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HND

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
H1C1sing1.09Å1.10Å
C2C1sing1.53Å1.54Å
C1O11sing1.43Å1.43Å
C1H1Asing1.09Å1.10Å
H2C2sing1.09Å1.10Å
H2AC2sing1.09Å1.10Å
C2C3sing1.53Å1.54Å
C4C3sing1.53Å1.56Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
H4C4sing1.09Å1.10Å
C5C4sing1.53Å1.55Å
C4O10sing1.43Å1.45Å
H5AC5sing1.09Å1.10Å
C6C5sing1.53Å1.55Å
C5H5sing1.09Å1.10Å
C7C6sing1.53Å1.55Å
H6C6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
H7C7sing1.09Å1.10Å
H7AC7sing1.09Å1.10Å
C7C8sing1.53Å1.54Å
C9C8sing1.53Å1.53Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
H9C9sing1.09Å1.10Å
H9AC9sing1.09Å1.10Å
C9H9Bsing1.09Å1.10Å
HO10O10sing0.97Å0.95Å
HO11O11sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
H1C1C2109.5°109.4°
H1C1O11109.5°109.5°
H1C1H1A109.4°109.5°
C2C1O11109.4°109.4°
C2C1H1A109.5°109.4°
C1C2H2109.1°109.5°
C1C2H2A108.9°109.4°
C1C2C3110.5°109.5°
O11C1H1A109.5°109.5°
C1O11HO11109.5°114.0°
H2C2H2A110.3°109.4°
H2C2C3109.1°109.5°
H2AC2C3108.9°109.5°
C2C3C4112.2°109.5°
C2C3H3108.6°109.4°
C2C3H3A107.9°109.5°
C4C3H3108.5°109.5°
C4C3H3A108.0°109.5°
C3C4H4107.1°109.5°
C3C4C5111.9°109.5°
C3C4O10110.3°109.5°
H3C3H3A111.6°109.5°
H4C4C5108.4°109.4°
H4C4O10110.1°109.5°
C5C4O10109.0°109.5°
C4C5H5A107.7°109.4°
C4C5C6114.8°109.4°
C4C5H5106.5°109.4°
C4O10HO10109.5°114.0°
H5AC5C6107.7°109.5°
H5AC5H5113.7°109.5°
C6C5H5106.6°109.5°
C5C6C7113.5°109.5°
C5C6H6108.2°109.5°
C5C6H6A107.2°109.5°
C7C6H6108.1°109.5°
C7C6H6A107.2°109.5°
C6C7H7108.7°109.5°
C6C7H7A108.1°109.5°
C6C7C8111.9°109.5°
H6C6H6A112.7°109.5°
H7C7H7A111.4°109.5°
H7C7C8108.7°109.4°
H7AC7C8108.1°109.5°
C7C8C9111.1°109.5°
C7C8H8108.9°109.5°
C7C8H8A108.6°109.5°
C9C8H8109.0°109.5°
C9C8H8A108.6°109.5°
C8C9H9109.5°109.5°
C8C9H9A109.5°109.5°
C8C9H9B109.4°109.5°
H8C8H8A110.7°109.5°
H9C9H9A109.5°109.4°
H9C9H9B109.5°109.4°
H9AC9H9B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
H1C1C2O11120.0°119.9°
H1C1C2H1A120.0°120.0°
H1C1O11H1A119.9°120.1°
H1C1C2H2173.8°60.0°
H1C1C2H2A65.7°179.9°
H1C1C2C353.8°60.0°
H1C1O11HO1154.8°60.1°
C2C1O11H1A120.0°120.0°
C1C2H2H2A119.6°119.9°
C1C2H2C3120.8°120.0°
C1C2H2AC3120.6°120.0°
C1C2C3C4171.9°180.0°
C1C2C3H351.9°60.0°
C1C2C3H3A69.3°60.0°
C2C1O11HO1165.2°180.0°
O11C1C2H253.8°59.9°
O11C1C2H2A174.2°60.0°
O11C1C2C366.2°180.0°
H1AC1C2H266.2°180.0°
H1AC1C2H2A54.2°60.0°
H1AC1C2C3173.8°60.0°
H1AC1O11HO11174.8°60.1°
H2C2H2AC3119.7°120.0°
H2C2C3C468.1°60.0°
H2C2C3H3171.9°180.0°
H2C2C3H3A50.7°60.0°
H2AC2C3C452.3°60.0°
H2AC2C3H367.7°60.0°
H2AC2C3H3A171.2°180.0°
C2C3C4H3120.0°120.0°
C2C3C4H3A118.8°120.0°
C2C3H3H3A118.9°120.0°
C2C3C4H446.0°55.0°
C2C3C4C572.7°175.0°
C2C3C4O10165.8°65.0°
C4C3H3H3A118.9°120.0°
C3C4H4C5120.9°120.0°
C3C4H4O10119.9°120.1°
C3C4C5O10122.2°120.1°
C3C4C5H5A75.6°55.0°
C3C4C5C6164.4°175.0°
C3C4C5H546.7°65.1°
C3C4O10HO10146.3°59.9°
H3C3C4H474.0°175.0°
H3C3C4C5167.3°65.0°
H3C3C4O1045.8°55.0°
H3AC3C4H4164.8°65.0°
H3AC3C4C546.1°55.0°
H3AC3C4O1075.4°175.0°
H4C4C5O10119.8°120.0°
H4C4C5H5A166.4°65.0°
H4C4C5C646.5°55.0°
H4C4C5H571.2°175.0°
H4C4O10HO1028.3°180.0°
C4C5H5AC6124.3°120.0°
C4C5H5AH5117.8°120.0°
C4C5C6H5117.6°119.9°
C4C5C6C764.8°180.0°
C4C5C6H655.2°60.0°
C4C5C6H6A177.0°60.0°
C5C4O10HO1090.5°60.1°
O10C4C5H5A46.6°175.0°
O10C4C5C673.4°65.0°
O10C4C5H5169.0°55.0°
H5AC5C6H5122.4°120.1°
H5AC5C6C7175.2°60.1°
H5AC5C6H664.8°60.0°
H5AC5C6H6A57.0°180.0°
C5C6C7H6120.0°120.0°
C5C6C7H6A118.2°120.0°
C5C6H6H6A118.4°120.0°
C5C6C7H7129.6°60.0°
C5C6C7H7A8.6°60.0°
C5C6C7C8110.3°180.0°
H5C5C6C752.9°60.0°
H5C5C6H6172.9°180.0°
H5C5C6H6A65.4°59.9°
C7C6H6H6A118.3°120.0°
C6C7H7H7A119.0°120.0°
C6C7H7C8122.0°120.0°
C6C7H7AC8121.3°120.0°
C6C7C8C9177.2°180.0°
C6C7C8H857.2°60.0°
C6C7C8H8A63.4°60.0°
H6C6C7H7110.3°180.0°
H6C6C7H7A128.6°60.0°
H6C6C7C89.7°60.0°
H6AC6C7H711.4°60.0°
H6AC6C7H7A109.6°180.0°
H6AC6C7C8131.4°60.0°
H7C7H7AC8119.3°120.0°
H7C7C8C962.7°60.0°
H7C7C8H8177.2°180.0°
H7C7C8H8A56.6°60.0°
H7AC7C8C958.3°60.0°
H7AC7C8H861.8°60.0°
H7AC7C8H8A177.6°180.0°
C7C8C9H8120.0°120.0°
C7C8C9H8A119.3°120.0°
C7C8H8H8A119.3°120.0°
C7C8C9H9121.4°60.0°
C7C8C9H9A118.6°60.0°
C7C8C9H9B1.4°180.0°
C9C8H8H8A119.4°120.0°
C8C9H9H9A120.0°120.0°
C8C9H9H9B120.0°120.1°
C8C9H9AH9B120.0°120.1°
H8C8C9H91.4°180.0°
H8C8C9H9A121.4°60.1°
H8C8C9H9B118.6°60.0°
H8AC8C9H9119.3°60.0°
H8AC8C9H9A0.7°179.9°
H8AC8C9H9B120.7°60.0°
H9C9H9AH9B120.0°119.9°

225681

PDB entries from 2024-10-02

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