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SummaryGeometryRelated PDB entries

IDN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02sing1.39Å1.47ÅAromatic
C01N06doub1.33Å1.39ÅAromatic
C01N19sing1.39Å1.39Å
C02C03doub1.37Å1.45ÅAromatic
C02C25sing1.51Å1.54Å
C03C04sing1.41Å1.44ÅAromatic
C03H03sing1.08Å1.10Å
C04C05doub1.40Å1.46ÅAromatic
C04C07sing1.47Å1.48Å
C05N06sing1.32Å1.41ÅAromatic
C05H05sing1.08Å1.10Å
C07C08doub1.35Å1.39Å
C07H07sing1.08Å1.10Å
C08C09sing1.46Å1.52Å
C08H08sing1.08Å1.10Å
C09O10doub1.22Å1.24Å
C09N11sing1.35Å1.43Å
N11C12sing1.46Å1.47Å
N11C13sing1.47Å1.49Å
C12H121sing1.09Å1.12Å
C12H122sing1.09Å1.11Å
C12H123sing1.09Å1.11Å
C13C14sing1.51Å1.51Å
C13H131sing1.09Å1.12Å
C13H132sing1.09Å1.12Å
C14C15doub1.34Å1.41ÅAromatic
C14C18sing1.46Å1.45ÅAromatic
C15N16sing1.37Å1.37ÅAromatic
C15H15sing1.08Å1.10Å
N16C17sing1.38Å1.42ÅAromatic
N16C20sing1.46Å1.49Å
C17C18sing1.41Å1.47ÅAromatic
C17C23doub1.39Å1.44ÅAromatic
C18C24doub1.40Å1.44ÅAromatic
N19C27sing1.34Å1.40Å
N19H19sing0.97Å1.02Å
C20H201sing1.09Å1.12Å
C20H202sing1.09Å1.12Å
C20H203sing1.09Å1.11Å
C21C22doub1.39Å1.45ÅAromatic
C21C24sing1.37Å1.45ÅAromatic
C21H21sing1.08Å1.10Å
C22C23sing1.38Å1.45ÅAromatic
C22H22sing1.08Å1.10Å
C23H23sing1.08Å1.10Å
C24H24sing1.08Å1.10Å
C25C26sing1.53Å1.57Å
C25H251sing1.09Å1.12Å
C25H252sing1.09Å1.12Å
C26C27sing1.51Å1.57Å
C26H261sing1.09Å1.12Å
C26H262sing1.09Å1.12Å
C27O28doub1.21Å1.23Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C02C01N06122.2°120.6°
C02C01N19119.9°119.6°
C01C02C03117.7°119.7°
C01C02C25119.3°120.1°
N06C01N19117.9°119.7°
C01N06C05119.1°121.8°
C01N19C27126.3°120.7°
C01N19H19116.6°119.7°
C03C02C25123.0°120.2°
C02C03C04121.1°118.5°
C02C03H03119.6°120.8°
C02C25C26113.5°109.5°
C02C25H251110.8°109.5°
C02C25H252110.7°109.5°
C04C03H03119.3°120.8°
C03C04C05117.2°118.8°
C03C04C07118.9°120.6°
C05C04C07123.9°120.6°
C04C05N06122.8°120.6°
C04C05H05120.5°119.7°
C04C07C08126.7°120.0°
C04C07H07120.1°120.0°
N06C05H05116.8°119.7°
C08C07H07113.1°120.0°
C07C08C09119.4°120.0°
C07C08H08116.0°120.0°
C09C08H08124.6°120.0°
C08C09O10113.8°120.0°
C08C09N11122.2°120.0°
O10C09N11124.0°120.0°
C09N11C12117.0°120.0°
C09N11C13126.1°120.0°
C12N11C13116.8°120.0°
N11C12H121117.0°109.5°
N11C12H122109.5°109.5°
N11C12H123109.4°109.4°
N11C13C14110.3°109.5°
N11C13H131112.0°109.4°
N11C13H132112.0°109.5°
H121C12H122109.4°109.5°
H121C12H123109.5°109.4°
H122C12H123100.7°109.4°
C14C13H131111.9°109.5°
C14C13H132111.9°109.5°
C13C14C15125.5°126.5°
C13C14C18127.3°126.5°
H131C13H13298.5°109.5°
C15C14C18107.2°107.0°
C14C15N16110.8°109.9°
C14C15H15125.6°125.0°
C14C18C17106.2°106.0°
C14C18C24133.3°134.1°
N16C15H15123.6°125.0°
C15N16C17108.8°109.9°
C15N16C20126.6°125.1°
C17N16C20124.6°125.1°
N16C17C18106.9°107.2°
N16C17C23134.1°133.5°
N16C20H201126.6°109.5°
N16C20H202106.2°109.5°
N16C20H203106.2°109.5°
C18C17C23119.0°119.3°
C17C18C24120.5°119.9°
C17C23C22120.6°119.8°
C17C23H23119.4°120.1°
C18C24C21119.9°119.8°
C18C24H24119.5°120.1°
C27N19H19117.1°119.6°
N19C27C26116.8°120.9°
N19C27O28122.5°119.6°
H201C20H202106.2°109.5°
H201C20H203106.2°109.5°
H202C20H203103.3°109.5°
C22C21C24120.3°120.5°
C22C21H21119.7°119.7°
C21C22C23119.8°120.6°
C21C22H22119.9°119.7°
C24C21H21120.1°119.7°
C21C24H24120.6°120.1°
C23C22H22120.3°119.7°
C22C23H23120.0°120.1°
C26C25H251110.7°109.4°
C26C25H252110.7°109.5°
C25C26C27113.5°109.8°
C25C26H261110.8°109.5°
C25C26H262110.7°109.5°
H251C25H25299.6°109.5°
C27C26H261110.8°109.4°
C27C26H262110.8°109.4°
C26C27O28120.6°119.6°
H261C26H26299.5°109.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C02C01N06N19179.5°180.0°
C01C02C03C25179.7°179.7°
C01C02C03C040.2°0.5°
C01C02C03H03179.9°179.7°
C02C01N06C050.3°0.1°
C02C01N19C2711.9°18.6°
C02C01N19H19168.1°161.5°
C01C02C25C2624.2°33.9°
C01C02C25H251101.1°153.8°
C01C02C25H252149.4°86.2°
N06C01C02C030.3°0.3°
N06C01C02C25180.0°180.0°
C01N06C05C040.1°0.1°
C01N06C05H05179.9°180.0°
N06C01N19C27168.6°161.4°
N06C01N19H1911.4°18.5°
N19C01C02C03179.7°179.7°
N19C01C02C250.6°0.0°
N19C01N06C05179.8°179.9°
C01N19C27H19180.0°179.9°
C01N19C27C263.9°0.7°
C01N19C27O28179.0°179.3°
C02C03C04H03179.9°179.8°
C02C03C04C050.5°0.5°
C02C03C04C07179.3°179.8°
C03C02C25C26155.5°146.4°
C03C02C25H25179.2°26.5°
C03C02C25H25230.3°93.6°
C25C02C03C04179.5°179.8°
C25C02C03H030.4°0.0°
C02C25C26H251125.3°119.9°
C02C25C26H252125.3°120.1°
C02C25H251H252116.6°120.1°
C02C25C26C2737.6°48.3°
C02C25C26H261162.9°71.8°
C02C25C26H26287.7°168.4°
C03C04C05C07178.6°179.7°
C03C04C05N060.5°0.3°
C03C04C05H05179.5°179.8°
C03C04C07C0850.8°179.7°
C03C04C07H07129.1°0.3°
H03C03C04C05179.5°179.7°
H03C03C04C070.8°0.0°
C04C05N06H05180.0°179.9°
C05C04C07C08130.5°0.1°
C05C04C07H0749.5°179.9°
C07C04C05N06179.2°180.0°
C07C04C05H050.8°0.1°
C04C07C08H07180.0°180.0°
C04C07C08C09177.4°180.0°
C04C07C08H082.5°0.1°
C07C08C09H08180.0°179.9°
C07C08C09O1064.8°5.1°
C07C08C09N11114.7°174.8°
H07C07C08C092.5°0.0°
H07C07C08H08177.5°179.9°
C08C09O10N11179.4°179.9°
C08C09N11C12178.9°174.6°
C08C09N11C130.5°5.4°
H08C08C09O10115.3°174.8°
H08C08C09N1165.3°5.3°
O10C09N11C120.5°5.5°
O10C09N11C13179.8°174.6°
C09N11C12C13179.4°180.0°
C09N11C12H121180.0°5.1°
C09N11C12H12254.8°115.0°
C09N11C12H12354.8°125.1°
C09N11C13C14100.9°90.0°
C09N11C13H131133.8°30.0°
C09N11C13H13224.3°150.0°
N11C12H121H122125.2°120.1°
N11C12H121H123125.2°120.0°
N11C12H122H123115.2°119.9°
C12N11C13C1478.4°90.0°
C12N11C13H13146.9°150.0°
C12N11C13H132156.4°30.0°
C13N11C12H1210.6°175.0°
C13N11C12H122124.6°64.9°
C13N11C12H123125.8°55.0°
N11C13C14H131125.3°119.9°
N11C13C14H132125.3°120.0°
N11C13H131H132117.9°120.0°
N11C13C14C1591.7°0.0°
N11C13C14C1887.9°179.7°
H121C12H122H123115.3°120.0°
C14C13H131H132117.7°120.1°
C13C14C15C18179.6°179.8°
C13C14C15N16179.4°180.0°
C13C14C15H150.6°0.0°
C13C14C18C17179.5°179.8°
C13C14C18C240.3°0.7°
H131C13C14C15143.0°120.0°
H131C13C14C1837.4°59.8°
H132C13C14C1533.6°119.9°
H132C13C14C18146.8°60.3°
C14C15N16H15179.9°180.0°
C14C15N16C170.2°0.1°
C14C15N16C20179.7°180.0°
C15C14C18C170.1°0.4°
C15C14C18C24179.9°179.5°
C18C14C15N160.2°0.2°
C18C14C15H15179.7°179.8°
C14C18C17N160.0°0.4°
C14C18C17C24179.8°179.3°
C14C18C17C23179.9°179.9°
C14C18C24C21179.9°179.6°
C14C18C24H240.2°0.7°
C15N16C17C20179.9°180.0°
C15N16C17C180.1°0.3°
C15N16C17C23180.0°180.0°
C15N16C20H201180.0°90.0°
C15N16C20H20254.8°150.0°
C15N16C20H20354.7°30.0°
H15C15N16C17179.7°180.0°
H15C15N16C200.4°0.0°
N16C17C18C23179.9°179.7°
N16C17C18C24179.8°179.7°
C17N16C20H2010.2°90.0°
C17N16C20H202125.4°29.9°
C17N16C20H203125.1°149.9°
N16C17C23C22179.9°179.9°
N16C17C23H230.1°0.1°
C20N16C17C18179.7°179.7°
C20N16C17C230.1°0.1°
N16C20H201H202125.2°120.0°
N16C20H201H203125.3°120.0°
N16C20H202H203111.5°120.0°
C17C18C24C210.1°0.6°
C18C17C23C220.1°0.3°
C18C17C23H23179.9°179.7°
C17C18C24H24179.9°179.7°
C23C17C18C240.1°0.6°
C17C23C22C210.1°0.0°
C17C23C22H23180.0°180.0°
C17C23C22H22179.8°180.0°
C18C24C21C220.1°0.3°
C18C24C21H24179.9°179.7°
C18C24C21H21179.9°179.6°
N19C27C26C2528.9°35.1°
N19C27C26O28177.1°180.0°
N19C27C26H261154.2°85.1°
N19C27C26H26296.4°155.2°
H19N19C27C26176.1°179.2°
H19N19C27O281.0°0.8°
H201C20H202H203111.6°120.0°
C22C21C24H21180.0°179.9°
C21C22C23H22180.0°179.9°
C21C22C23H23179.9°180.0°
C22C21C24H24180.0°180.0°
C24C21C22C230.1°0.0°
C24C21C22H22179.9°180.0°
H21C21C22C23180.0°180.0°
H21C21C22H220.1°0.1°
H21C21C24H240.0°0.1°
H22C22C23H230.2°0.0°
C26C25H251H252116.5°120.0°
C25C26C27H261125.3°120.2°
C25C26C27H262125.3°120.1°
C25C26H261H262116.6°119.9°
C25C26C27O28154.0°144.9°
H251C25C26C2787.7°168.3°
H251C25C26H26137.6°48.2°
H251C25C26H262147.0°71.7°
H252C25C26C27162.9°71.7°
H252C25C26H26171.8°168.2°
H252C25C26H26237.6°48.4°
C27C26H261H262116.6°119.7°
H261C26C27O2828.7°94.9°
H262C26C27O2880.7°24.8°

225946

PDB entries from 2024-10-09

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