Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

HY7

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C6sing1.53Å1.57Å
C5N2sing1.47Å1.47Å
C6N3sing1.47Å1.49Å
N3C7sing1.47Å1.50Å
N3C8sing1.47Å1.49Å
C8C9sing1.53Å1.54Å
C9N2sing1.47Å1.51Å
N2C4sing1.47Å1.47Å
C4C3sing1.51Å1.50Å
C3N4doub1.30Å1.29Å
C3N1sing1.36Å1.35Å
N4C10sing1.34Å1.37Å
C10C11sing1.47Å1.39ÅAromatic
C10C1doub1.39Å1.38ÅAromatic
C11C12sing1.39Å1.39ÅAromatic
C11C16doub1.41Å1.39ÅAromatic
C12C13doub1.38Å1.38ÅAromatic
C13BR1sing1.89Å1.91Å
C13C14sing1.39Å1.43ÅAromatic
C14C15doub1.38Å1.39ÅAromatic
C15C16sing1.39Å1.38ÅAromatic
C16O2sing1.35Å1.35ÅAromatic
O2C1sing1.35Å1.32ÅAromatic
C1C2sing1.41Å1.41Å
C2O1doub1.22Å1.24Å
C2N1sing1.35Å1.36Å
C5H51Csing1.09Å1.10Å
C5H52Csing1.09Å1.10Å
C6H61Csing1.09Å1.10Å
C6H62Csing1.09Å1.10Å
C7H71Csing1.09Å1.10Å
C7H72Csing1.09Å1.10Å
C7H73Csing1.09Å1.10Å
C8H81Csing1.09Å1.10Å
C8H82Csing1.09Å1.10Å
C9H91Csing1.09Å1.10Å
C9H92Csing1.09Å1.10Å
C4H41Csing1.09Å1.10Å
C4H42Csing1.09Å1.10Å
N1H1sing0.97Å1.00Å
C12H12sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C5N2110.2°109.4°
C5C6N3107.2°109.3°
C6C5H51C109.3°109.5°
C6C5H52C109.3°109.5°
C5C6H61C110.0°109.5°
C5C6H62C110.0°109.5°
C5N2C9116.6°110.8°
C5N2C4111.4°111.0°
N2C5H51C109.3°109.4°
N2C5H52C109.3°109.5°
C6N3C7112.2°111.0°
C6N3C8115.7°110.9°
N3C6H61C110.0°109.5°
N3C6H62C110.1°109.5°
C7N3C8102.3°111.0°
N3C7H71C109.5°109.5°
N3C7H72C109.5°109.4°
N3C7H73C109.5°109.5°
N3C8C9107.1°109.3°
N3C8H81C110.0°109.5°
N3C8H82C110.1°109.5°
C8C9N2105.1°109.4°
C9C8H81C110.1°109.5°
C9C8H82C110.1°109.5°
C8C9H91C110.6°109.5°
C8C9H92C110.6°109.5°
C9N2C4111.9°111.1°
N2C9H91C110.5°109.5°
N2C9H92C110.6°109.4°
N2C4C3119.8°109.5°
N2C4H41C106.8°109.5°
N2C4H42C106.8°109.4°
C4C3N4120.1°119.1°
C4C3N1118.1°119.1°
C3C4H41C106.8°109.5°
C3C4H42C106.8°109.5°
N4C3N1121.3°121.8°
C3N4C10121.4°121.2°
C3N1C2121.8°120.5°
C3N1H1119.1°119.7°
N4C10C11134.5°134.3°
N4C10C1118.0°120.0°
C11C10C1107.4°105.7°
C10C11C12132.5°134.1°
C10C11C16107.2°105.7°
C10C1O2107.1°109.0°
C10C1C2120.9°118.1°
C12C11C16120.3°120.2°
C11C12C13112.4°119.7°
C11C12H12123.8°120.1°
C11C16C15127.6°119.2°
C11C16O2105.5°108.3°
C12C13BR1117.4°119.9°
C12C13C14128.0°120.2°
C13C12H12123.8°120.2°
BR1C13C14114.6°119.9°
C13C14C15118.2°120.6°
C13C14H14120.9°119.7°
C14C15C16113.4°120.1°
C15C14H14120.9°119.7°
C14C15H15123.3°119.9°
C15C16O2126.8°132.5°
C16C15H15123.3°120.0°
C16O2C1112.5°111.3°
O2C1C2131.6°132.9°
C1C2O1124.1°120.8°
C1C2N1115.8°118.5°
O1C2N1120.0°120.7°
C2N1H1119.1°119.8°
H51CC5H52C109.5°109.5°
H61CC6H62C109.5°109.5°
H71CC7H72C109.5°109.5°
H71CC7H73C109.5°109.5°
H72CC7H73C109.5°109.5°
H81CC8H82C109.5°109.5°
H91CC9H92C109.5°109.4°
H41CC4H42C109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C5N2H51C120.1°119.9°
C6C5N2H52C120.1°120.0°
C5C6N3H61C119.6°119.9°
C5C6N3H62C119.7°120.0°
C5C6N3C7173.5°176.8°
C5C6N3C856.5°59.4°
C6C5N2C956.3°59.3°
C6C5N2C4173.7°176.8°
C6C5H51CH52C119.7°120.1°
C5C6H61CH62C121.1°120.0°
N2C5C6N348.7°58.4°
C5N2C9C861.1°59.3°
C5N2C9C4129.8°123.9°
C5N2C4C378.2°170.0°
N2C5H51CH52C119.6°120.0°
N2C5C6H61C168.4°178.4°
N2C5C6H62C70.9°61.6°
C5N2C9H91C58.2°60.7°
C5N2C9H92C179.6°179.3°
C5N2C4H41C160.3°50.0°
C5N2C4H42C43.2°70.0°
C6N3C7C8124.7°123.8°
C6N3C8C964.1°59.3°
N3C6C5H51C168.8°178.4°
N3C6C5H52C71.4°61.5°
N3C6H61CH62C121.0°120.1°
C6N3C7H71C180.0°60.0°
C6N3C7H72C60.0°180.0°
C6N3C7H73C60.0°60.1°
C6N3C8H81C176.3°179.3°
C6N3C8H82C55.6°60.6°
C7N3C8C9173.6°176.9°
C7N3C6H61C66.9°56.9°
C7N3C6H62C53.8°63.2°
N3C7H71CH72C120.0°120.0°
N3C7H71CH73C120.0°120.0°
N3C7H72CH73C120.0°119.9°
C7N3C8H81C54.0°56.9°
C7N3C8H82C66.8°63.2°
N3C8C9H81C119.6°120.0°
N3C8C9H82C119.6°119.9°
N3C8C9N259.6°58.4°
C8N3C6H61C176.2°179.3°
C8N3C6H62C63.1°60.6°
C8N3C7H71C55.3°63.8°
C8N3C7H72C175.3°56.2°
C8N3C7H73C64.7°176.2°
N3C8H81CH82C121.1°120.1°
N3C8C9H91C59.7°61.6°
N3C8C9H92C178.9°178.4°
C8C9N2H91C119.3°120.0°
C8C9N2H92C119.3°120.0°
C8C9N2C4169.1°176.8°
C9C8H81CH82C121.1°120.0°
C8C9H91CH92C122.0°120.0°
C9N2C4C354.2°66.2°
C9N2C5H51C176.4°179.3°
C9N2C5H52C63.9°60.7°
N2C9C8H81C179.1°178.4°
N2C9C8H82C60.1°61.5°
N2C9H91CH92C122.0°120.0°
C9N2C4H41C67.2°173.8°
C9N2C4H42C175.7°53.8°
N2C4C3H41C121.4°120.1°
N2C4C3H42C121.5°120.0°
N2C4C3N4125.4°0.0°
N2C4C3N162.8°179.8°
C4N2C5H51C53.6°56.8°
C4N2C5H52C66.2°63.2°
C4N2C9H91C71.6°63.2°
C4N2C9H92C49.8°56.8°
N2C4H41CH42C115.3°120.0°
C4C3N4N1171.6°179.7°
C4C3N4C10175.6°180.0°
C4C3N1C2179.2°179.8°
C3C4H41CH42C115.3°120.0°
C4C3N1H10.8°0.0°
C3N4C10C11178.2°180.0°
C3N4C10C11.1°0.0°
N4C3N1C29.1°0.5°
N4C3C4H41C4.0°120.0°
N4C3C4H42C113.1°120.0°
N4C3N1H1170.9°179.7°
N1C3N4C104.0°0.3°
C3N1C2C110.4°0.5°
C3N1C2O1173.4°179.8°
C3N1C2H1180.0°179.7°
N1C3C4H41C175.8°59.7°
N1C3C4H42C58.7°60.3°
N4C10C11C1179.3°180.0°
N4C10C11C124.6°0.0°
N4C10C11C16178.6°180.0°
N4C10C1O2175.8°180.0°
N4C10C1C22.9°0.0°
C10C11C12C16176.5°180.0°
C10C11C12C13179.1°180.0°
C10C11C16C15179.8°180.0°
C10C11C16O22.3°0.0°
C11C10C1O23.6°0.0°
C11C10C1C2176.6°180.0°
C10C11C12H120.9°0.0°
C1C10C11C12176.1°180.0°
C1C10C11C160.7°0.0°
C10C1O2C165.4°0.0°
C10C1O2C2171.9°180.0°
C10C1C2O1176.6°180.0°
C10C1C2N17.4°0.3°
C11C12C13H12180.0°179.9°
C11C12C13BR1176.5°180.0°
C11C12C13C142.0°0.1°
C12C11C16C152.9°0.0°
C12C11C16O2179.6°180.0°
C16C11C12C132.6°0.1°
C11C16C15C141.9°0.0°
C11C16C15O2177.0°180.0°
C11C16O2C14.9°0.0°
C16C11C12H12177.4°180.0°
C11C16C15H15178.0°180.0°
C12C13BR1C14178.7°180.0°
C12C13C14C151.3°0.0°
C12C13C14H14178.7°180.0°
BR1C13C14C15177.2°180.0°
BR1C13C12H123.5°0.0°
BR1C13C14H142.8°0.0°
C13C14C15H14180.0°180.0°
C13C14C15C161.0°0.0°
C14C13C12H12178.0°180.0°
C13C14C15H15178.9°180.0°
C14C15C16H15180.0°180.0°
C14C15C16O2178.9°180.0°
C15C16O2C1177.6°180.0°
C16C15C14H14179.0°179.9°
C16O2C1C2177.3°180.0°
O2C16C15H151.0°0.0°
O2C1C2O15.6°0.0°
O2C1C2N1178.3°179.7°
C1C2O1N1175.9°179.7°
C1C2N1H1169.6°179.7°
O1C2N1H16.6°0.0°
H51CC5C6H61C71.5°61.7°
H51CC5C6H62C49.2°58.4°
H52CC5C6H61C48.3°58.4°
H52CC5C6H62C169.0°178.5°
H71CC7H72CH73C120.0°120.1°
H81CC8C9H91C59.8°58.4°
H81CC8C9H92C61.5°61.6°
H82CC8C9H91C179.4°178.4°
H82CC8C9H92C59.2°58.4°
H14C14C15H151.1°0.0°

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon