I2M
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
CA | CB | sing | 1.53Å | 1.57Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CB | CG3 | sing | 1.53Å | 1.54Å | |
CB | CG2 | sing | 1.53Å | 1.54Å | |
CB | CG1 | sing | 1.53Å | 1.55Å | |
CG1 | CD1 | sing | 1.53Å | 1.53Å | |
C | O | doub | 1.21Å | 1.24Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CG3 | HG31 | sing | 1.09Å | 1.10Å | |
CG3 | HG32 | sing | 1.09Å | 1.10Å | |
CG3 | HG33 | sing | 1.09Å | 1.10Å | |
CG2 | HG21 | sing | 1.09Å | 1.10Å | |
CG2 | HG22 | sing | 1.09Å | 1.10Å | |
CG2 | HG23 | sing | 1.09Å | 1.10Å | |
CG1 | HG12 | sing | 1.09Å | 1.10Å | |
CG1 | HG13 | sing | 1.09Å | 1.10Å | |
CD1 | HD11 | sing | 1.09Å | 1.10Å | |
CD1 | HD12 | sing | 1.09Å | 1.10Å | |
CD1 | HD13 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N | CA | CB | 110.7° | 109.5° |
N | CA | C | 107.5° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 111.8° | 109.5° |
CB | CA | C | 114.6° | 109.5° |
CA | CB | CG3 | 114.5° | 109.5° |
CA | CB | CG2 | 108.2° | 109.5° |
CA | CB | CG1 | 114.8° | 109.5° |
CB | CA | HA | 104.4° | 109.5° |
CA | C | O | 119.8° | 120.0° |
CA | C | OXT | 120.2° | 120.0° |
C | CA | HA | 107.8° | 109.4° |
CG3 | CB | CG2 | 107.0° | 109.5° |
CG3 | CB | CG1 | 103.0° | 109.5° |
CB | CG3 | HG31 | 109.5° | 109.5° |
CB | CG3 | HG32 | 109.5° | 109.5° |
CB | CG3 | HG33 | 109.5° | 109.4° |
CG2 | CB | CG1 | 108.9° | 109.5° |
CB | CG2 | HG21 | 109.5° | 109.4° |
CB | CG2 | HG22 | 109.4° | 109.4° |
CB | CG2 | HG23 | 109.5° | 109.4° |
CB | CG1 | CD1 | 117.3° | 109.5° |
CB | CG1 | HG12 | 106.9° | 109.5° |
CB | CG1 | HG13 | 105.1° | 109.5° |
CD1 | CG1 | HG12 | 106.9° | 109.5° |
CD1 | CG1 | HG13 | 105.1° | 109.5° |
CG1 | CD1 | HD11 | 109.5° | 109.5° |
CG1 | CD1 | HD12 | 109.4° | 109.5° |
CG1 | CD1 | HD13 | 109.4° | 109.5° |
O | C | OXT | 119.9° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.4° | 111.1° |
HG31 | CG3 | HG32 | 109.5° | 109.5° |
HG31 | CG3 | HG33 | 109.5° | 109.5° |
HG32 | CG3 | HG33 | 109.5° | 109.5° |
HG21 | CG2 | HG22 | 109.5° | 109.5° |
HG21 | CG2 | HG23 | 109.5° | 109.5° |
HG22 | CG2 | HG23 | 109.5° | 109.5° |
HG12 | CG1 | HG13 | 115.8° | 109.4° |
HD11 | CD1 | HD12 | 109.5° | 109.5° |
HD11 | CD1 | HD13 | 109.4° | 109.4° |
HD12 | CD1 | HD13 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N | CA | CB | C | 121.8° | 120.0° |
N | CA | CB | HA | 120.5° | 120.0° |
N | CA | C | HA | 120.7° | 120.0° |
N | CA | CB | CG3 | 81.5° | 60.0° |
N | CA | CB | CG2 | 159.2° | 180.0° |
N | CA | CB | CG1 | 37.4° | 60.0° |
N | CA | C | O | 55.0° | 20.0° |
N | CA | C | OXT | 122.7° | 160.0° |
CA | N | H | H2 | 120.0° | 124.0° |
CB | CA | C | HA | 115.7° | 120.0° |
CA | CB | CG3 | CG2 | 119.9° | 120.0° |
CA | CB | CG3 | CG1 | 125.4° | 120.0° |
CA | CB | CG2 | CG1 | 125.4° | 120.0° |
CA | CB | CG1 | CD1 | 55.6° | 180.0° |
CB | CA | C | O | 68.5° | 99.9° |
CB | CA | C | OXT | 113.8° | 80.0° |
CB | CA | N | H | 69.5° | 60.1° |
CB | CA | N | H2 | 50.5° | 64.0° |
CA | CB | CG3 | HG31 | 114.4° | 60.0° |
CA | CB | CG3 | HG32 | 125.6° | 180.0° |
CA | CB | CG3 | HG33 | 5.6° | 60.0° |
CA | CB | CG2 | HG21 | 62.8° | 60.0° |
CA | CB | CG2 | HG22 | 177.2° | 180.0° |
CA | CB | CG2 | HG23 | 57.2° | 60.0° |
CA | CB | CG1 | HG12 | 64.4° | 59.9° |
CA | CB | CG1 | HG13 | 171.9° | 60.0° |
C | CA | CB | CG3 | 40.3° | 60.0° |
C | CA | CB | CG2 | 79.0° | 60.0° |
C | CA | CB | CG1 | 159.2° | 180.0° |
CA | C | O | OXT | 177.6° | 179.9° |
C | CA | N | H | 56.3° | 60.0° |
C | CA | N | H2 | 176.3° | 176.0° |
CA | C | OXT | HXT | 177.6° | 180.0° |
CG3 | CB | CG2 | CG1 | 110.7° | 120.0° |
CG3 | CB | CG1 | CD1 | 179.2° | 60.0° |
CG3 | CB | CA | HA | 158.0° | 180.0° |
CB | CG3 | HG31 | HG32 | 120.0° | 120.0° |
CB | CG3 | HG31 | HG33 | 120.0° | 120.0° |
CB | CG3 | HG32 | HG33 | 120.0° | 119.9° |
CG3 | CB | CG2 | HG21 | 173.3° | 180.0° |
CG3 | CB | CG2 | HG22 | 53.3° | 60.0° |
CG3 | CB | CG2 | HG23 | 66.7° | 60.0° |
CG3 | CB | CG1 | HG12 | 60.8° | 180.0° |
CG3 | CB | CG1 | HG13 | 62.9° | 60.0° |
CG2 | CB | CG1 | CD1 | 65.8° | 60.0° |
CG2 | CB | CA | HA | 38.7° | 60.0° |
CG2 | CB | CG3 | HG31 | 5.5° | 60.0° |
CG2 | CB | CG3 | HG32 | 114.5° | 60.0° |
CG2 | CB | CG3 | HG33 | 125.5° | 180.0° |
CB | CG2 | HG21 | HG22 | 120.0° | 119.9° |
CB | CG2 | HG21 | HG23 | 120.0° | 120.0° |
CB | CG2 | HG22 | HG23 | 120.0° | 120.0° |
CG2 | CB | CG1 | HG12 | 174.2° | 60.1° |
CG2 | CB | CG1 | HG13 | 50.5° | 180.0° |
CB | CG1 | CD1 | HG12 | 120.0° | 120.0° |
CB | CG1 | CD1 | HG13 | 116.4° | 120.0° |
CG1 | CB | CA | HA | 83.1° | 60.0° |
CG1 | CB | CG3 | HG31 | 120.2° | 179.9° |
CG1 | CB | CG3 | HG32 | 0.2° | 60.0° |
CG1 | CB | CG3 | HG33 | 119.8° | 60.0° |
CG1 | CB | CG2 | HG21 | 62.6° | 60.0° |
CG1 | CB | CG2 | HG22 | 57.4° | 60.0° |
CG1 | CB | CG2 | HG23 | 177.5° | 180.0° |
CB | CG1 | HG12 | HG13 | 116.8° | 120.0° |
CB | CG1 | CD1 | HD11 | 120.6° | 60.0° |
CB | CG1 | CD1 | HD12 | 119.4° | 60.0° |
CB | CG1 | CD1 | HD13 | 0.6° | 180.0° |
CD1 | CG1 | HG12 | HG13 | 116.8° | 120.0° |
CG1 | CD1 | HD11 | HD12 | 120.0° | 120.0° |
CG1 | CD1 | HD11 | HD13 | 120.0° | 120.0° |
CG1 | CD1 | HD12 | HD13 | 120.0° | 120.0° |
O | C | CA | HA | 175.7° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
OXT | C | CA | HA | 1.9° | 40.1° |
H | N | CA | HA | 174.5° | 179.9° |
H2 | N | CA | HA | 65.5° | 56.0° |
HG31 | CG3 | HG32 | HG33 | 120.0° | 120.1° |
HG21 | CG2 | HG22 | HG23 | 120.0° | 120.1° |
HG12 | CG1 | CD1 | HD11 | 0.6° | 180.0° |
HG12 | CG1 | CD1 | HD12 | 120.6° | 60.0° |
HG12 | CG1 | CD1 | HD13 | 119.4° | 60.0° |
HG13 | CG1 | CD1 | HD11 | 123.0° | 60.0° |
HG13 | CG1 | CD1 | HD12 | 3.0° | 179.9° |
HG13 | CG1 | CD1 | HD13 | 117.0° | 59.9° |
HD11 | CD1 | HD12 | HD13 | 120.0° | 120.0° |