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I8Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OSdoub1.42Å1.44Å
CSsing1.76Å1.67Å
CC1sing1.39Å1.42ÅAromatic
NC1sing1.39Å1.38Å
C1C2doub1.40Å1.41ÅAromatic
O1C2sing1.36Å1.37Å
C3Cdoub1.38Å1.39ÅAromatic
C4C3sing1.39Å1.39ÅAromatic
C4C5doub1.41Å1.41ÅAromatic
C2C5sing1.39Å1.43ÅAromatic
C5C6sing1.48Å1.48Å
C6C7sing1.48Å1.48Å
C7C8doub1.39Å1.39ÅAromatic
C8C9sing1.38Å1.38ÅAromatic
C9C10doub1.38Å1.37ÅAromatic
C10C11sing1.38Å1.38ÅAromatic
C11C12doub1.39Å1.40ÅAromatic
C7C12sing1.41Å1.40ÅAromatic
C12C13sing1.48Å1.48Å
C13C4sing1.48Å1.48Å
O2C13doub1.22Å1.23Å
O3C6doub1.22Å1.22Å
O4Ssing1.52Å1.40Å
SO5doub1.42Å1.44Å
C3H3sing1.08Å1.08Å
C9H5sing1.08Å1.08Å
C10H6sing1.08Å1.08Å
C11H7sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
O1H2sing0.97Å0.95Å
NHsing0.97Å1.00Å
NH1sing0.97Å1.00Å
O4H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OSC106.7°106.4°
OSO4111.8°106.4°
OSO5114.2°123.2°
SCC1121.3°119.7°
SCC3116.7°119.7°
CSO4103.8°107.2°
CSO5106.4°106.4°
CC1N122.5°119.9°
CC1C2117.3°120.2°
C1CC3121.9°120.6°
NC1C2120.1°119.9°
C1NH109.5°119.9°
C1NH1109.5°120.0°
C1C2O1116.3°120.2°
C1C2C5120.8°119.6°
O1C2C5122.8°120.2°
C2O1H2109.5°114.0°
CC3C4120.8°120.1°
CC3H3119.6°120.0°
C3C4C5119.7°119.9°
C3C4C13118.9°120.5°
C4C3H3119.6°120.0°
C4C5C2119.3°119.7°
C4C5C6120.0°119.7°
C5C4C13121.4°119.6°
C2C5C6120.7°120.6°
C5C6C7118.7°119.2°
C5C6O3120.9°120.4°
C6C7C8119.5°120.6°
C6C7C12121.0°119.6°
C7C6O3120.3°120.4°
C7C8C9120.1°119.8°
C8C7C12119.5°119.7°
C7C8H4119.9°120.1°
C8C9C10120.4°120.4°
C8C9H5119.8°119.8°
C9C8H4120.0°120.1°
C9C10C11120.4°120.5°
C10C9H5119.8°119.8°
C9C10H6119.8°119.8°
C10C11C12120.0°119.8°
C11C10H6119.8°119.7°
C10C11H7120.0°120.1°
C11C12C7119.5°119.7°
C11C12C13119.6°120.6°
C12C11H7120.0°120.0°
C7C12C13120.9°119.7°
C12C13C4118.0°119.2°
C12C13O2121.0°120.4°
C4C13O2121.0°120.4°
O4SO5113.0°106.4°
SO4H8109.5°114.0°
HNH1109.5°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OSCO4118.3°113.6°
OSCO5122.3°132.9°
OSCC1147.9°36.5°
OSCC327.8°143.6°
OSO4O5130.5°133.0°
OSO4H80.0°66.5°
SCC1C3175.5°180.0°
SCC1N11.9°0.3°
SCC1C2170.8°180.0°
SCC3C4171.5°180.0°
CSO4O5114.9°113.5°
SCC3H38.5°0.0°
CSO4H8114.7°180.0°
CC1NC2177.1°179.7°
CC1C2O1179.9°180.0°
C1CC3C44.2°0.0°
CC1C2C51.2°0.0°
C1CSO493.8°150.0°
C1CSO525.7°96.5°
C1CC3H3175.8°179.9°
CC1NH180.0°179.7°
CC1NH160.0°0.3°
NC1C2O12.6°0.4°
NC1CC3172.5°179.7°
NC1C2C5176.1°179.7°
C1NHH1120.0°179.9°
C1C2O1C5178.7°180.0°
C2C1CC34.7°0.0°
C1C2C5C42.7°0.1°
C1C2C5C6176.8°180.0°
C1C2O1H2176.5°90.0°
C2C1NH2.9°0.1°
C2C1NH1122.9°180.0°
O1C2C5C4176.0°179.9°
O1C2C5C64.6°0.0°
CC3C4H3180.0°180.0°
CC3C4C50.1°0.0°
CC3C4C13178.4°180.0°
C3CSO490.5°30.0°
C3CSO5150.1°83.5°
C3C4C5C13178.4°180.0°
C3C4C5C23.3°0.1°
C3C4C5C6176.2°180.0°
C3C4C13C12176.1°166.2°
C3C4C13O24.1°13.8°
C4C5C2C6179.5°180.0°
C4C5C6C71.0°13.7°
C5C4C13C122.3°13.8°
C5C4C13O2177.5°166.3°
C4C5C6O3177.5°166.3°
C5C4C3H3179.9°180.0°
C2C5C6C7179.5°166.3°
C2C5C4C13178.3°179.9°
C2C5C6O31.9°13.7°
C5C2O1H24.8°90.0°
C5C6C7O3178.6°180.0°
C5C6C7C8177.7°166.2°
C5C6C7C120.0°13.7°
C6C5C4C132.2°0.0°
C6C7C8C12177.7°180.0°
C6C7C8C9176.3°179.9°
C6C7C12C11177.1°180.0°
C6C7C12C130.1°0.0°
C6C7C8H43.7°0.0°
C7C8C9H4180.0°180.0°
C7C8C9C100.8°0.1°
C8C7C12C110.6°0.0°
C8C7C12C13177.8°180.0°
C8C7C6O30.9°13.7°
C7C8C9H5179.2°179.9°
C8C9C10H5180.0°180.0°
C8C9C10C110.6°0.0°
C9C8C7C121.4°0.0°
C8C9C10H6179.4°180.0°
C9C10C11H6180.0°180.0°
C9C10C11C121.4°0.1°
C9C10C11H7178.5°180.0°
C10C9C8H4179.2°180.0°
C10C11C12H7180.0°180.0°
C10C11C12C70.8°0.1°
C10C11C12C13176.4°180.0°
C11C10C9H5179.4°180.0°
C11C12C7C13177.2°179.9°
C11C12C13C4176.0°166.2°
C11C12C13O24.3°13.7°
C12C11C10H6178.5°180.0°
C7C12C13C41.2°13.8°
C7C12C13O2178.5°166.3°
C12C7C6O3178.6°166.3°
C7C12C11H7179.2°179.9°
C12C7C8H4178.6°180.0°
C12C13C4O2179.7°179.9°
C13C12C11H73.6°0.0°
C13C4C3H31.7°0.0°
O5SO4H8130.5°66.5°
H5C9C10H60.6°0.0°
H5C9C8H40.8°0.0°
H6C10C11H71.5°0.0°

222415

PDB entries from 2024-07-10

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