Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

IKT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1doub1.21Å1.23Å
C1O2sing1.34Å1.24Å
C1C2sing1.51Å1.53Å
O2HO2sing0.97Å0.95Å
C2C3sing1.53Å1.55Å
C2H21sing1.09Å1.12Å
C2H22sing1.09Å1.11Å
C3C4sing1.53Å1.53Å
C3C1'sing1.53Å1.53Å
C3H3sing1.09Å1.11Å
C4C5sing1.53Å1.51Å
C4H41sing1.09Å1.11Å
C4H42sing1.09Å1.11Å
C5C6sing1.53Å1.52Å
C5H51sing1.09Å1.12Å
C5H52sing1.09Å1.12Å
C6C7sing1.53Å1.53Å
C6H61sing1.09Å1.11Å
C6H62sing1.09Å1.11Å
C7C8sing1.53Å1.54Å
C7H71sing1.09Å1.12Å
C7H72sing1.09Å1.12Å
C8C9sing1.51Å1.53Å
C8H81sing1.09Å1.11Å
C8H82sing1.09Å1.11Å
C9O3doub1.21Å1.23Å
C9O4sing1.34Å1.23Å
O4HO4sing0.97Å0.95Å
C1'C2'sing1.53Å1.52Å
C1'N1'sing1.47Å1.44Å
C1'H1'sing1.09Å1.12Å
C2'H2'1sing1.09Å1.12Å
C2'H2'2sing1.09Å1.11Å
C2'H2'3sing1.09Å1.11Å
N1'HN11sing1.01Å1.02Å
N1'HN12sing1.01Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1O2122.5°120.0°
O1C1C2117.5°119.9°
O2C1C2120.0°120.1°
C1O2HO2122.5°120.0°
C1C2C3116.6°109.5°
C1C2H21109.6°109.4°
C1C2H22109.6°109.5°
C3C2H21109.6°109.5°
C3C2H22109.6°109.6°
C2C3C4106.2°109.6°
C2C3C1'112.4°109.4°
C2C3H3110.7°109.4°
H21C2H22100.6°109.5°
C4C3C1'112.2°109.5°
C4C3H3110.9°109.5°
C3C4C5116.8°109.6°
C3C4H41109.5°109.5°
C3C4H42109.5°109.5°
C1'C3H3104.5°109.5°
C3C1'C2'110.9°109.5°
C3C1'N1'108.9°109.5°
C3C1'H1'108.8°109.5°
C5C4H41109.6°109.5°
C5C4H42109.5°109.4°
C4C5C6109.3°109.6°
C4C5H51112.3°109.5°
C4C5H52112.3°109.4°
H41C4H42100.7°109.4°
C6C5H51112.3°109.5°
C6C5H52112.3°109.4°
C5C6C7109.6°109.6°
C5C6H61112.1°109.5°
C5C6H62112.2°109.5°
H51C5H5298.1°109.5°
C7C6H61112.2°109.4°
C7C6H62112.1°109.4°
C6C7C8114.0°109.6°
C6C7H71110.6°109.5°
C6C7H72110.5°109.5°
H61C6H6298.3°109.4°
C8C7H71110.6°109.5°
C8C7H72110.6°109.4°
C7C8C9109.8°109.6°
C7C8H81112.1°109.5°
C7C8H82112.1°109.5°
H71C7H7299.7°109.3°
C9C8H81112.1°109.4°
C9C8H82112.1°109.5°
C8C9O3120.7°119.9°
C8C9O4118.7°120.0°
H81C8H8298.3°109.4°
O3C9O4120.6°120.1°
C9O4HO4118.7°120.0°
C2'C1'N1'109.3°109.5°
C2'C1'H1'108.4°109.5°
C1'C2'H2'1110.9°109.5°
C1'C2'H2'2111.6°109.4°
C1'C2'H2'3111.7°109.5°
N1'C1'H1'110.4°109.4°
C1'N1'HN11108.9°106.7°
C1'N1'HN12112.4°106.7°
H2'1C2'H2'2111.7°109.5°
H2'1C2'H2'3111.7°109.5°
H2'2C2'H2'398.8°109.5°
HN11N1'HN12112.4°106.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1O2C2179.1°179.9°
O1C1O2HO2179.9°0.1°
O1C1C2C30.8°6.5°
O1C1C2H21126.0°126.4°
O1C1C2H22124.5°113.6°
O2C1C2C3179.9°173.7°
O2C1C2H2154.9°53.7°
O2C1C2H2254.6°66.2°
C2C1O2HO21.0°179.9°
C1C2C3H21125.3°119.9°
C1C2C3H22125.3°120.0°
C1C2H21H22115.4°119.9°
C1C2C3C4125.1°66.3°
C1C2C3C1'111.8°173.7°
C1C2C3H34.6°53.8°
C3C2H21H22115.4°120.1°
C2C3C4C1'123.2°120.0°
C2C3C4H3120.3°120.0°
C2C3C1'H3120.1°119.9°
C2C3C4C5178.5°180.0°
C2C3C4H4153.3°59.9°
C2C3C4H4256.2°60.0°
C2C3C1'C2'46.5°55.1°
C2C3C1'N1'73.9°65.0°
C2C3C1'H1'165.7°175.1°
H21C2C3C4109.6°53.6°
H21C2C3C1'13.4°66.4°
H21C2C3H3129.9°173.7°
H22C2C3C40.1°173.7°
H22C2C3C1'122.9°53.7°
H22C2C3H3120.6°66.2°
C4C3C1'H3120.3°120.0°
C3C4C5H41125.2°120.0°
C3C4C5H42125.2°120.0°
C3C4H41H42115.3°120.0°
C3C4C5C6176.2°180.0°
C3C4C5H5150.9°60.0°
C3C4C5H5258.5°60.0°
C4C3C1'C2'73.2°65.0°
C4C3C1'N1'166.5°174.9°
C4C3C1'H1'46.0°55.0°
C1'C3C4C555.4°60.0°
C1'C3C4H4169.9°60.0°
C1'C3C4H42179.4°180.0°
C3C1'C2'N1'120.1°120.1°
C3C1'C2'H1'119.4°120.0°
C3C1'N1'H1'119.4°120.0°
C3C1'C2'H2'1180.0°179.9°
C3C1'C2'H2'254.8°60.0°
C3C1'C2'H2'354.8°59.9°
C3C1'N1'HN11180.0°66.0°
C3C1'N1'HN1254.7°179.7°
H3C3C4C561.1°60.0°
H3C3C4H41173.6°180.0°
H3C3C4H4264.1°60.1°
H3C3C1'C2'166.5°175.0°
H3C3C1'N1'46.2°54.9°
H3C3C1'H1'74.2°65.0°
C5C4H41H42115.3°119.9°
C4C5C6H51125.3°120.1°
C4C5C6H52125.3°120.0°
C4C5H51H52118.2°119.9°
C4C5C6C7178.9°180.0°
C4C5C6H6155.9°60.0°
C4C5C6H6253.6°60.0°
H41C4C5C658.5°60.0°
H41C4C5H51176.2°180.0°
H41C4C5H5266.8°60.0°
H42C4C5C651.0°60.0°
H42C4C5H5174.3°60.1°
H42C4C5H52176.3°180.0°
C6C5H51H52118.2°119.9°
C5C6C7H61125.2°120.1°
C5C6C7H62125.3°120.0°
C5C6H61H62118.1°120.0°
C5C6C7C8177.3°180.0°
C5C6C7H7152.0°59.9°
C5C6C7H7257.4°60.0°
H51C5C6C753.6°59.9°
H51C5C6H61178.8°180.0°
H51C5C6H6271.7°60.1°
H52C5C6C755.9°60.0°
H52C5C6H6169.4°60.0°
H52C5C6H62178.9°180.0°
C7C6H61H62118.1°119.9°
C6C7C8H71125.3°120.1°
C6C7C8H72125.3°120.1°
C6C7H71H72116.4°120.0°
C6C7C8C9177.4°179.9°
C6C7C8H8157.3°60.0°
C6C7C8H8252.2°60.0°
H61C6C7C857.5°59.9°
H61C6C7H71177.2°180.0°
H61C6C7H7267.8°60.1°
H62C6C7C852.0°60.0°
H62C6C7H7173.3°60.1°
H62C6C7H72177.3°180.0°
C8C7H71H72116.4°119.9°
C7C8C9H81125.2°120.0°
C7C8C9H82125.3°120.1°
C7C8H81H82118.0°120.0°
C7C8C9O383.0°0.1°
C7C8C9O494.5°179.9°
H71C7C8C952.2°59.9°
H71C7C8H81177.4°179.9°
H71C7C8H8273.1°60.1°
H72C7C8C957.3°59.9°
H72C7C8H8168.0°60.1°
H72C7C8H82177.5°180.0°
C9C8H81H82118.0°119.9°
C8C9O3O4177.4°179.9°
C8C9O4HO4179.9°180.0°
H81C8C9O342.3°120.1°
H81C8C9O4140.3°60.0°
H82C8C9O3151.8°120.0°
H82C8C9O430.8°59.9°
O3C9O4HO42.5°0.1°
C2'C1'N1'H1'119.2°120.0°
C1'C2'H2'1H2'2125.2°120.0°
C1'C2'H2'1H2'3125.3°120.0°
C1'C2'H2'2H2'3117.6°119.9°
C2'C1'N1'HN1158.7°54.1°
C2'C1'N1'HN1266.6°59.7°
N1'C1'C2'H2'159.9°60.0°
N1'C1'C2'H2'265.3°60.0°
N1'C1'C2'H2'3174.9°180.0°
C1'N1'HN11HN12125.3°113.8°
H1'C1'C2'H2'160.6°60.0°
H1'C1'C2'H2'2174.2°180.0°
H1'C1'C2'H2'364.7°60.1°
H1'C1'N1'HN1160.5°174.1°
H1'C1'N1'HN12174.2°60.3°
H2'1C2'H2'2H2'3117.6°120.1°

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon