IC0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C5 | C4 | sing | 1.53Å | 1.51Å | |
C4 | C3 | sing | 1.53Å | 1.53Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | CA | sing | 1.51Å | 1.52Å | |
C3 | CA | sing | 1.53Å | 1.54Å | |
CA | N | sing | 1.47Å | 1.46Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H | sing | 1.01Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
C5 | C6 | sing | 1.51Å | 44.08Å | |
C6 | C7 | doub | 1.31Å | 0.00Å | |
C3 | H1 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C4 | H5 | sing | 1.09Å | 1.10Å | |
C5 | H6 | sing | 1.09Å | 1.10Å | |
C5 | H7 | sing | 1.09Å | 1.10Å | |
C6 | H8 | sing | 1.08Å | 0.00Å | |
C7 | H9 | sing | 1.08Å | 0.00Å | |
C7 | H10 | sing | 1.08Å | 0.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C5 | C4 | C3 | 111.2° | 109.5° |
C4 | C5 | C6 | 52.4° | 109.4° |
C5 | C4 | H4 | 109.1° | 109.5° |
C5 | C4 | H5 | 109.0° | 109.5° |
C4 | C5 | H6 | 121.2° | 109.5° |
C4 | C5 | H7 | 121.2° | 109.5° |
C4 | C3 | CA | 116.0° | 109.5° |
C4 | C3 | H1 | 107.8° | 109.4° |
C4 | C3 | H3 | 107.8° | 109.4° |
C3 | C4 | H4 | 109.0° | 109.5° |
C3 | C4 | H5 | 109.0° | 109.4° |
O | C | CA | 120.7° | 120.0° |
O | C | OXT | 124.4° | 120.0° |
C | CA | C3 | 109.8° | 109.5° |
C | CA | N | 111.5° | 109.5° |
CA | C | OXT | 114.8° | 120.0° |
C | CA | HA | 107.8° | 109.5° |
C3 | CA | N | 111.3° | 109.5° |
C3 | CA | HA | 107.6° | 109.5° |
CA | C3 | H1 | 107.8° | 109.5° |
CA | C3 | H3 | 107.8° | 109.5° |
N | CA | HA | 108.6° | 109.4° |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H | 109.4° | 111.0° |
C | OXT | HXT | 109.5° | 117.0° |
H2 | N | H | 109.5° | 111.0° |
C5 | C6 | C7 | 90.0° | 119.9° |
C6 | C5 | H6 | 121.2° | 109.5° |
C6 | C5 | H7 | 121.2° | 109.4° |
C5 | C6 | H8 | 90.0° | 120.0° |
C7 | C6 | H8 | 90.0° | 120.0° |
C6 | C7 | H9 | 90.0° | 120.0° |
C6 | C7 | H10 | 90.0° | 120.0° |
H1 | C3 | H3 | 109.4° | 109.5° |
H4 | C4 | H5 | 109.5° | 109.5° |
H6 | C5 | H7 | 109.5° | 109.5° |
H9 | C7 | H10 | 90.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C5 | C4 | C3 | H4 | 120.3° | 120.1° |
C5 | C4 | C3 | H5 | 120.2° | 120.0° |
C5 | C4 | C3 | CA | 81.8° | 180.0° |
C4 | C5 | C6 | H6 | 107.4° | 120.0° |
C4 | C5 | C6 | H7 | 107.4° | 120.0° |
C4 | C5 | C6 | C7 | 90.0° | 125.0° |
C5 | C4 | C3 | H1 | 39.1° | 60.0° |
C5 | C4 | C3 | H3 | 157.2° | 60.0° |
C5 | C4 | H4 | H5 | 119.2° | 120.0° |
C4 | C5 | H6 | H7 | 149.0° | 120.0° |
C4 | C5 | C6 | H8 | 90.0° | 55.0° |
C4 | C3 | CA | C | 55.3° | 175.0° |
C4 | C3 | CA | H1 | 120.9° | 120.0° |
C4 | C3 | CA | H3 | 121.0° | 120.0° |
C4 | C3 | CA | N | 179.3° | 65.0° |
C4 | C3 | CA | HA | 61.7° | 55.0° |
C3 | C4 | C5 | C6 | 56.3° | 180.0° |
C4 | C3 | H1 | H3 | 117.0° | 119.9° |
C3 | C4 | H4 | H5 | 119.2° | 119.9° |
C3 | C4 | C5 | H6 | 163.6° | 60.0° |
C3 | C4 | C5 | H7 | 51.0° | 60.0° |
O | C | CA | OXT | 179.6° | 180.0° |
O | C | CA | C3 | 106.1° | 100.0° |
O | C | CA | N | 130.0° | 20.0° |
O | C | CA | HA | 10.9° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | CA | C3 | N | 124.0° | 120.0° |
C | CA | C3 | HA | 117.1° | 120.0° |
C | CA | N | HA | 118.6° | 120.0° |
C | CA | N | H2 | 180.0° | 60.0° |
C | CA | N | H | 60.0° | 176.1° |
CA | C | OXT | HXT | 179.6° | 180.0° |
C | CA | C3 | H1 | 65.6° | 65.0° |
C | CA | C3 | H3 | 176.3° | 55.0° |
C3 | CA | N | HA | 118.4° | 120.0° |
C3 | CA | C | OXT | 74.3° | 80.0° |
C3 | CA | N | H2 | 57.0° | 60.0° |
C3 | CA | N | H | 177.0° | 63.9° |
CA | C3 | H1 | H3 | 117.0° | 120.0° |
CA | C3 | C4 | H4 | 157.9° | 59.9° |
CA | C3 | C4 | H5 | 38.4° | 60.0° |
N | CA | C | OXT | 49.6° | 160.0° |
CA | N | H2 | H | 120.0° | 123.9° |
N | CA | C3 | H1 | 58.4° | 55.0° |
N | CA | C3 | H3 | 59.7° | 175.0° |
OXT | C | CA | HA | 168.7° | 40.1° |
HA | CA | N | H2 | 61.4° | 180.0° |
HA | CA | N | H | 58.6° | 56.1° |
HA | CA | C3 | H1 | 177.3° | 175.0° |
HA | CA | C3 | H3 | 59.2° | 65.0° |
C5 | C6 | C7 | H8 | 90.0° | 180.0° |
C6 | C5 | C4 | H4 | 176.6° | 60.0° |
C6 | C5 | C4 | H5 | 63.9° | 60.0° |
C6 | C5 | H6 | H7 | 148.9° | 120.0° |
C5 | C6 | C7 | H9 | 90.0° | 0.0° |
C5 | C6 | C7 | H10 | 90.0° | 180.0° |
C7 | C6 | C5 | H6 | 90.0° | 5.0° |
C7 | C6 | C5 | H7 | 90.0° | 115.0° |
C6 | C7 | H9 | H10 | 90.0° | 180.0° |
H1 | C3 | C4 | H4 | 81.1° | 180.0° |
H1 | C3 | C4 | H5 | 159.4° | 60.0° |
H3 | C3 | C4 | H4 | 37.0° | 60.0° |
H3 | C3 | C4 | H5 | 82.5° | 180.0° |
H4 | C4 | C5 | H6 | 76.1° | 180.0° |
H4 | C4 | C5 | H7 | 69.2° | 60.0° |
H5 | C4 | C5 | H6 | 43.4° | 60.0° |
H5 | C4 | C5 | H7 | 171.3° | 180.0° |
H6 | C5 | C6 | H8 | 90.0° | 175.0° |
H7 | C5 | C6 | H8 | 90.0° | 65.0° |
H8 | C6 | C7 | H9 | 90.0° | 180.0° |
H8 | C6 | C7 | H10 | 90.0° | 0.0° |