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IBR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C'O'doub1.21Å1.21Å
C'C2'sing1.47Å1.38Å
C'H'sing1.08Å1.10Å
C1'C2'doub1.40Å1.37ÅAromatic
C1'C6'sing1.38Å1.41ÅAromatic
C1'C2sing1.51Å1.53Å
C2'C3'sing1.40Å1.40ÅAromatic
C3'C4'doub1.38Å1.40ÅAromatic
C3'H3'sing1.08Å1.10Å
C4'C5'sing1.39Å1.40ÅAromatic
C4'Nsing1.40Å1.41Å
C5'C6'doub1.38Å1.40ÅAromatic
C5'H5'sing1.08Å1.10Å
C6'H6'sing1.08Å1.10Å
NHN1sing0.97Å1.02Å
NHN2sing0.97Å1.02Å
C1C2sing1.51Å1.52Å
C1O11sing1.34Å1.40Å
C1O12doub1.21Å1.26Å
C2H21sing1.09Å1.12Å
C2H22sing1.09Å1.11Å
O11C2Esing1.45Å1.45Å
C1EC2Esing1.53Å1.54Å
C1EBRsing1.96Å1.97Å
C1EHE11sing1.09Å1.12Å
C1EHE12sing1.09Å1.12Å
C2EHE21sing1.09Å1.12Å
C2EHE22sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O'C'C2'119.8°120.0°
O'C'H'113.7°120.1°
C2'C'H'126.4°120.0°
C'C2'C1'117.6°120.1°
C'C2'C3'120.8°120.1°
C2'C1'C6'119.9°119.9°
C2'C1'C2117.4°120.0°
C1'C2'C3'120.6°119.8°
C6'C1'C2122.2°120.0°
C1'C6'C5'119.7°120.3°
C1'C6'H6'120.6°119.9°
C1'C2C1113.7°109.5°
C1'C2H21110.6°109.5°
C1'C2H22110.7°109.5°
C2'C3'C4'119.9°119.7°
C2'C3'H3'120.3°120.1°
C4'C3'H3'119.8°120.1°
C3'C4'C5'119.7°120.0°
C3'C4'N120.1°120.0°
C5'C4'N120.3°120.0°
C4'C5'C6'119.9°120.3°
C4'C5'H5'120.2°119.9°
C4'NHN1120.1°120.0°
C4'NHN2108.4°120.0°
C6'C5'H5'119.9°119.8°
C5'C6'H6'119.7°119.9°
HN1NHN2108.3°119.9°
C2C1O11121.5°120.0°
C2C1O12119.7°120.1°
C1C2H21110.6°109.5°
C1C2H22110.7°109.4°
O11C1O12118.7°119.9°
C1O11C2E116.5°120.0°
H21C2H2299.7°109.5°
O11C2EC1E109.3°109.4°
O11C2EHE21112.3°109.5°
O11C2EHE22112.3°109.5°
C2EC1EBR112.0°109.5°
C2EC1EHE11111.3°109.4°
C2EC1EHE12111.3°109.5°
C1EC2EHE21112.2°109.5°
C1EC2EHE22112.2°109.4°
BRC1EHE11111.3°109.4°
BRC1EHE12111.3°109.5°
HE11C1EHE1299.1°109.5°
HE21C2EHE2298.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O'C'C2'H'180.0°180.0°
O'C'C2'C1'87.3°180.0°
O'C'C2'C3'81.8°0.2°
C'C2'C1'C3'169.1°179.8°
C'C2'C1'C6'176.5°180.0°
C'C2'C1'C212.0°0.0°
C'C2'C3'C4'174.6°179.7°
C'C2'C3'H3'5.4°0.2°
H'C'C2'C1'92.7°0.0°
H'C'C2'C3'98.2°179.8°
C2'C1'C6'C2171.1°180.0°
C1'C2'C3'C4'5.8°0.5°
C1'C2'C3'H3'174.2°180.0°
C2'C1'C6'C5'4.6°0.0°
C2'C1'C6'H6'175.5°180.0°
C2'C1'C2C1144.9°90.0°
C2'C1'C2H2189.9°30.0°
C2'C1'C2H2219.6°150.0°
C6'C1'C2'C3'7.4°0.2°
C1'C6'C5'C4'0.2°0.0°
C1'C6'C5'H6'179.9°180.0°
C1'C6'C5'H5'179.8°179.9°
C6'C1'C2C126.4°90.0°
C6'C1'C2H2198.8°150.0°
C6'C1'C2H22151.7°30.0°
C2C1'C2'C3'178.9°179.8°
C2C1'C6'C5'175.6°180.0°
C2C1'C6'H6'4.4°0.0°
C1'C2C1H21125.2°120.1°
C1'C2C1H22125.3°120.0°
C1'C2C1O1131.3°180.0°
C1'C2C1O12150.5°0.0°
C1'C2H21H22116.5°120.0°
C2'C3'C4'H3'180.0°179.6°
C2'C3'C4'C5'1.3°0.5°
C2'C3'C4'N177.8°179.7°
C3'C4'C5'N179.2°179.8°
C3'C4'C5'C6'1.4°0.3°
C3'C4'C5'H5'178.6°179.9°
C3'C4'NHN1180.0°179.7°
C3'C4'NHN254.8°0.4°
H3'C3'C4'C5'178.6°179.9°
H3'C3'C4'N2.2°0.2°
C4'C5'C6'H5'180.0°179.9°
C4'C5'C6'H6'179.9°180.0°
C5'C4'NHN10.9°0.1°
C5'C4'NHN2126.1°179.8°
NC4'C5'C6'179.5°180.0°
NC4'C5'H5'0.5°0.1°
C4'NHN1HN2125.2°179.9°
H5'C5'C6'H6'0.1°0.1°
C2C1O11O12178.2°180.0°
C1C2H21H22116.6°120.0°
C2C1O11C2E122.0°179.9°
O11C1C2H21156.5°60.0°
O11C1C2H2294.0°60.0°
C1O11C2EC1E145.9°180.0°
C1O11C2EHE2120.7°60.0°
C1O11C2EHE2288.8°60.0°
O12C1C2H2125.2°120.0°
O12C1C2H2284.3°120.0°
O12C1O11C2E59.7°0.0°
O11C2EC1EHE21125.3°120.0°
O11C2EC1EHE22125.3°120.0°
O11C2EC1EBR102.0°60.0°
O11C2EC1EHE1123.3°180.0°
O11C2EC1EHE12132.7°60.0°
O11C2EHE21HE22118.2°120.0°
C2EC1EBRHE11125.3°120.0°
C2EC1EBRHE12125.3°120.0°
C2EC1EHE11HE12117.1°120.0°
C1EC2EHE21HE22118.1°120.0°
BRC1EHE11HE12117.1°120.0°
BRC1EC2EHE21132.7°60.0°
BRC1EC2EHE2223.3°180.0°
HE11C1EC2EHE21102.0°60.0°
HE11C1EC2EHE22148.6°60.0°
HE12C1EC2EHE217.4°180.0°
HE12C1EC2EHE22102.0°60.0°

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PDB entries from 2025-08-27

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