IJB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C5 | sing | 1.40Å | 1.40Å | |
C5 | C4 | doub | 1.39Å | 1.40Å | Aromatic |
C5 | C6 | sing | 1.39Å | 1.41Å | Aromatic |
C4 | C3 | sing | 1.39Å | 1.39Å | Aromatic |
C6 | C7 | doub | 1.38Å | 1.39Å | Aromatic |
C3 | N | sing | 1.39Å | 1.39Å | |
C3 | C2 | doub | 1.40Å | 1.41Å | Aromatic |
N | C | sing | 1.34Å | 1.35Å | |
C7 | C2 | sing | 1.39Å | 1.39Å | Aromatic |
C2 | C1 | sing | 1.48Å | 1.46Å | |
C | C1 | sing | 1.48Å | 1.50Å | |
C | O | doub | 1.22Å | 1.23Å | |
C1 | C8 | doub | 1.36Å | 1.34Å | |
C15 | C14 | doub | 1.37Å | 1.38Å | Aromatic |
C15 | C9 | sing | 1.40Å | 1.39Å | Aromatic |
C8 | C9 | sing | 1.47Å | 1.47Å | |
C14 | C12 | sing | 1.40Å | 1.39Å | Aromatic |
C9 | C10 | doub | 1.40Å | 1.40Å | Aromatic |
O2 | C13 | doub | 1.22Å | 1.23Å | |
C12 | C13 | sing | 1.48Å | 1.49Å | |
C12 | C11 | doub | 1.40Å | 1.39Å | Aromatic |
C10 | C11 | sing | 1.37Å | 1.38Å | Aromatic |
C13 | O1 | sing | 1.35Å | 1.31Å | |
C4 | H1 | sing | 1.08Å | 1.08Å | |
C6 | H2 | sing | 1.08Å | 1.08Å | |
C7 | H3 | sing | 1.08Å | 1.08Å | |
C8 | H4 | sing | 1.08Å | 1.08Å | |
C10 | H5 | sing | 1.08Å | 1.08Å | |
C11 | H6 | sing | 1.08Å | 1.08Å | |
C14 | H7 | sing | 1.08Å | 1.08Å | |
C15 | H8 | sing | 1.08Å | 1.08Å | |
O1 | H9 | sing | 0.97Å | 0.95Å | |
N1 | H10 | sing | 0.97Å | 1.00Å | |
N1 | H11 | sing | 0.97Å | 1.00Å | |
N | H12 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N1 | C5 | C4 | 120.3° | 119.8° |
N1 | C5 | C6 | 120.5° | 119.7° |
C5 | N1 | H10 | 109.5° | 119.9° |
C5 | N1 | H11 | 109.5° | 120.1° |
C4 | C5 | C6 | 119.1° | 120.4° |
C5 | C4 | C3 | 119.2° | 120.1° |
C5 | C4 | H1 | 120.4° | 120.0° |
C5 | C6 | C7 | 121.3° | 120.1° |
C5 | C6 | H2 | 119.3° | 120.0° |
C4 | C3 | N | 128.6° | 131.6° |
C4 | C3 | C2 | 121.8° | 119.1° |
C3 | C4 | H1 | 120.4° | 119.9° |
C6 | C7 | C2 | 120.2° | 119.8° |
C7 | C6 | H2 | 119.4° | 120.0° |
C6 | C7 | H3 | 119.9° | 120.2° |
N | C3 | C2 | 109.5° | 109.3° |
C3 | N | C | 111.1° | 111.5° |
C3 | N | H12 | 124.5° | 124.3° |
C3 | C2 | C7 | 118.4° | 120.5° |
C3 | C2 | C1 | 106.9° | 106.4° |
N | C | C1 | 107.2° | 107.9° |
N | C | O | 125.5° | 126.1° |
C | N | H12 | 124.4° | 124.2° |
C7 | C2 | C1 | 134.7° | 133.1° |
C2 | C7 | H3 | 119.9° | 120.1° |
C2 | C1 | C | 105.3° | 105.0° |
C2 | C1 | C8 | 135.9° | 127.5° |
C1 | C | O | 127.2° | 126.0° |
C | C1 | C8 | 118.8° | 127.5° |
C1 | C8 | C9 | 130.0° | 120.0° |
C1 | C8 | H4 | 115.0° | 120.0° |
C14 | C15 | C9 | 121.3° | 120.0° |
C15 | C14 | C12 | 120.7° | 120.0° |
C15 | C14 | H7 | 119.7° | 120.0° |
C14 | C15 | H8 | 119.4° | 120.0° |
C15 | C9 | C8 | 120.8° | 120.0° |
C15 | C9 | C10 | 117.6° | 119.9° |
C9 | C15 | H8 | 119.3° | 120.0° |
C8 | C9 | C10 | 121.6° | 120.0° |
C9 | C8 | H4 | 115.0° | 120.0° |
C14 | C12 | C13 | 120.6° | 120.0° |
C14 | C12 | C11 | 118.5° | 120.1° |
C12 | C14 | H7 | 119.7° | 119.9° |
C9 | C10 | C11 | 121.2° | 119.9° |
C9 | C10 | H5 | 119.4° | 120.1° |
O2 | C13 | C12 | 121.8° | 120.0° |
O2 | C13 | O1 | 123.6° | 120.0° |
C13 | C12 | C11 | 120.8° | 119.9° |
C12 | C13 | O1 | 114.6° | 120.0° |
C12 | C11 | C10 | 120.7° | 120.0° |
C12 | C11 | H6 | 119.7° | 120.0° |
C11 | C10 | H5 | 119.4° | 120.0° |
C10 | C11 | H6 | 119.6° | 120.0° |
C13 | O1 | H9 | 109.5° | 117.0° |
H10 | N1 | H11 | 109.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C5 | C4 | C6 | 176.9° | 179.9° |
N1 | C5 | C4 | C3 | 175.0° | 179.9° |
N1 | C5 | C6 | C7 | 175.6° | 179.6° |
N1 | C5 | C4 | H1 | 5.0° | 0.0° |
N1 | C5 | C6 | H2 | 4.3° | 0.1° |
C5 | N1 | H10 | H11 | 120.0° | 180.0° |
C5 | C4 | C3 | H1 | 180.0° | 180.0° |
C4 | C5 | C6 | C7 | 1.2° | 0.4° |
C5 | C4 | C3 | N | 176.1° | 180.0° |
C5 | C4 | C3 | C2 | 1.3° | 0.3° |
C4 | C5 | C6 | H2 | 178.8° | 180.0° |
C4 | C5 | N1 | H10 | 180.0° | 0.0° |
C4 | C5 | N1 | H11 | 60.0° | 180.0° |
C6 | C5 | C4 | C3 | 1.8° | 0.0° |
C5 | C6 | C7 | H2 | 180.0° | 179.7° |
C5 | C6 | C7 | C2 | 0.0° | 0.4° |
C6 | C5 | C4 | H1 | 178.1° | 180.0° |
C5 | C6 | C7 | H3 | 180.0° | 180.0° |
C6 | C5 | N1 | H10 | 3.2° | 179.9° |
C6 | C5 | N1 | H11 | 123.2° | 0.1° |
C4 | C3 | N | C2 | 177.6° | 179.7° |
C4 | C3 | N | C | 177.4° | 180.0° |
C4 | C3 | C2 | C7 | 0.0° | 0.2° |
C4 | C3 | C2 | C1 | 178.3° | 179.8° |
C4 | C3 | N | H12 | 2.7° | 0.3° |
C6 | C7 | C2 | C3 | 0.7° | 0.2° |
C6 | C7 | C2 | H3 | 180.0° | 179.6° |
C6 | C7 | C2 | C1 | 177.1° | 179.9° |
C3 | N | C | H12 | 180.0° | 179.7° |
N | C3 | C2 | C7 | 177.8° | 180.0° |
N | C3 | C2 | C1 | 0.5° | 0.0° |
C3 | N | C | C1 | 0.9° | 0.5° |
C3 | N | C | O | 177.2° | 180.0° |
N | C3 | C4 | H1 | 3.9° | 0.0° |
C2 | C3 | N | C | 0.3° | 0.3° |
C3 | C2 | C7 | C1 | 177.7° | 179.9° |
C3 | C2 | C1 | C | 0.9° | 0.3° |
C3 | C2 | C1 | C8 | 178.0° | 180.0° |
C2 | C3 | C4 | H1 | 178.7° | 179.7° |
C3 | C2 | C7 | H3 | 179.4° | 179.7° |
C2 | C3 | N | H12 | 179.7° | 180.0° |
N | C | C1 | C2 | 1.1° | 0.4° |
N | C | C1 | O | 178.0° | 179.6° |
N | C | C1 | C8 | 178.1° | 179.8° |
C7 | C2 | C1 | C | 176.9° | 179.8° |
C7 | C2 | C1 | C8 | 4.1° | 0.0° |
C2 | C7 | C6 | H2 | 179.9° | 179.9° |
C2 | C1 | C | C8 | 179.2° | 179.8° |
C2 | C1 | C | O | 176.9° | 180.0° |
C2 | C1 | C8 | C9 | 0.4° | 10.3° |
C1 | C2 | C7 | H3 | 2.9° | 0.3° |
C2 | C1 | C8 | H4 | 179.6° | 169.7° |
C | C1 | C8 | C9 | 179.3° | 169.9° |
C | C1 | C8 | H4 | 0.8° | 10.1° |
C1 | C | N | H12 | 179.1° | 179.8° |
O | C | C1 | C8 | 3.9° | 0.2° |
O | C | N | H12 | 2.8° | 0.3° |
C1 | C8 | C9 | C15 | 41.7° | 44.4° |
C1 | C8 | C9 | H4 | 180.0° | 180.0° |
C1 | C8 | C9 | C10 | 138.4° | 135.8° |
C14 | C15 | C9 | H8 | 180.0° | 179.5° |
C14 | C15 | C9 | C8 | 179.9° | 179.7° |
C15 | C14 | C12 | H7 | 180.0° | 179.7° |
C14 | C15 | C9 | C10 | 0.1° | 0.5° |
C15 | C14 | C12 | C13 | 176.5° | 179.7° |
C15 | C14 | C12 | C11 | 0.5° | 0.3° |
C15 | C9 | C8 | C10 | 179.9° | 179.8° |
C9 | C15 | C14 | C12 | 0.2° | 0.5° |
C15 | C9 | C10 | C11 | 0.0° | 0.2° |
C15 | C9 | C8 | H4 | 138.3° | 135.6° |
C15 | C9 | C10 | H5 | 180.0° | 179.8° |
C9 | C15 | C14 | H7 | 179.8° | 179.8° |
C8 | C9 | C10 | C11 | 179.9° | 180.0° |
C8 | C9 | C10 | H5 | 0.2° | 0.0° |
C8 | C9 | C15 | H8 | 0.1° | 0.2° |
C14 | C12 | C13 | O2 | 4.3° | 179.9° |
C14 | C12 | C13 | C11 | 176.9° | 180.0° |
C14 | C12 | C11 | C10 | 0.6° | 0.0° |
C14 | C12 | C13 | O1 | 175.9° | 0.0° |
C14 | C12 | C11 | H6 | 179.4° | 180.0° |
C12 | C14 | C15 | H8 | 179.8° | 180.0° |
C9 | C10 | C11 | C12 | 0.4° | 0.0° |
C9 | C10 | C11 | H5 | 180.0° | 180.0° |
C10 | C9 | C8 | H4 | 41.5° | 44.2° |
C9 | C10 | C11 | H6 | 179.6° | 180.0° |
C10 | C9 | C15 | H8 | 180.0° | 180.0° |
O2 | C13 | C12 | O1 | 179.8° | 179.9° |
O2 | C13 | C12 | C11 | 178.8° | 0.0° |
O2 | C13 | O1 | H9 | 0.0° | 0.1° |
C13 | C12 | C11 | C10 | 176.4° | 180.0° |
C13 | C12 | C11 | H6 | 3.6° | 0.0° |
C13 | C12 | C14 | H7 | 3.6° | 0.0° |
C12 | C13 | O1 | H9 | 179.8° | 180.0° |
C12 | C11 | C10 | H6 | 180.0° | 180.0° |
C11 | C12 | C13 | O1 | 1.0° | 180.0° |
C12 | C11 | C10 | H5 | 179.6° | 179.9° |
C11 | C12 | C14 | H7 | 179.5° | 180.0° |
H2 | C6 | C7 | H3 | 0.0° | 0.4° |
H5 | C10 | C11 | H6 | 0.4° | 0.0° |
H7 | C14 | C15 | H8 | 0.2° | 0.3° |