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IBU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
COA2doub1.21Å1.21Å
CO3sing1.34Å1.43Å
OA1Csing1.35Å1.24Å
OA1CBsing1.45Å1.25Å
CBH2Bsing1.09Å1.10Å
CBH1Bsing1.09Å1.10Å
CGCBsing1.53Å1.53Å
CGCD1sing1.53Å1.53Å
CGCD2sing1.53Å1.53Å
CD1H3D1sing1.09Å1.10Å
CD1H2D1sing1.09Å1.10Å
CD2H3D2sing1.09Å1.10Å
HGCGsing1.09Å1.10Å
H1D1CD1sing1.09Å1.10Å
H1D2CD2sing1.09Å1.10Å
H2D2CD2sing1.09Å1.10Å
O3H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OA2CO3120.3°120.0°
OA2COA1119.3°119.9°
O3COA1120.3°120.0°
CO3H10109.5°117.0°
COA1CB112.0°117.0°
OA1CBH2B109.7°109.4°
OA1CBH1B109.8°109.5°
OA1CBCG108.9°109.4°
H2BCBH1B109.0°109.5°
H2BCBCG109.6°109.5°
H1BCBCG109.8°109.5°
CBCGCD1109.5°109.5°
CBCGCD2109.4°109.5°
CBCGHG109.5°109.5°
CD1CGCD2109.4°109.4°
CGCD1H3D1109.5°109.5°
CGCD1H2D1109.5°109.5°
CD1CGHG109.5°109.5°
CGCD1H1D1109.5°109.5°
CGCD2H3D2109.5°109.5°
CD2CGHG109.6°109.5°
CGCD2H1D2109.5°109.5°
CGCD2H2D2109.4°109.5°
H3D1CD1H2D1109.4°109.5°
H3D1CD1H1D1109.5°109.4°
H2D1CD1H1D1109.5°109.5°
H3D2CD2H1D2109.5°109.4°
H3D2CD2H2D2109.5°109.5°
H1D2CD2H2D2109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OA2CO3OA1180.0°179.7°
OA2COA1CB90.4°0.1°
OA2CO3H100.0°0.0°
O3COA1CB89.6°179.7°
COA1CBH2B60.3°60.0°
COA1CBH1B59.5°60.0°
COA1CBCG179.7°180.0°
OA1CO3H10180.0°179.7°
OA1CBH2BH1B120.3°120.0°
OA1CBH2BCG119.5°119.9°
OA1CBH1BCG119.7°120.0°
OA1CBCGCD1157.1°65.1°
OA1CBCGCD283.0°175.0°
OA1CBCGHG37.0°55.0°
H2BCBH1BCG120.1°120.1°
H2BCBCGCD137.1°175.0°
H2BCBCGCD2157.0°55.1°
H2BCBCGHG82.9°65.0°
H1BCBCGCD182.7°54.9°
H1BCBCGCD237.2°65.0°
H1BCBCGHG157.3°174.9°
CBCGCD1CD2119.9°120.0°
CBCGCD1HG120.0°120.0°
CBCGCD2HG120.0°120.0°
CBCGCD1H3D1135.6°180.0°
CBCGCD1H2D115.7°60.0°
CBCGCD2H3D2136.3°60.1°
CBCGCD1H1D1104.4°60.1°
CBCGCD2H1D2103.7°180.0°
CBCGCD2H2D216.3°60.0°
CD1CGCD2HG120.0°120.0°
CGCD1H3D1H2D1120.0°120.1°
CGCD1H3D1H1D1120.0°119.9°
CGCD1H2D1H1D1120.0°120.0°
CD1CGCD2H3D2103.8°180.0°
CD1CGCD2H1D216.2°60.1°
CD1CGCD2H2D2136.2°60.0°
CD2CGCD1H3D1104.5°60.1°
CD2CGCD1H2D1135.6°60.0°
CGCD2H3D2H1D2120.0°120.0°
CGCD2H3D2H2D2120.0°120.0°
CD2CGCD1H1D115.5°179.9°
CGCD2H1D2H2D2120.0°120.1°
H3D1CD1H2D1H1D1120.0°119.9°
H3D1CD1CGHG15.6°60.0°
H2D1CD1CGHG104.3°180.0°
H3D2CD2CGHG16.2°60.0°
H3D2CD2H1D2H2D2120.0°120.0°
HGCGCD1H1D1135.6°59.9°
HGCGCD2H1D2136.2°59.9°
HGCGCD2H2D2103.8°180.0°

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PDB entries from 2026-02-04

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