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Obsolete: HV5

HV5 was replaced with TBG on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.45Å
NHN1sing1.01Å1.02Å
NHN2sing1.01Å1.02Å
CACBsing1.53Å1.56Å
CACsing1.51Å1.55Å
CAHAsing1.09Å1.11Å
CBCG1sing1.53Å1.51Å
CBCG2sing1.53Å1.51Å
CBCG3sing1.53Å1.54Å
CG1HG11sing1.09Å1.11Å
CG1HG12sing1.09Å1.11Å
CG1HG13sing1.09Å1.11Å
CG2HG21sing1.09Å1.11Å
CG2HG22sing1.09Å1.11Å
CG2HG23sing1.09Å1.12Å
CG3HG31sing1.09Å1.11Å
CG3HG32sing1.09Å1.12Å
CG3HG33sing1.09Å1.11Å
COdoub1.21Å1.25Å
COXTsing1.34Å1.35Å
OXTHXTsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANHN1106.1°106.6°
CANHN2113.5°106.7°
NCACB106.0°109.5°
NCAC111.1°109.4°
NCAHA112.3°109.5°
HN1NHN2113.5°106.7°
CBCAC113.9°109.5°
CBCAHA109.4°109.5°
CACBCG1112.1°109.5°
CACBCG2108.3°109.4°
CACBCG3114.8°109.5°
CCAHA104.1°109.5°
CACO122.6°120.0°
CACOXT117.7°120.0°
CG1CBCG2106.1°109.4°
CG1CBCG3106.7°109.5°
CBCG1HG11112.1°109.6°
CBCG1HG12111.2°109.5°
CBCG1HG13111.2°109.4°
CG2CBCG3108.5°109.4°
CBCG2HG21108.3°109.5°
CBCG2HG22112.7°109.5°
CBCG2HG23112.6°109.5°
CBCG3HG31114.8°109.5°
CBCG3HG32110.3°109.5°
CBCG3HG33110.3°109.5°
HG11CG1HG12111.2°109.4°
HG11CG1HG13111.3°109.4°
HG12CG1HG1399.1°109.4°
HG21CG2HG22112.7°109.5°
HG21CG2HG23112.6°109.5°
HG22CG2HG2397.8°109.5°
HG31CG3HG32110.2°109.4°
HG31CG3HG33110.3°109.4°
HG32CG3HG33100.0°109.5°
OCOXT119.7°120.0°
COXTHXT117.7°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANHN1HN2125.3°113.8°
NCACBC122.5°120.0°
NCACBHA121.3°120.0°
NCACHA121.1°120.0°
NCACBCG1168.8°60.1°
NCACBCG274.5°180.0°
NCACBCG346.8°60.0°
NCACO64.6°30.0°
NCACOXT113.9°149.9°
HN1NCACB180.0°53.8°
HN1NCAC55.7°173.8°
HN1NCAHA60.5°66.2°
HN2NCACB54.7°60.0°
HN2NCAC179.0°60.0°
HN2NCAHA64.8°180.0°
CBCACHA119.2°120.0°
CACBCG1CG2118.0°120.0°
CACBCG1CG3126.4°120.1°
CACBCG2CG3125.1°120.0°
CACBCG1HG11180.0°180.0°
CACBCG1HG1254.8°59.9°
CACBCG1HG1354.7°60.0°
CACBCG2HG21180.0°60.0°
CACBCG2HG2254.7°180.0°
CACBCG2HG2354.7°60.0°
CACBCG3HG31180.0°60.0°
CACBCG3HG3254.8°59.9°
CACBCG3HG3354.7°180.0°
CBCACO55.0°90.0°
CBCACOXT126.5°90.1°
CCACBCG146.2°180.0°
CCACBCG2163.0°60.0°
CCACBCG375.7°60.0°
CACOOXT178.5°179.9°
CACOXTHXT180.0°180.0°
HACACBCG169.9°59.9°
HACACBCG246.9°60.0°
HACACBCG3168.2°180.0°
HACACO174.2°149.9°
HACACOXT7.3°29.9°
CG1CBCG2CG3114.3°120.0°
CBCG1HG11HG12125.2°120.1°
CBCG1HG11HG13125.3°120.0°
CBCG1HG12HG13117.1°120.0°
CG1CBCG2HG2159.5°60.0°
CG1CBCG2HG2265.9°60.0°
CG1CBCG2HG23175.3°180.0°
CG1CBCG3HG3155.2°60.1°
CG1CBCG3HG32179.6°180.0°
CG1CBCG3HG3370.1°59.9°
CG2CBCG1HG1162.0°60.0°
CG2CBCG1HG12172.8°60.0°
CG2CBCG1HG1363.3°180.0°
CBCG2HG21HG22125.3°120.0°
CBCG2HG21HG23125.2°120.0°
CBCG2HG22HG23118.6°120.0°
CG2CBCG3HG3158.8°180.0°
CG2CBCG3HG3266.4°60.1°
CG2CBCG3HG33175.9°60.0°
CG3CBCG1HG1153.5°59.9°
CG3CBCG1HG1271.7°180.0°
CG3CBCG1HG13178.8°60.0°
CG3CBCG2HG2154.9°180.0°
CG3CBCG2HG22179.8°60.0°
CG3CBCG2HG2370.4°60.0°
CBCG3HG31HG32125.3°120.0°
CBCG3HG31HG33125.3°120.0°
CBCG3HG32HG33116.1°120.1°
HG11CG1HG12HG13117.2°119.9°
HG21CG2HG22HG23118.6°120.0°
HG31CG3HG32HG33116.1°119.9°
OCOXTHXT1.5°0.1°

223166

PDB entries from 2024-07-31

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