N1 | C6 | C5 | N7 | 178.8° | 180.0° |
| N1 | C6 | C5 | O6 | 178.6° | 179.6° |
| HN1 | N1 | C2 | N2 | 0.4° | 0.2° |
| HN1 | N1 | C2 | N3 | 179.8° | 179.7° |
| HN1 | N1 | C6 | C5 | 179.1° | 179.7° |
| HN1 | N1 | C6 | O6 | 0.5° | 0.1° |
| C2 | N2 | HN2 | HN2A | 180.0° | 179.9° |
| N2 | C2 | N3 | C4 | 179.3° | 179.9° |
| N3 | C2 | N2 | HN2 | 0.0° | 180.0° |
| N3 | C2 | N2 | HN2A | 180.0° | 0.1° |
| C2 | N3 | C4 | C9 | 180.0° | 179.9° |
| C2 | N3 | C4 | C5 | 1.4° | 0.0° |
| N3 | C4 | C9 | C5 | 178.8° | 179.9° |
| N3 | C4 | C5 | N7 | 179.9° | 180.0° |
| N3 | C4 | C5 | C6 | 0.6° | 0.0° |
| N3 | C4 | C9 | C8 | 180.0° | 180.0° |
| N3 | C4 | C9 | C10 | 3.3° | 0.1° |
| C9 | C4 | C5 | N7 | 1.0° | 0.0° |
| C9 | C4 | C5 | C6 | 179.5° | 180.0° |
| C4 | C9 | C8 | N7 | 1.1° | 0.1° |
| C4 | C9 | C8 | C10 | 176.5° | 180.0° |
| C4 | C9 | C8 | H8 | 178.9° | 180.0° |
| C4 | C9 | C10 | N1' | 85.5° | 80.0° |
| C4 | C9 | C10 | H10 | 153.6° | 160.0° |
| C4 | C9 | C10 | H10A | 35.4° | 40.0° |
| C4 | C5 | N7 | C6 | 179.3° | 180.0° |
| C4 | C5 | C6 | O6 | 179.1° | 179.6° |
| C4 | C5 | N7 | C8 | 0.3° | 0.0° |
| C5 | C4 | C9 | C8 | 1.2° | 0.0° |
| C5 | C4 | C9 | C10 | 177.8° | 180.0° |
| C4 | C5 | N7 | HN7 | 179.7° | 179.9° |
| N7 | C5 | C6 | O6 | 0.2° | 0.4° |
| C5 | N7 | C8 | HN7 | 180.0° | 179.9° |
| C5 | N7 | C8 | C9 | 0.5° | 0.1° |
| C5 | N7 | C8 | H8 | 179.5° | 180.0° |
| C6 | C5 | N7 | C8 | 179.6° | 180.0° |
| C6 | C5 | N7 | HN7 | 0.4° | 0.1° |
| N7 | C8 | C9 | H8 | 180.0° | 179.9° |
| N7 | C8 | C9 | C10 | 177.6° | 180.0° |
| C8 | C9 | C10 | N1' | 98.7° | 100.0° |
| C8 | C9 | C10 | H10 | 22.1° | 20.0° |
| C8 | C9 | C10 | H10A | 140.4° | 140.0° |
| C9 | C8 | N7 | HN7 | 179.5° | 180.0° |
| H8 | C8 | C9 | C10 | 2.4° | 0.0° |
| H8 | C8 | N7 | HN7 | 0.5° | 0.1° |
| C9 | C10 | N1' | H10 | 120.9° | 119.9° |
| C9 | C10 | N1' | H10A | 120.8° | 120.0° |
| C9 | C10 | N1' | C2' | 77.4° | 69.9° |
| C9 | C10 | N1' | C6' | 44.2° | 174.7° |
| C9 | C10 | H10 | H10A | 117.3° | 120.0° |
| C10 | N1' | C2' | C6' | 125.0° | 119.5° |
| N1' | C10 | H10 | H10A | 117.3° | 120.0° |
| C10 | N1' | C2' | C3' | 168.4° | 159.0° |
| C10 | N1' | C2' | H2' | 73.1° | 82.3° |
| C10 | N1' | C2' | H2'A | 49.9° | 40.2° |
| C10 | N1' | C6' | C4' | 159.4° | 159.0° |
| C10 | N1' | C6' | H6' | 40.4° | 40.3° |
| C10 | N1' | C6' | H6'A | 81.7° | 82.2° |
| C2' | N1' | C10 | H10 | 161.7° | 50.0° |
| C2' | N1' | C10 | H10A | 43.4° | 170.1° |
| N1' | C2' | C3' | H2' | 118.5° | 118.7° |
| N1' | C2' | C3' | H2'A | 118.5° | 118.8° |
| N1' | C2' | H2' | H2'A | 124.3° | 122.4° |
| N1' | C2' | C3' | O3' | 82.8° | 95.0° |
| N1' | C2' | C3' | C4' | 33.7° | 23.9° |
| N1' | C2' | C3' | H3' | 153.7° | 142.8° |
| C2' | N1' | C6' | C4' | 35.4° | 39.5° |
| C2' | N1' | C6' | H6' | 83.6° | 79.2° |
| C2' | N1' | C6' | H6'A | 154.4° | 158.3° |
| C6' | N1' | C10 | H10 | 76.7° | 65.3° |
| C6' | N1' | C10 | H10A | 165.0° | 54.7° |
| C6' | N1' | C2' | C3' | 43.4° | 39.5° |
| C6' | N1' | C2' | H2' | 161.9° | 158.3° |
| C6' | N1' | C2' | H2'A | 75.1° | 79.3° |
| N1' | C6' | C4' | C3' | 12.3° | 23.9° |
| N1' | C6' | C4' | H6' | 119.0° | 118.8° |
| N1' | C6' | C4' | H6'A | 119.0° | 118.8° |
| N1' | C6' | C4' | C5' | 131.6° | 142.8° |
| N1' | C6' | C4' | H4' | 107.3° | 95.1° |
| N1' | C6' | H6' | H6'A | 123.0° | 122.4° |
| C3' | C2' | H2' | H2'A | 124.3° | 122.5° |
| C2' | C3' | O3' | C4' | 114.4° | 115.7° |
| C2' | C3' | O3' | H3' | 122.7° | 122.1° |
| C2' | C3' | C4' | H3' | 120.0° | 118.9° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.4° |
| C2' | C3' | C4' | C6' | 13.4° | 0.0° |
| C2' | C3' | C4' | C5' | 103.9° | 118.9° |
| C2' | C3' | C4' | H4' | 133.0° | 119.0° |
| H2' | C2' | C3' | O3' | 35.7° | 23.7° |
| H2' | C2' | C3' | C4' | 152.2° | 142.6° |
| H2' | C2' | C3' | H3' | 87.8° | 98.5° |
| H2'A | C2' | C3' | O3' | 158.7° | 146.2° |
| H2'A | C2' | C3' | C4' | 84.8° | 94.9° |
| H2'A | C2' | C3' | H3' | 35.2° | 24.0° |
| O3' | C3' | C4' | H3' | 123.7° | 122.2° |
| O3' | C3' | C4' | C6' | 102.9° | 118.9° |
| O3' | C3' | C4' | C5' | 139.8° | 122.2° |
| O3' | C3' | C4' | H4' | 16.7° | 0.1° |
| C4' | C3' | O3' | HO3' | 65.6° | 177.1° |
| C3' | C4' | C6' | C5' | 119.3° | 118.9° |
| C3' | C4' | C6' | H4' | 119.6° | 119.0° |
| C3' | C4' | C5' | H4' | 123.1° | 122.1° |
| C3' | C4' | C5' | O5' | 168.5° | 175.0° |
| C3' | C4' | C5' | H5' | 71.8° | 55.0° |
| C3' | C4' | C5' | H5'A | 48.7° | 65.0° |
| C3' | C4' | C6' | H6' | 106.6° | 94.9° |
| C3' | C4' | C6' | H6'A | 131.3° | 142.6° |
| H3' | C3' | O3' | HO3' | 57.3° | 60.7° |
| H3' | C3' | C4' | C6' | 133.4° | 118.9° |
| H3' | C3' | C4' | C5' | 16.1° | 0.0° |
| H3' | C3' | C4' | H4' | 107.0° | 122.1° |
| C6' | C4' | C5' | H4' | 121.0° | 122.2° |
| C6' | C4' | C5' | O5' | 52.6° | 69.4° |
| C6' | C4' | C5' | H5' | 172.3° | 170.7° |
| C6' | C4' | C5' | H5'A | 67.1° | 50.7° |
| C4' | C6' | H6' | H6'A | 123.0° | 122.4° |
| C4' | C5' | O5' | H5' | 119.7° | 119.9° |
| C4' | C5' | O5' | H5'A | 119.7° | 120.0° |
| C4' | C5' | H5' | H5'A | 120.8° | 120.0° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| C5' | C4' | C6' | H6' | 12.7° | 24.0° |
| C5' | C4' | C6' | H6'A | 109.4° | 98.5° |
| H4' | C4' | C5' | O5' | 68.4° | 52.8° |
| H4' | C4' | C5' | H5' | 51.3° | 67.1° |
| H4' | C4' | C5' | H5'A | 171.9° | 172.9° |
| H4' | C4' | C6' | H6' | 133.7° | 146.1° |
| H4' | C4' | C6' | H6'A | 11.7° | 23.7° |
| O5' | C5' | H5' | H5'A | 120.8° | 120.1° |
| H5' | C5' | O5' | HO5' | 60.3° | 60.1° |
| H5'A | C5' | O5' | HO5' | 60.3° | 60.0° |
