HUV
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2G | PG | doub | 1.48Å | 1.50Å | |
| PG | O3B | sing | 1.61Å | 1.53Å | |
| PG | O1G | sing | 1.61Å | 1.48Å | |
| PG | O3G | sing | 1.61Å | 1.56Å | |
| O3B | PB | sing | 1.61Å | 1.55Å | |
| O2B | PB | doub | 1.48Å | 1.50Å | |
| O1B | PB | sing | 1.61Å | 1.55Å | |
| PB | O3A | sing | 1.61Å | 1.61Å | |
| O3A | PA | sing | 1.61Å | 1.64Å | |
| O1A | PA | doub | 1.48Å | 1.50Å | |
| O3' | C3' | sing | 1.43Å | 1.45Å | |
| PA | O2A | sing | 1.61Å | 1.55Å | |
| PA | O5' | sing | 1.61Å | 1.65Å | |
| C3' | C4' | sing | 1.55Å | 1.51Å | |
| C3' | C2' | sing | 1.55Å | 1.51Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C4' | O4' | sing | 1.44Å | 1.50Å | |
| C2' | C5 | sing | 1.54Å | 1.65Å | |
| O4' | C5 | sing | 1.43Å | 1.52Å | |
| C5 | N1 | sing | 1.47Å | 1.44Å | |
| N1 | C13 | sing | 1.37Å | 1.38Å | Aromatic |
| N1 | C10 | sing | 1.37Å | 1.37Å | Aromatic |
| C13 | C14 | doub | 1.34Å | 1.36Å | Aromatic |
| C10 | C11 | doub | 1.39Å | 1.40Å | Aromatic |
| C10 | C9 | sing | 1.41Å | 1.43Å | Aromatic |
| C14 | C9 | sing | 1.47Å | 1.41Å | Aromatic |
| C11 | C12 | sing | 1.36Å | 1.39Å | Aromatic |
| C9 | C8 | doub | 1.39Å | 1.39Å | Aromatic |
| C15 | O8 | sing | 1.45Å | 1.43Å | |
| C12 | C7 | doub | 1.40Å | 1.41Å | Aromatic |
| C8 | C7 | sing | 1.39Å | 1.40Å | Aromatic |
| C7 | C6 | sing | 1.47Å | 1.50Å | |
| O8 | C6 | sing | 1.35Å | 1.35Å | |
| C6 | O4 | doub | 1.22Å | 1.22Å | |
| C11 | H1 | sing | 1.08Å | 1.08Å | |
| C12 | H2 | sing | 1.08Å | 1.08Å | |
| C13 | H3 | sing | 1.08Å | 1.08Å | |
| C14 | H4 | sing | 1.08Å | 1.08Å | |
| C15 | H5 | sing | 1.09Å | 1.10Å | |
| C15 | H6 | sing | 1.09Å | 1.10Å | |
| C15 | H7 | sing | 1.09Å | 1.10Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| C2' | H9 | sing | 1.09Å | 1.10Å | |
| C3' | H10 | sing | 1.09Å | 1.10Å | |
| C4' | H11 | sing | 1.09Å | 1.10Å | |
| C5 | H12 | sing | 1.09Å | 1.10Å | |
| C5' | H13 | sing | 1.09Å | 1.10Å | |
| C5' | H14 | sing | 1.09Å | 1.10Å | |
| C8 | H15 | sing | 1.08Å | 1.08Å | |
| O1B | H16 | sing | 0.97Å | 0.95Å | |
| O1G | H17 | sing | 0.97Å | 0.95Å | |
| O2A | H18 | sing | 0.97Å | 0.95Å | |
| O3' | H19 | sing | 0.97Å | 0.95Å | |
| O3G | H20 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2G | PG | O3B | 94.3° | 109.5° |
| O2G | PG | O1G | 110.6° | 109.5° |
| O2G | PG | O3G | 121.4° | 109.5° |
| O3B | PG | O1G | 105.8° | 109.4° |
| O3B | PG | O3G | 109.1° | 109.5° |
| PG | O3B | PB | 128.4° | 134.0° |
| O1G | PG | O3G | 113.0° | 109.4° |
| PG | O1G | H17 | 109.5° | 114.0° |
| PG | O3G | H20 | 109.5° | 114.0° |
| O3B | PB | O2B | 104.5° | 109.5° |
| O3B | PB | O1B | 103.7° | 109.5° |
| O3B | PB | O3A | 100.3° | 109.5° |
| O2B | PB | O1B | 108.9° | 109.5° |
| O2B | PB | O3A | 119.0° | 109.4° |
| O1B | PB | O3A | 117.8° | 109.4° |
| PB | O1B | H16 | 109.5° | 114.0° |
| PB | O3A | PA | 119.6° | 134.0° |
| O3A | PA | O1A | 106.7° | 109.4° |
| O3A | PA | O2A | 117.2° | 109.5° |
| O3A | PA | O5' | 102.9° | 109.5° |
| O1A | PA | O2A | 112.6° | 109.5° |
| O1A | PA | O5' | 117.8° | 109.4° |
| O3' | C3' | C4' | 112.7° | 111.1° |
| O3' | C3' | C2' | 117.1° | 111.1° |
| O3' | C3' | H10 | 111.5° | 111.0° |
| C3' | O3' | H19 | 109.5° | 114.0° |
| O2A | PA | O5' | 99.6° | 109.5° |
| PA | O2A | H18 | 109.5° | 113.9° |
| PA | O5' | C5' | 123.5° | 123.0° |
| C4' | C3' | C2' | 92.9° | 100.9° |
| C3' | C4' | C5' | 110.2° | 110.3° |
| C3' | C4' | O4' | 106.7° | 105.1° |
| C4' | C3' | H10 | 110.6° | 111.2° |
| C3' | C4' | H11 | 107.3° | 110.3° |
| C3' | C2' | C5 | 105.1° | 102.2° |
| C3' | C2' | H8 | 110.5° | 110.8° |
| C3' | C2' | H9 | 110.5° | 111.0° |
| C2' | C3' | H10 | 110.7° | 111.1° |
| O5' | C5' | C4' | 115.1° | 109.5° |
| O5' | C5' | H13 | 108.0° | 109.5° |
| O5' | C5' | H14 | 108.1° | 109.4° |
| C5' | C4' | O4' | 117.3° | 110.3° |
| C5' | C4' | H11 | 107.4° | 110.4° |
| C4' | C5' | H13 | 108.1° | 109.5° |
| C4' | C5' | H14 | 108.1° | 109.5° |
| C4' | O4' | C5 | 111.6° | 110.0° |
| O4' | C4' | H11 | 107.5° | 110.4° |
| C2' | C5 | O4' | 91.1° | 107.6° |
| C2' | C5 | N1 | 88.8° | 109.8° |
| C5 | C2' | H8 | 110.6° | 110.9° |
| C5 | C2' | H9 | 110.6° | 110.9° |
| C2' | C5 | H12 | 102.3° | 109.8° |
| O4' | C5 | N1 | 151.9° | 109.8° |
| O4' | C5 | H12 | 103.4° | 110.0° |
| C5 | N1 | C13 | 129.2° | 125.0° |
| C5 | N1 | C10 | 123.2° | 125.0° |
| N1 | C5 | H12 | 104.1° | 109.8° |
| C13 | N1 | C10 | 107.5° | 110.0° |
| N1 | C13 | C14 | 111.8° | 110.0° |
| N1 | C13 | H3 | 124.1° | 125.0° |
| N1 | C10 | C11 | 130.3° | 133.3° |
| N1 | C10 | C9 | 107.4° | 107.1° |
| C13 | C14 | C9 | 105.4° | 106.9° |
| C14 | C13 | H3 | 124.1° | 125.0° |
| C13 | C14 | H4 | 127.3° | 126.6° |
| C11 | C10 | C9 | 122.3° | 119.7° |
| C10 | C11 | C12 | 116.3° | 120.2° |
| C10 | C11 | H1 | 121.9° | 119.9° |
| C10 | C9 | C14 | 107.8° | 106.0° |
| C10 | C9 | C8 | 119.4° | 120.0° |
| C14 | C9 | C8 | 132.8° | 134.0° |
| C9 | C14 | H4 | 127.3° | 126.5° |
| C11 | C12 | C7 | 123.1° | 120.7° |
| C12 | C11 | H1 | 121.9° | 119.9° |
| C11 | C12 | H2 | 118.5° | 119.7° |
| C9 | C8 | C7 | 119.3° | 119.4° |
| C9 | C8 | H15 | 120.4° | 120.3° |
| C15 | O8 | C6 | 124.0° | 117.1° |
| O8 | C15 | H5 | 109.5° | 109.5° |
| O8 | C15 | H6 | 109.5° | 109.5° |
| O8 | C15 | H7 | 109.5° | 109.5° |
| C12 | C7 | C8 | 119.6° | 120.0° |
| C12 | C7 | C6 | 123.8° | 120.0° |
| C7 | C12 | H2 | 118.4° | 119.6° |
| C8 | C7 | C6 | 116.6° | 120.0° |
| C7 | C8 | H15 | 120.3° | 120.3° |
| C7 | C6 | O8 | 119.3° | 120.1° |
| C7 | C6 | O4 | 122.0° | 120.0° |
| O8 | C6 | O4 | 118.7° | 120.0° |
| H5 | C15 | H6 | 109.5° | 109.4° |
| H5 | C15 | H7 | 109.5° | 109.5° |
| H6 | C15 | H7 | 109.4° | 109.5° |
| H8 | C2' | H9 | 109.5° | 110.8° |
| H13 | C5' | H14 | 109.4° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2G | PG | O3B | O1G | 112.8° | 120.0° |
| O2G | PG | O3B | O3G | 125.3° | 120.1° |
| O2G | PG | O1G | O3G | 139.7° | 120.0° |
| O2G | PG | O3B | PB | 143.8° | 44.9° |
| O2G | PG | O1G | H17 | 0.0° | 179.9° |
| O2G | PG | O3G | H20 | 0.0° | 60.0° |
| O3B | PG | O1G | O3G | 119.3° | 120.0° |
| PG | O3B | PB | O2B | 66.1° | 45.1° |
| PG | O3B | PB | O1B | 179.9° | 74.9° |
| PG | O3B | PB | O3A | 57.7° | 165.1° |
| O3B | PG | O1G | H17 | 100.9° | 60.0° |
| O3B | PG | O3G | H20 | 107.7° | 180.0° |
| O1G | PG | O3B | PB | 31.0° | 75.1° |
| O1G | PG | O3G | H20 | 134.8° | 60.0° |
| O3G | PG | O3B | PB | 90.8° | 165.0° |
| O3G | PG | O1G | H17 | 139.7° | 60.0° |
| O3B | PB | O2B | O1B | 110.3° | 120.1° |
| O3B | PB | O2B | O3A | 110.8° | 120.0° |
| O3B | PB | O1B | O3A | 109.7° | 120.0° |
| O3B | PB | O3A | PA | 117.6° | 159.9° |
| O3B | PB | O1B | H16 | 110.8° | 59.9° |
| O2B | PB | O1B | O3A | 139.5° | 119.9° |
| O2B | PB | O3A | PA | 4.5° | 39.9° |
| O2B | PB | O1B | H16 | 0.0° | 180.0° |
| O1B | PB | O3A | PA | 130.8° | 80.0° |
| PB | O3A | PA | O1A | 36.6° | 40.1° |
| PB | O3A | PA | O2A | 163.9° | 79.9° |
| PB | O3A | PA | O5' | 88.1° | 160.0° |
| O3A | PB | O1B | H16 | 139.5° | 60.1° |
| O3A | PA | O1A | O2A | 130.0° | 120.0° |
| O3A | PA | O1A | O5' | 115.0° | 120.0° |
| O3A | PA | O2A | O5' | 110.0° | 120.1° |
| O3A | PA | O5' | C5' | 72.0° | 175.0° |
| O3A | PA | O2A | H18 | 124.3° | 60.0° |
| O1A | PA | O2A | O5' | 125.7° | 119.9° |
| O1A | PA | O5' | C5' | 45.0° | 55.0° |
| O1A | PA | O2A | H18 | 0.0° | 180.0° |
| O3' | C3' | C4' | C2' | 121.1° | 117.9° |
| O3' | C3' | C4' | H10 | 125.6° | 124.2° |
| O3' | C3' | C2' | H10 | 129.3° | 124.1° |
| O3' | C3' | C4' | C5' | 69.9° | 86.7° |
| O3' | C3' | C4' | O4' | 161.7° | 154.4° |
| O3' | C3' | C2' | C5 | 174.1° | 152.1° |
| O3' | C3' | C2' | H8 | 66.6° | 89.7° |
| O3' | C3' | C2' | H9 | 54.8° | 33.8° |
| O3' | C3' | C4' | H11 | 46.7° | 35.4° |
| O2A | PA | O5' | C5' | 167.0° | 64.9° |
| PA | O5' | C5' | C4' | 139.5° | 180.0° |
| PA | O5' | C5' | H13 | 18.6° | 59.9° |
| PA | O5' | C5' | H14 | 99.7° | 60.0° |
| O5' | PA | O2A | H18 | 125.6° | 60.1° |
| C4' | C3' | C2' | H10 | 113.3° | 118.0° |
| C3' | C4' | C5' | O5' | 68.6° | 175.0° |
| C3' | C4' | C5' | O4' | 122.3° | 115.7° |
| C3' | C4' | C5' | H11 | 116.6° | 122.1° |
| C3' | C4' | O4' | H11 | 114.9° | 118.9° |
| C4' | C3' | C2' | C5 | 56.7° | 34.2° |
| C3' | C4' | O4' | C5 | 11.4° | 24.5° |
| C4' | C3' | C2' | H8 | 176.0° | 152.3° |
| C4' | C3' | C2' | H9 | 62.6° | 84.1° |
| C3' | C4' | C5' | H13 | 52.2° | 55.0° |
| C3' | C4' | C5' | H14 | 170.5° | 65.0° |
| C4' | C3' | O3' | H19 | 180.0° | 180.0° |
| C2' | C3' | C4' | C5' | 169.0° | 155.4° |
| C2' | C3' | C4' | O4' | 40.6° | 36.5° |
| C3' | C2' | C5 | H8 | 119.3° | 118.1° |
| C3' | C2' | C5 | H9 | 119.3° | 118.4° |
| C3' | C2' | C5 | O4' | 49.4° | 21.4° |
| C3' | C2' | C5 | N1 | 158.8° | 140.9° |
| C3' | C2' | H8 | H9 | 122.0° | 123.7° |
| C2' | C3' | C4' | H11 | 74.4° | 82.5° |
| C3' | C2' | C5 | H12 | 54.6° | 98.3° |
| C2' | C3' | O3' | H19 | 74.0° | 68.4° |
| O5' | C5' | C4' | H13 | 120.8° | 120.0° |
| O5' | C5' | C4' | H14 | 120.8° | 120.0° |
| O5' | C5' | C4' | O4' | 53.7° | 69.3° |
| O5' | C5' | C4' | H11 | 174.8° | 52.9° |
| O5' | C5' | H13 | H14 | 117.4° | 119.9° |
| C5' | C4' | O4' | H11 | 121.1° | 122.2° |
| C5' | C4' | O4' | C5 | 135.5° | 143.3° |
| C5' | C4' | C3' | H10 | 55.6° | 37.5° |
| C4' | C5' | H13 | H14 | 117.4° | 120.0° |
| C4' | O4' | C5 | C2' | 21.2° | 1.7° |
| C4' | O4' | C5 | N1 | 110.7° | 117.8° |
| O4' | C4' | C3' | H10 | 72.7° | 81.4° |
| C4' | O4' | C5 | H12 | 81.8° | 121.3° |
| O4' | C4' | C5' | H13 | 174.5° | 170.7° |
| O4' | C4' | C5' | H14 | 67.2° | 50.7° |
| C2' | C5 | O4' | N1 | 89.5° | 119.5° |
| C2' | C5 | O4' | H12 | 102.9° | 119.6° |
| C2' | C5 | N1 | H12 | 102.4° | 120.8° |
| C2' | C5 | N1 | C13 | 53.5° | 95.0° |
| C2' | C5 | N1 | C10 | 123.2° | 85.0° |
| C5 | C2' | H8 | H9 | 122.0° | 123.5° |
| C5 | C2' | C3' | H10 | 56.7° | 83.8° |
| O4' | C5 | N1 | H12 | 167.5° | 121.0° |
| O4' | C5 | N1 | C13 | 36.5° | 23.2° |
| O4' | C5 | N1 | C10 | 146.7° | 156.9° |
| O4' | C5 | C2' | H8 | 168.7° | 139.5° |
| O4' | C5 | C2' | H9 | 69.9° | 97.0° |
| C5 | O4' | C4' | H11 | 103.5° | 94.5° |
| C5 | N1 | C13 | C10 | 177.1° | 180.0° |
| C5 | N1 | C13 | C14 | 178.4° | 179.8° |
| C5 | N1 | C10 | C11 | 2.3° | 0.1° |
| C5 | N1 | C10 | C9 | 178.5° | 179.8° |
| C5 | N1 | C13 | H3 | 1.6° | 0.2° |
| N1 | C5 | C2' | H8 | 39.4° | 101.0° |
| N1 | C5 | C2' | H9 | 82.0° | 22.5° |
| N1 | C13 | C14 | H3 | 180.0° | 180.0° |
| C13 | N1 | C10 | C11 | 179.6° | 179.9° |
| C13 | N1 | C10 | C9 | 1.2° | 0.2° |
| N1 | C13 | C14 | C9 | 0.8° | 0.1° |
| N1 | C13 | C14 | H4 | 179.2° | 180.0° |
| C13 | N1 | C5 | H12 | 156.0° | 144.2° |
| C10 | N1 | C13 | C14 | 1.2° | 0.2° |
| N1 | C10 | C11 | C9 | 179.1° | 179.8° |
| N1 | C10 | C9 | C14 | 0.7° | 0.2° |
| N1 | C10 | C11 | C12 | 179.0° | 179.7° |
| N1 | C10 | C9 | C8 | 179.1° | 179.7° |
| N1 | C10 | C11 | H1 | 1.0° | 0.2° |
| C10 | N1 | C13 | H3 | 178.8° | 179.8° |
| C10 | N1 | C5 | H12 | 20.8° | 35.8° |
| C13 | C14 | C9 | C10 | 0.0° | 0.1° |
| C13 | C14 | C9 | H4 | 180.0° | 179.9° |
| C13 | C14 | C9 | C8 | 179.8° | 179.8° |
| C11 | C10 | C9 | C14 | 180.0° | 180.0° |
| C10 | C11 | C12 | H1 | 180.0° | 179.9° |
| C11 | C10 | C9 | C8 | 0.2° | 0.1° |
| C10 | C11 | C12 | C7 | 0.1° | 0.1° |
| C10 | C11 | C12 | H2 | 179.9° | 180.0° |
| C10 | C9 | C14 | C8 | 179.8° | 179.9° |
| C9 | C10 | C11 | C12 | 0.1° | 0.1° |
| C10 | C9 | C8 | C7 | 0.3° | 0.2° |
| C9 | C10 | C11 | H1 | 179.9° | 180.0° |
| C10 | C9 | C14 | H4 | 180.0° | 179.9° |
| C10 | C9 | C8 | H15 | 179.7° | 180.0° |
| C14 | C9 | C8 | C7 | 180.0° | 180.0° |
| C9 | C14 | C13 | H3 | 179.2° | 179.9° |
| C14 | C9 | C8 | H15 | 0.0° | 0.1° |
| C11 | C12 | C7 | H2 | 180.0° | 179.9° |
| C11 | C12 | C7 | C8 | 0.2° | 0.1° |
| C11 | C12 | C7 | C6 | 179.7° | 180.0° |
| C9 | C8 | C7 | C12 | 0.3° | 0.2° |
| C9 | C8 | C7 | H15 | 180.0° | 179.8° |
| C9 | C8 | C7 | C6 | 179.6° | 180.0° |
| C8 | C9 | C14 | H4 | 0.2° | 0.3° |
| C15 | O8 | C6 | C7 | 67.5° | 180.0° |
| C15 | O8 | C6 | O4 | 112.4° | 0.0° |
| O8 | C15 | H5 | H6 | 120.0° | 120.0° |
| O8 | C15 | H5 | H7 | 120.0° | 120.0° |
| O8 | C15 | H6 | H7 | 120.0° | 120.0° |
| C12 | C7 | C8 | C6 | 179.8° | 179.9° |
| C12 | C7 | C6 | O8 | 21.8° | 0.1° |
| C12 | C7 | C6 | O4 | 158.3° | 180.0° |
| C7 | C12 | C11 | H1 | 179.9° | 180.0° |
| C12 | C7 | C8 | H15 | 179.7° | 180.0° |
| C8 | C7 | C6 | O8 | 158.1° | 179.9° |
| C8 | C7 | C6 | O4 | 21.9° | 0.1° |
| C8 | C7 | C12 | H2 | 179.8° | 179.9° |
| C7 | C6 | O8 | O4 | 179.9° | 180.0° |
| C6 | C7 | C12 | H2 | 0.4° | 0.1° |
| C6 | C7 | C8 | H15 | 0.4° | 0.1° |
| C6 | O8 | C15 | H5 | 180.0° | 60.0° |
| C6 | O8 | C15 | H6 | 60.0° | 180.0° |
| C6 | O8 | C15 | H7 | 60.0° | 60.0° |
| H1 | C11 | C12 | H2 | 0.1° | 0.1° |
| H3 | C13 | C14 | H4 | 0.8° | 0.0° |
| H5 | C15 | H6 | H7 | 120.0° | 120.0° |
| H8 | C2' | C3' | H10 | 62.7° | 34.4° |
| H8 | C2' | C5 | H12 | 64.8° | 19.8° |
| H9 | C2' | C3' | H10 | 176.0° | 157.9° |
| H9 | C2' | C5 | H12 | 173.8° | 143.3° |
| H10 | C3' | C4' | H11 | 172.3° | 159.6° |
| H10 | C3' | O3' | H19 | 54.9° | 55.7° |
| H11 | C4' | C5' | H13 | 64.4° | 67.1° |
| H11 | C4' | C5' | H14 | 53.9° | 172.9° |
