Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

IJI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C10sing1.51Å1.49Å
N1C3doub1.32Å1.38Å
N1C4sing1.34Å1.30Å
C3C2sing1.42Å1.46Å
C10O2doub1.21Å1.22Å
C10N5sing1.35Å1.33Å
C5C4sing1.51Å1.53Å
C5N5sing1.47Å1.45Å
C5C6sing1.53Å1.54Å
C4O1doub1.21Å1.24Å
C2C1doub1.34Å1.32Å
C6C7sing1.53Å1.53Å
C7C8sing1.53Å1.53Å
C8N2sing1.46Å1.47Å
N2C9sing1.37Å1.34Å
N4C9doub1.30Å1.33Å
C9N3sing1.37Å1.33Å
C5H1sing1.09Å1.10Å
C6H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
C11H4sing1.09Å1.10Å
C11H5sing1.09Å1.10Å
C11H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C8H10sing1.09Å1.10Å
N2H12sing0.97Å1.00Å
C3H13sing1.08Å1.08Å
N3H15sing0.97Å1.00Å
N3H16sing0.97Å1.00Å
C1H17sing1.08Å1.08Å
C1H18sing1.08Å1.08Å
C2H19sing1.08Å1.08Å
N4H20sing0.97Å1.00Å
N5H21sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C11C10O2121.9°120.0°
C11C10N5117.6°120.0°
C10C11H4109.5°109.4°
C10C11H5109.5°109.4°
C10C11H6109.4°109.4°
C3N1C4127.9°120.0°
N1C3C2125.9°120.0°
N1C3H13117.0°120.0°
N1C4C5115.8°120.0°
N1C4O1122.8°120.0°
C3C2C1117.1°120.0°
C2C3H13117.1°120.0°
C3C2H19121.4°120.0°
O2C10N5120.5°120.0°
C10N5C5121.9°120.0°
C10N5H21119.0°120.0°
C4C5N5106.1°109.5°
C4C5C6119.5°109.5°
C5C4O1120.7°120.0°
C4C5H1107.6°109.5°
N5C5C6107.0°109.4°
N5C5H1108.7°109.5°
C5N5H21119.1°120.0°
C5C6C7113.3°109.5°
C6C5H1107.5°109.5°
C5C6H2108.5°109.5°
C5C6H3108.5°109.4°
C2C1H17120.0°120.0°
C2C1H18120.0°120.0°
C1C2H19121.4°120.0°
C6C7C8118.3°109.5°
C7C6H2108.5°109.5°
C7C6H3108.5°109.5°
C6C7H7107.2°109.5°
C6C7H8107.2°109.5°
C7C8N2119.7°109.5°
C8C7H7107.2°109.4°
C8C7H8107.3°109.5°
C7C8H9106.8°109.4°
C7C8H10106.8°109.5°
C8N2C9127.9°120.0°
N2C8H9106.9°109.5°
N2C8H10106.9°109.5°
C8N2H12116.1°120.0°
N2C9N4121.6°120.0°
N2C9N3118.3°120.0°
C9N2H12116.1°120.0°
N4C9N3119.9°120.0°
C9N4H20112.0°120.1°
C9N3H15120.0°120.0°
C9N3H16120.0°120.0°
H2C6H3109.5°109.5°
H4C11H5109.5°109.5°
H4C11H6109.5°109.5°
H5C11H6109.5°109.5°
H7C7H8109.5°109.5°
H9C8H10109.5°109.5°
H15N3H16120.0°120.0°
H17C1H18120.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C11C10O2N5176.1°179.9°
C11C10N5C550.8°180.0°
C10C11H4H5120.0°119.9°
C10C11H4H6120.0°120.0°
C10C11H5H6120.0°119.9°
C11C10N5H21129.2°0.1°
N1C3C2H13180.0°180.0°
C3N1C4C5143.7°127.2°
C3N1C4O126.5°53.1°
N1C3C2C1139.8°174.7°
N1C3C2H1940.2°5.3°
C4N1C3C249.2°6.0°
N1C4C5O1170.4°179.7°
N1C4C5N586.3°160.3°
N1C4C5C6152.9°79.7°
N1C4C5H130.0°40.3°
C4N1C3H13130.8°174.0°
C3C2C1H19180.0°180.0°
C3C2C1H170.0°180.0°
C3C2C1H18180.0°0.0°
O2C10N5C5125.5°0.0°
O2C10C11H40.0°0.1°
O2C10C11H5120.0°120.1°
O2C10C11H6120.0°120.0°
O2C10N5H2154.5°180.0°
C10N5C5C4118.6°60.0°
C10N5C5H21180.0°179.9°
C10N5C5C6112.8°60.0°
C10N5C5H13.1°179.9°
N5C10C11H4176.2°180.0°
N5C10C11H556.2°60.0°
N5C10C11H663.8°59.9°
C4C5N5C6128.6°120.0°
C4C5N5H1115.5°120.1°
C4C5C6H1122.9°120.1°
C4C5C6C773.7°175.0°
C4C5C6H246.9°64.9°
C4C5C6H3165.8°55.0°
C4C5N5H2161.4°120.1°
N5C5C6H1116.7°120.0°
N5C5C4O184.1°20.0°
N5C5C6C746.7°65.0°
N5C5C6H2167.3°55.0°
N5C5C6H373.8°175.0°
C6C5C4O136.7°99.9°
C5C6C7H2120.5°120.0°
C5C6C7H3120.6°120.0°
C5C6C7C880.6°180.0°
C5C6H2H3118.3°119.9°
C5C6C7H740.6°60.0°
C5C6C7H8158.1°60.0°
C6C5N5H2167.2°120.0°
O1C4C5H1159.6°140.0°
C1C2C3H1340.2°5.3°
C2C1H17H18180.0°180.0°
C6C7C8H7121.2°120.0°
C6C7C8H8121.2°120.0°
C6C7C8N2123.0°180.0°
C7C6C5H1163.4°54.9°
C7C6H2H3118.3°120.0°
C6C7H7H8116.0°120.1°
C6C7C8H9115.5°60.0°
C6C7C8H101.6°60.0°
C7C8N2H9121.4°120.0°
C7C8N2H10121.4°120.0°
C7C8N2C934.0°180.0°
C8C7C6H2158.8°60.0°
C8C7C6H340.0°60.0°
C8C7H7H8116.1°120.0°
C7C8H9H10115.4°120.0°
C7C8N2H12146.0°0.0°
C8N2C9H12180.0°179.9°
C8N2C9N461.9°0.1°
C8N2C9N3123.0°180.0°
N2C8C7H71.8°60.0°
N2C8C7H8115.7°60.0°
N2C8H9H10115.4°120.1°
N2C9N4N3175.1°179.9°
C9N2C8H987.4°60.1°
C9N2C8H10155.4°60.0°
N2C9N3H15175.2°0.0°
N2C9N3H164.8°179.9°
N2C9N4H20175.1°180.0°
N4C9N2H12118.2°180.0°
N4C9N3H150.0°180.0°
N4C9N3H16180.0°0.0°
N3C9N2H1257.0°0.0°
C9N3H15H16180.0°180.0°
N3C9N4H200.0°0.1°
H1C5C6H276.1°175.0°
H1C5C6H342.8°65.1°
H1C5N5H21176.9°0.0°
H2C6C7H779.9°180.0°
H2C6C7H837.6°60.0°
H3C6C7H7161.2°59.9°
H3C6C7H881.3°NaN°
H4C11H5H6120.0°120.1°
H7C7C8H9123.2°180.0°
H7C7C8H10119.7°60.0°
H8C7C8H95.7°60.0°
H8C7C8H10122.8°180.0°
H9C8N2H1292.6°120.0°
H10C8N2H1224.6°120.0°
H13C3C2H19139.8°174.7°
H17C1C2H19180.0°0.0°
H18C1C2H190.0°180.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon