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SummaryGeometryRelated PDB entries

HYV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C23C24sing1.41Å1.36ÅAromatic
C23C22doub1.35Å1.38ÅAromatic
C24C25doub1.35Å1.39ÅAromatic
C22N21sing1.37Å1.34ÅAromatic
C25N21sing1.37Å1.33ÅAromatic
N21C20sing1.40Å1.45Å
C20S26sing1.76Å1.61ÅAromatic
C20N19doub1.30Å1.37ÅAromatic
S26C17sing1.76Å1.61ÅAromatic
N19N18sing1.26Å1.50ÅAromatic
C27C28sing1.53Å1.52Å
C27N16sing1.47Å1.50Å
C17N18doub1.30Å1.36ÅAromatic
C17N16sing1.39Å1.45Å
C28C13sing1.53Å1.45Å
N16C15sing1.47Å1.50Å
O29C12doub1.21Å1.17Å
C13C12sing1.51Å1.54Å
C13C14sing1.53Å1.46Å
C15C14sing1.53Å1.54Å
C12N11sing1.35Å1.45Å
N11C10sing1.47Å1.49Å
N11C30sing1.47Å1.52Å
C10C09sing1.53Å1.52Å
C30C31sing1.53Å1.53Å
C07C04sing1.51Å1.55Å
C07C08sing1.53Å1.54Å
C31C08sing1.53Å1.47Å
C09C08sing1.53Å1.48Å
C03C04doub1.38Å1.39ÅAromatic
C03C02sing1.38Å1.38ÅAromatic
C04C05sing1.38Å1.39ÅAromatic
C02C01doub1.38Å1.37ÅAromatic
C05C06doub1.38Å1.39ÅAromatic
C01C06sing1.38Å1.38ÅAromatic
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C15H4sing1.09Å1.10Å
C15H5sing1.09Å1.10Å
C22H6sing1.08Å1.08Å
C24H7sing1.08Å1.08Å
C28H8sing1.09Å1.10Å
C28H9sing1.09Å1.10Å
C01H10sing1.08Å1.08Å
C02H11sing1.08Å1.08Å
C03H12sing1.08Å1.08Å
C05H13sing1.08Å1.08Å
C06H14sing1.08Å1.08Å
C07H15sing1.09Å1.10Å
C07H16sing1.09Å1.10Å
C08H17sing1.09Å1.10Å
C09H18sing1.09Å1.10Å
C09H19sing1.09Å1.10Å
C14H20sing1.09Å1.10Å
C14H21sing1.09Å1.10Å
C23H22sing1.08Å1.08Å
C25H23sing1.08Å1.08Å
C27H24sing1.09Å1.10Å
C27H25sing1.09Å1.10Å
C30H26sing1.09Å1.10Å
C30H27sing1.09Å1.10Å
C31H28sing1.09Å1.10Å
C31H29sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C24C23C22106.5°107.5°
C23C24C25108.0°107.5°
C23C24H7126.0°126.2°
C24C23H22126.7°126.2°
C23C22N21108.5°108.2°
C23C22H6125.8°126.0°
C22C23H22126.7°126.3°
C24C25N21107.3°108.2°
C25C24H7126.0°126.3°
C24C25H23126.3°125.9°
C22N21C25109.6°108.7°
C22N21C20123.2°125.7°
N21C22H6125.8°125.8°
C25N21C20127.1°125.7°
N21C25H23126.3°125.9°
N21C20S26119.9°126.1°
N21C20N19131.4°126.1°
S26C20N19108.7°107.8°
C20S26C17100.3°88.9°
C20N19N18111.1°117.8°
S26C17N18109.0°107.7°
S26C17N16119.0°126.1°
N19N18C17110.9°117.7°
C28C27N16107.3°109.5°
C27C28C13114.2°109.3°
C27C28H8108.3°109.5°
C27C28H9108.3°109.5°
C28C27H24110.0°109.4°
C28C27H25110.0°109.5°
C27N16C17124.1°111.0°
C27N16C15106.5°111.2°
N16C27H24110.0°109.5°
N16C27H25110.0°109.5°
N18C17N16131.9°126.1°
C17N16C15129.0°111.0°
C28C13C12109.6°109.5°
C28C13C14116.0°109.1°
C28C13H3106.0°109.6°
C13C28H8108.3°109.5°
C13C28H9108.2°109.5°
N16C15C14114.1°109.5°
N16C15H4108.3°109.4°
N16C15H5108.3°109.4°
O29C12C13121.2°120.0°
O29C12N11117.3°120.0°
C12C13C14113.3°109.5°
C13C12N11121.4°120.0°
C12C13H3105.0°109.5°
C13C14C15121.7°109.3°
C14C13H3105.9°109.5°
C13C14H20106.4°109.5°
C13C14H21106.4°109.5°
C14C15H4108.3°109.5°
C14C15H5108.3°109.5°
C15C14H20106.3°109.5°
C15C14H21106.3°109.5°
C12N11C10124.8°120.6°
C12N11C30122.0°120.6°
C10N11C30113.2°118.7°
N11C10C09105.2°108.8°
N11C10H1110.5°109.6°
N11C10H2110.5°109.7°
N11C30C31120.2°108.8°
N11C30H26106.7°109.6°
N11C30H27106.7°109.6°
C10C09C08114.8°109.3°
C09C10H1110.5°109.6°
C09C10H2110.5°109.6°
C10C09H18108.1°109.5°
C10C09H19108.1°109.5°
C30C31C08115.0°109.4°
C31C30H26106.7°109.6°
C31C30H27106.7°109.5°
C30C31H28108.1°109.5°
C30C31H29108.1°109.4°
C04C07C08119.3°109.5°
C07C04C03118.6°120.0°
C07C04C05123.0°120.0°
C04C07H15106.9°109.4°
C04C07H16107.0°109.5°
C07C08C31109.4°109.5°
C07C08C09108.7°109.5°
C08C07H15107.0°109.5°
C08C07H16106.9°109.5°
C07C08H17109.4°109.4°
C31C08C09108.6°109.5°
C31C08H17110.5°109.5°
C08C31H28108.1°109.5°
C08C31H29108.1°109.5°
C09C08H17110.3°109.4°
C08C09H18108.2°109.5°
C08C09H19108.1°109.5°
C04C03C02121.2°120.0°
C03C04C05118.4°120.0°
C04C03H12119.4°120.0°
C03C02C01120.6°120.0°
C03C02H11119.7°120.0°
C02C03H12119.4°120.0°
C04C05C06120.0°120.0°
C04C05H13120.0°120.1°
C02C01C06118.8°120.0°
C02C01H10120.6°120.0°
C01C02H11119.7°120.0°
C05C06C01121.0°120.0°
C06C05H13120.0°120.0°
C05C06H14119.5°120.0°
C06C01H10120.6°120.0°
C01C06H14119.5°120.0°
H1C10H2109.5°109.6°
H4C15H5109.4°109.5°
H8C28H9109.4°109.6°
H15C07H16109.5°109.4°
H18C09H19109.5°109.5°
H20C14H21109.4°109.5°
H24C27H25109.5°109.4°
H26C30H27109.4°109.7°
H28C31H29109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C24C23C22H22180.0°179.7°
C23C24C25H7180.0°179.6°
C24C23C22N210.3°0.0°
C23C24C25N210.4°0.4°
C24C23C22H6179.7°179.8°
C23C24C25H23179.6°180.0°
C22C23C24C250.1°0.3°
C23C22N21H6180.0°179.7°
C23C22N21C250.6°0.3°
C23C22N21C20179.1°179.8°
C22C23C24H7179.9°179.8°
C24C25N21C220.6°0.5°
C24C25N21H23180.0°179.6°
C24C25N21C20179.0°179.7°
C25C24C23H22180.0°180.0°
C22N21C25C20178.4°179.9°
C22N21C20S2622.3°180.0°
C22N21C20N19157.6°0.2°
N21C22C23H22179.7°179.7°
C22N21C25H23179.4°180.0°
C25N21C20S26155.9°0.1°
C25N21C20N1924.2°179.7°
C25N21C22H6179.4°180.0°
N21C25C24H7179.6°180.0°
N21C20S26N19179.9°179.8°
N21C20S26C17179.8°179.9°
N21C20N19N18180.0°180.0°
C20N21C22H60.9°0.1°
C20N21C25H231.0°0.1°
S26C20N19N180.1°0.2°
C20S26C17N180.3°0.3°
C20S26C17N16178.4°180.0°
N19C20S26C170.2°0.2°
C20N19N18C170.3°0.1°
S26C17N18N190.4°0.2°
S26C17N16C2717.7°56.1°
S26C17N18N16177.7°179.7°
S26C17N16C15153.7°179.7°
N19N18C17N16178.1°180.0°
C28C27N16H24119.7°120.0°
C28C27N16H25119.6°120.1°
C28C27N16C17102.7°174.1°
C27C28C13H8120.7°119.9°
C27C28C13H9120.7°120.0°
C28C27N16C1570.4°61.8°
C27C28C13C12154.8°62.2°
C27C28C13C1424.9°57.6°
C27C28C13H392.3°177.6°
C27C28H8H9117.8°120.2°
C28C27H24H25121.0°119.9°
C27N16C17N18164.7°124.2°
C27N16C17C15171.4°124.2°
N16C27C28C1362.2°59.2°
C27N16C15C1444.8°61.7°
C27N16C15H476.0°58.3°
C27N16C15H5165.5°178.3°
N16C27C28H858.5°60.7°
N16C27C28H9177.1°179.1°
N16C27H24H25121.0°120.0°
N18C17N16C1523.9°0.0°
C17N16C15C14127.8°174.2°
C17N16C15H4111.5°65.8°
C17N16C15H57.1°54.2°
C17N16C27H24137.7°54.2°
C17N16C27H2517.0°65.8°
C28C13C12O2936.2°110.6°
C28C13C12C14131.3°119.6°
C28C13C12H3113.5°120.2°
C28C13C14H3117.3°120.0°
C28C13C14C151.0°57.6°
C28C13C12N11140.6°69.5°
C13C28H8H9117.8°120.0°
C28C13C14H20122.7°177.6°
C28C13C14H21120.7°62.3°
C13C28C27H2457.4°179.2°
C13C28C27H25178.1°60.9°
N16C15C14C139.8°59.2°
N16C15C14H4120.7°120.0°
N16C15C14H5120.7°120.0°
N16C15H4H5117.8°119.9°
N16C15C14H20111.9°179.1°
N16C15C14H21131.5°60.8°
C15N16C27H2449.3°178.3°
C15N16C27H25170.0°58.3°
O29C12C13N11176.8°179.9°
O29C12C13C1495.1°9.0°
O29C12N11C102.5°5.6°
O29C12N11C30179.2°174.4°
O29C12C13H3149.7°129.2°
C12C13C14H3114.6°120.2°
C12C13C14C15127.1°62.2°
C13C12N11C10179.4°174.4°
C13C12N11C303.9°5.5°
C12C13C28H834.1°177.9°
C12C13C28H984.5°57.7°
C12C13C14H205.4°57.7°
C12C13C14H21111.2°177.8°
C13C14C15H20121.7°119.9°
C13C14C15H21121.7°119.9°
C14C13C12N1188.1°170.9°
C13C14C15H4110.9°60.8°
C13C14C15H5130.5°179.2°
C14C13C28H895.8°62.3°
C14C13C28H9145.7°177.6°
C13C14H20H21114.5°120.1°
C15C14C13H3118.3°177.6°
C14C15H4H5117.9°120.0°
C15C14H20H21114.4°120.1°
C12N11C10C30177.0°180.0°
C12N11C10C09148.6°126.3°
C12N11C30C31163.3°126.4°
C12N11C10H129.2°6.6°
C12N11C10H292.1°113.7°
N11C12C13H327.1°50.7°
C12N11C30H2641.8°6.6°
C12N11C30H2775.1°113.9°
N11C10C09H1119.3°119.7°
N11C10C09H2119.3°120.0°
C10N11C30C3119.6°53.5°
N11C10C09C0872.7°54.7°
N11C10H1H2122.0°120.4°
N11C10C09H1848.1°174.6°
N11C10C09H19166.5°65.3°
C10N11C30H26141.1°173.4°
C10N11C30H27102.0°66.2°
C30N11C10C0928.4°53.6°
N11C30C31H26121.5°119.8°
N11C30C31H27121.5°119.7°
N11C30C31C0834.7°54.6°
C30N11C10H1147.8°173.4°
C30N11C10H290.9°66.3°
N11C30H26H27115.1°120.3°
N11C30C31H2886.1°174.6°
N11C30C31H29155.5°65.4°
C10C09C08C0760.6°178.6°
C10C09C08C3158.4°61.4°
C10C09C08H18120.8°120.0°
C10C09C08H19120.8°120.0°
C09C10H1H2122.0°120.3°
C10C09C08H17179.5°58.6°
C10C09H18H19117.6°120.1°
C30C31C08C07114.8°178.6°
C30C31C08H28120.8°120.0°
C30C31C08H29120.8°119.9°
C30C31C08C093.7°61.3°
C30C31C08H17124.7°58.7°
C31C30H26H27115.1°120.3°
C30C31H28H29117.5°120.0°
C04C07C08H15121.4°120.0°
C04C07C08H16121.4°120.0°
C04C07C08C3198.8°64.9°
C04C07C08C09142.8°175.0°
C07C04C03C05178.2°179.9°
C07C04C03C02179.9°180.0°
C07C04C05C06179.5°180.0°
C07C04C03H120.1°0.0°
C07C04C05H130.5°0.1°
C04C07H15H16115.6°120.0°
C04C07C08H1722.3°55.0°
C07C08C31C09118.5°120.0°
C07C08C31H17120.5°120.0°
C07C08C09H17120.0°120.0°
C08C07C04C03139.0°90.0°
C08C07C04C0542.9°89.9°
C08C07H15H16115.5°120.0°
C07C08C09H18178.7°58.6°
C07C08C09H1960.2°61.4°
C07C08C31H286.0°58.7°
C07C08C31H29124.4°61.4°
C31C08C09H17121.1°120.0°
C31C08C07H1522.6°55.0°
C31C08C07H16139.8°175.0°
C31C08C09H1862.4°178.7°
C31C08C09H19179.1°58.6°
C08C31C30H26156.2°174.4°
C08C31C30H2786.8°65.1°
C08C31H28H29117.5°120.1°
C08C09C10H1168.0°174.4°
C08C09C10H246.6°65.3°
C09C08C07H1595.8°65.0°
C09C08C07H1621.4°55.0°
C08C09H18H19117.6°120.0°
C09C08C31H28124.5°178.7°
C09C08C31H29117.1°58.6°
C04C03C02H12180.0°180.0°
C04C03C02C011.4°0.0°
C03C04C05C061.4°0.1°
C04C03C02H11178.6°180.0°
C03C04C05H13178.6°180.0°
C03C04C07H1599.6°150.0°
C03C04C07H1617.6°30.1°
C02C03C04C051.9°0.0°
C03C02C01H11180.0°180.0°
C03C02C01C060.3°0.0°
C03C02C01H10179.7°179.7°
C04C05C06H13180.0°179.9°
C04C05C06C010.3°0.1°
C05C04C03H12178.1°179.9°
C04C05C06H14179.7°179.7°
C05C04C07H1578.5°30.1°
C05C04C07H16164.3°150.0°
C02C01C06C050.2°0.1°
C02C01C06H10180.0°179.7°
C01C02C03H12178.6°180.0°
C02C01C06H14179.8°179.7°
C05C06C01H14180.0°179.7°
C05C06C01H10179.8°179.7°
C06C01C02H11179.7°180.0°
C01C06C05H13179.7°180.0°
H1C10C09H1871.2°65.6°
H1C10C09H1947.2°54.4°
H2C10C09H18167.4°54.6°
H2C10C09H1974.2°174.7°
H3C13C28H8147.0°57.7°
H3C13C28H928.4°62.4°
H3C13C14H20120.0°62.5°
H3C13C14H213.4°57.7°
H4C15C14H20127.4°59.1°
H4C15C14H2110.9°179.2°
H5C15C14H208.8°60.9°
H5C15C14H21107.8°59.2°
H6C22C23H220.4°0.0°
H7C24C23H220.0°0.4°
H7C24C25H230.4°0.4°
H8C28C27H24178.2°59.3°
H8C28C27H2561.1°179.2°
H9C28C27H2463.3°60.9°
H9C28C27H2557.4°59.0°
H10C01C02H110.3°0.3°
H10C01C06H140.2°0.0°
H11C02C03H121.4°0.0°
H13C05C06H140.3°0.3°
H15C07C08H17143.7°175.0°
H16C07C08H1799.1°65.0°
H17C08C09H1858.7°61.3°
H17C08C09H1959.7°178.6°
H17C08C31H28114.5°61.3°
H17C08C31H293.9°178.6°
H26C30C31H2835.4°65.6°
H26C30C31H2983.0°54.5°
H27C30C31H28152.4°54.9°
H27C30C31H2934.0°174.9°

222624

PDB entries from 2024-07-17

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