HN5

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O8	C8	sing	1.43Å	1.44Å
C8	C8A	sing	1.52Å	1.53Å
C8	C7	sing	1.54Å	1.55Å
C8A	N4	sing	1.49Å	1.48Å
C8A	C1	sing	1.54Å	1.52Å
N4	C3	sing	1.46Å	1.49Å
N4	C5	sing	1.46Å	1.50Å
C3	C2	sing	1.55Å	1.56Å
C2	O2	sing	1.43Å	1.42Å
C2	C1	sing	1.55Å	1.55Å
C1	O1	sing	1.43Å	1.46Å
C7	C6	sing	1.53Å	1.54Å
C6	C5	sing	1.54Å	1.53Å
C5	C9	sing	1.53Å	1.55Å
C9	C10	sing	1.53Å	1.55Å
C10	C11	sing	1.51Å	1.53Å
C11	C16	doub	1.38Å	1.39Å	Aromatic
C11	C12	sing	1.38Å	1.40Å	Aromatic
C16	C15	sing	1.38Å	1.41Å	Aromatic
C15	C14	doub	1.38Å	1.41Å	Aromatic
C14	C17	sing	1.51Å	1.52Å
C14	C13	sing	1.38Å	1.52Å	Aromatic
C17	C20	sing	1.53Å	1.53Å
C17	C19	sing	1.53Å	1.52Å
C17	C18	sing	1.53Å	1.52Å
C13	C12	doub	1.38Å	1.48Å	Aromatic
O8	HO8	sing	0.97Å	0.95Å
C8	H8	sing	1.09Å	1.10Å
C8A	H8A	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
C3	H3A	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
O2	HO2	sing	0.97Å	0.95Å
C1	H1	sing	1.09Å	1.10Å
O1	HO1	sing	0.97Å	0.95Å
C7	H7	sing	1.09Å	1.10Å
C7	H7A	sing	1.09Å	1.10Å
C6	H6	sing	1.09Å	1.10Å
C6	H6A	sing	1.09Å	1.10Å
C5	H5	sing	1.09Å	1.10Å
C9	H9	sing	1.09Å	1.10Å
C9	H9A	sing	1.09Å	1.10Å
C10	H10	sing	1.09Å	1.10Å
C10	H10A	sing	1.09Å	1.10Å
C16	H16	sing	1.08Å	1.08Å
C15	H15	sing	1.08Å	1.08Å
C20	H20	sing	1.09Å	1.10Å
C20	H20A	sing	1.09Å	1.10Å
C20	H20B	sing	1.09Å	1.10Å
C19	H19	sing	1.09Å	1.10Å
C19	H19A	sing	1.09Å	1.10Å
C19	H19B	sing	1.09Å	1.10Å
C18	H18	sing	1.09Å	1.10Å
C18	H18A	sing	1.09Å	1.10Å
C18	H18B	sing	1.09Å	1.10Å
C13	H13	sing	1.08Å	1.08Å
C12	H12	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O8	C8	C8A	110.0°	109.9°
O8	C8	C7	109.2°	109.8°
C8	O8	HO8	109.5°	114.1°
O8	C8	H8	109.6°	109.8°
C8A	C8	C7	110.6°	107.6°
C8	C8A	N4	110.4°	107.3°
C8	C8A	C1	117.1°	113.3°
C8A	C8	H8	108.3°	109.8°
C8	C8A	H8A	102.0°	110.9°
C8	C7	C6	113.5°	110.6°
C7	C8	H8	109.1°	109.8°
C8	C7	H7	108.1°	109.2°
C8	C7	H7A	107.2°	109.3°
N4	C8A	C1	104.7°	102.2°
C8A	N4	C3	103.7°	105.5°
C8A	N4	C5	114.5°	109.7°
N4	C8A	H8A	115.0°	111.1°
C8A	C1	C2	102.1°	102.1°
C8A	C1	O1	112.6°	110.9°
C1	C8A	H8A	108.0°	111.6°
C8A	C1	H1	114.6°	110.9°
C3	N4	C5	116.4°	117.2°
N4	C3	C2	102.7°	105.9°
N4	C3	H3	111.8°	110.2°
N4	C3	H3A	113.2°	110.2°
N4	C5	C6	108.0°	107.9°
N4	C5	C9	115.0°	109.8°
N4	C5	H5	107.8°	109.8°
C3	C2	O2	108.3°	110.3°
C3	C2	C1	106.9°	105.0°
C2	C3	H3	111.8°	110.1°
C2	C3	H3A	113.3°	110.2°
C3	C2	H2	112.3°	110.3°
O2	C2	C1	110.6°	110.3°
O2	C2	H2	108.6°	110.3°
C2	O2	HO2	109.5°	114.0°
C2	C1	O1	115.4°	110.9°
C1	C2	H2	110.0°	110.5°
C2	C1	H1	111.7°	110.9°
O1	C1	H1	101.0°	110.8°
C1	O1	HO1	109.5°	114.1°
C7	C6	C5	109.7°	110.7°
C6	C7	H7	108.1°	109.2°
C6	C7	H7A	107.3°	109.3°
C7	C6	H6	109.4°	109.3°
C7	C6	H6A	109.4°	109.2°
C6	C5	C9	112.3°	109.8°
C5	C6	H6	109.4°	109.3°
C5	C6	H6A	109.4°	109.2°
C6	C5	H5	110.7°	109.8°
C5	C9	C10	115.5°	109.5°
C9	C5	H5	103.0°	109.8°
C5	C9	H9	107.5°	109.5°
C5	C9	H9A	106.1°	109.4°
C9	C10	C11	113.6°	109.5°
C10	C9	H9	107.5°	109.5°
C10	C9	H9A	106.1°	109.5°
C9	C10	H10	108.1°	109.5°
C9	C10	H10A	107.2°	109.5°
C10	C11	C16	117.3°	120.0°
C10	C11	C12	120.7°	120.0°
C11	C10	H10	108.1°	109.5°
C11	C10	H10A	107.2°	109.5°
C16	C11	C12	121.9°	120.0°
C11	C16	C15	120.3°	120.0°
C11	C16	H16	119.8°	120.0°
C11	C12	C13	121.7°	120.0°
C11	C12	H12	119.1°	120.0°
C16	C15	C14	121.1°	120.0°
C15	C16	H16	119.8°	120.0°
C16	C15	H15	119.5°	120.0°
C15	C14	C17	120.6°	120.0°
C15	C14	C13	120.7°	120.0°
C14	C15	H15	119.5°	120.0°
C17	C14	C13	118.7°	120.0°
C14	C17	C20	110.4°	109.4°
C14	C17	C19	112.3°	109.5°
C14	C17	C18	106.3°	109.5°
C14	C13	C12	114.2°	120.0°
C14	C13	H13	122.9°	120.0°
C20	C17	C19	110.2°	109.5°
C20	C17	C18	108.7°	109.5°
C17	C20	H20	109.5°	109.5°
C17	C20	H20A	109.5°	109.5°
C17	C20	H20B	109.4°	109.5°
C19	C17	C18	108.7°	109.5°
C17	C19	H19	109.5°	109.5°
C17	C19	H19A	109.5°	109.5°
C17	C19	H19B	109.4°	109.5°
C17	C18	H18	109.5°	109.5°
C17	C18	H18A	109.4°	109.5°
C17	C18	H18B	109.4°	109.5°
C12	C13	H13	122.9°	120.0°
C13	C12	H12	119.2°	120.0°
H3	C3	H3A	104.3°	110.2°
H7	C7	H7A	112.7°	109.2°
H6	C6	H6A	109.6°	109.1°
H9	C9	H9A	114.3°	109.5°
H10	C10	H10A	112.7°	109.5°
H20	C20	H20A	109.4°	109.4°
H20	C20	H20B	109.5°	109.5°
H20A	C20	H20B	109.5°	109.5°
H19	C19	H19A	109.4°	109.5°
H19	C19	H19B	109.5°	109.5°
H19A	C19	H19B	109.5°	109.4°
H18	C18	H18A	109.5°	109.4°
H18	C18	H18B	109.4°	109.5°
H18A	C18	H18B	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O8	C8	C8A	C7	120.7°	119.5°
O8	C8	C8A	H8	119.8°	120.9°
O8	C8	C7	H8	119.8°	120.9°
O8	C8	C8A	N4	171.8°	177.6°
O8	C8	C8A	C1	68.6°	65.6°
O8	C8	C7	C6	172.2°	175.9°
O8	C8	C8A	H8A	49.0°	60.8°
O8	C8	C7	H7	52.2°	55.7°
O8	C8	C7	H7A	69.6°	63.7°
C8A	C8	C7	H8	119.0°	119.6°
C8	C8A	N4	C1	126.9°	119.4°
C8	C8A	N4	H8A	114.7°	121.4°
C8	C8A	C1	H8A	114.3°	126.0°
C8	C8A	N4	C3	173.1°	163.3°
C8	C8A	N4	C5	58.9°	69.5°
C8	C8A	C1	C2	156.1°	155.1°
C8	C8A	C1	O1	31.8°	36.8°
C8A	C8	C7	C6	51.0°	56.4°
C8A	C8	O8	HO8	17.0°	180.0°
C8	C8A	C1	H1	82.9°	86.7°
C8A	C8	C7	H7	69.0°	63.9°
C8A	C8	C7	H7A	169.2°	176.7°
C7	C8	C8A	N4	51.0°	62.8°
C7	C8	C8A	C1	170.6°	174.9°
C8	C7	C6	H7	120.0°	120.2°
C8	C7	C6	H7A	118.2°	120.3°
C8	C7	C6	C5	54.4°	53.8°
C7	C8	O8	HO8	104.5°	61.8°
C7	C8	C8A	H8A	71.7°	58.7°
C8	C7	H7	H7A	118.3°	119.4°
C8	C7	C6	H6	174.4°	174.2°
C8	C7	C6	H6A	65.5°	66.5°
N4	C8A	C1	H8A	123.0°	118.8°
C8A	N4	C3	C5	126.7°	122.5°
C8A	N4	C3	C2	38.4°	29.5°
N4	C8A	C1	C2	33.5°	39.9°
N4	C8A	C1	O1	90.9°	78.3°
C8A	N4	C5	C6	61.6°	65.3°
C8A	N4	C5	C9	64.7°	54.3°
N4	C8A	C8	H8	68.4°	56.7°
C8A	N4	C3	H3	81.6°	89.6°
C8A	N4	C3	H3A	160.9°	148.6°
N4	C8A	C1	H1	154.4°	158.1°
C8A	N4	C5	H5	178.8°	175.1°
C1	C8A	N4	C3	46.2°	43.9°
C1	C8A	N4	C5	174.2°	171.1°
C8A	C1	C2	C3	9.5°	22.2°
C8A	C1	C2	O2	127.2°	141.1°
C8A	C1	C2	O1	122.4°	118.3°
C8A	C1	C2	H1	122.9°	118.2°
C8A	C1	O1	H1	122.7°	123.6°
C1	C8A	C8	H8	51.2°	55.3°
C8A	C1	C2	H2	112.7°	96.7°
C8A	C1	O1	HO1	18.2°	180.0°
N4	C3	C2	H3	120.0°	119.1°
N4	C3	C2	H3A	122.5°	119.1°
N4	C3	C2	O2	102.0°	115.3°
N4	C3	C2	C1	17.3°	3.6°
C3	N4	C5	C6	177.2°	174.4°
C3	N4	C5	C9	56.5°	66.0°
C3	N4	C8A	H8A	72.1°	75.2°
N4	C3	H3	H3A	122.7°	121.8°
N4	C3	C2	H2	138.0°	122.6°
C3	N4	C5	H5	57.6°	54.8°
C5	N4	C3	C2	165.1°	152.0°
N4	C5	C6	C7	56.8°	57.1°
N4	C5	C6	C9	127.8°	119.6°
N4	C5	C6	H5	117.7°	119.6°
N4	C5	C9	H5	116.9°	120.8°
N4	C5	C9	C10	87.2°	174.4°
C5	N4	C8A	H8A	55.8°	51.9°
C5	N4	C3	H3	45.1°	32.9°
C5	N4	C3	H3A	72.4°	88.9°
N4	C5	C6	H6	176.8°	177.5°
N4	C5	C6	H6A	63.2°	63.2°
N4	C5	C9	H9	32.8°	54.3°
N4	C5	C9	H9A	155.6°	65.6°
C3	C2	O2	C1	116.8°	115.6°
C3	C2	O2	H2	122.3°	122.1°
C3	C2	C1	H2	122.2°	118.9°
C3	C2	C1	O1	113.0°	96.0°
C2	C3	H3	H3A	122.8°	121.7°
C3	C2	O2	HO2	93.7°	61.4°
C3	C2	C1	H1	132.4°	140.4°
O2	C2	C1	H2	120.1°	122.2°
O2	C2	C1	O1	4.8°	22.9°
O2	C2	C3	H3	138.0°	125.6°
O2	C2	C3	H3A	20.5°	3.9°
O2	C2	C1	H1	109.9°	100.7°
C2	C1	O1	H1	120.7°	123.7°
C2	C1	C8A	H8A	89.6°	78.9°
C1	C2	C3	H3	102.7°	115.5°
C1	C2	C3	H3A	139.8°	122.8°
C1	C2	O2	HO2	23.1°	177.0°
C2	C1	O1	HO1	134.8°	67.3°
O1	C1	C8A	H8A	146.1°	162.8°
O1	C1	C2	H2	124.8°	145.0°
C7	C6	C5	H6	120.0°	120.4°
C7	C6	C5	H6A	119.9°	120.3°
C7	C6	C5	C9	71.0°	62.5°
C6	C7	C8	H8	68.0°	63.2°
C6	C7	H7	H7A	118.4°	119.5°
C7	C6	H6	H6A	119.9°	119.4°
C7	C6	C5	H5	174.5°	176.7°
C6	C5	C9	H5	119.1°	120.8°
C6	C5	C9	C10	148.8°	67.2°
C5	C6	C7	H7	65.6°	66.4°
C5	C6	C7	H7A	172.6°	174.1°
C5	C6	H6	H6A	119.9°	119.4°
C6	C5	C9	H9	91.2°	172.8°
C6	C5	C9	H9A	31.5°	52.8°
C5	C9	C10	H9	120.0°	120.0°
C5	C9	C10	H9A	117.3°	120.0°
C5	C9	C10	C11	172.9°	174.8°
C9	C5	C6	H6	49.0°	57.9°
C9	C5	C6	H6A	169.0°	177.2°
C5	C9	H9	H9A	117.5°	119.9°
C5	C9	C10	H10	52.9°	65.2°
C5	C9	C10	H10A	68.9°	54.8°
C9	C10	C11	H10	120.0°	120.0°
C9	C10	C11	H10A	118.2°	120.0°
C9	C10	C11	C16	121.5°	90.0°
C9	C10	C11	C12	59.5°	90.3°
C10	C9	C5	H5	29.7°	53.6°
C10	C9	H9	H9A	117.5°	120.0°
C9	C10	H10	H10A	118.3°	120.0°
C10	C11	C16	C12	179.0°	179.7°
C10	C11	C16	C15	178.7°	180.0°
C10	C11	C12	C13	179.4°	179.8°
C11	C10	C9	H9	67.1°	54.7°
C11	C10	C9	H9A	55.7°	65.3°
C11	C10	H10	H10A	118.3°	120.0°
C10	C11	C16	H16	1.3°	0.1°
C10	C11	C12	H12	0.6°	0.1°
C11	C16	C15	H16	180.0°	179.9°
C11	C16	C15	C14	2.0°	0.0°
C16	C11	C12	C13	0.4°	0.4°
C16	C11	C10	H10	118.5°	30.0°
C16	C11	C10	H10A	3.3°	150.0°
C11	C16	C15	H15	177.9°	179.9°
C16	C11	C12	H12	179.6°	179.7°
C12	C11	C16	C15	0.4°	0.3°
C11	C12	C13	C14	0.3°	0.4°
C11	C12	C13	H12	180.0°	179.9°
C12	C11	C10	H10	60.5°	149.8°
C12	C11	C10	H10A	177.7°	29.7°
C12	C11	C16	H16	179.6°	179.8°
C11	C12	C13	H13	179.7°	179.8°
C16	C15	C14	H15	180.0°	179.9°
C16	C15	C14	C17	180.0°	180.0°
C16	C15	C14	C13	2.8°	0.0°
C15	C14	C17	C13	177.2°	180.0°
C15	C14	C17	C20	134.1°	60.0°
C15	C14	C17	C19	10.7°	180.0°
C15	C14	C17	C18	108.1°	60.0°
C15	C14	C13	C12	1.9°	0.1°
C14	C15	C16	H16	177.9°	180.0°
C15	C14	C13	H13	178.1°	180.0°
C14	C17	C20	C19	124.6°	120.0°
C14	C17	C20	C18	116.3°	120.0°
C14	C17	C19	C18	117.4°	120.0°
C17	C14	C13	C12	179.1°	179.9°
C17	C14	C15	H15	0.0°	0.0°
C14	C17	C20	H20	146.2°	60.0°
C14	C17	C20	H20A	26.2°	179.9°
C14	C17	C20	H20B	93.8°	60.0°
C14	C17	C19	H19	73.4°	60.0°
C14	C17	C19	H19A	46.6°	180.0°
C14	C17	C19	H19B	166.6°	60.0°
C14	C17	C18	H18	88.4°	60.0°
C14	C17	C18	H18A	151.6°	179.9°
C14	C17	C18	H18B	31.5°	60.0°
C17	C14	C13	H13	0.9°	0.0°
C13	C14	C17	C20	48.7°	120.0°
C13	C14	C17	C19	172.1°	0.0°
C13	C14	C17	C18	69.0°	120.0°
C14	C13	C12	H13	180.0°	179.9°
C13	C14	C15	H15	177.1°	180.0°
C14	C13	C12	H12	179.7°	179.8°
C20	C17	C19	C18	119.1°	120.0°
C17	C20	H20	H20A	120.0°	119.9°
C17	C20	H20	H20B	120.0°	120.0°
C17	C20	H20A	H20B	120.0°	120.0°
C20	C17	C19	H19	163.1°	180.0°
C20	C17	C19	H19A	76.9°	60.0°
C20	C17	C19	H19B	43.1°	60.0°
C20	C17	C18	H18	152.8°	60.0°
C20	C17	C18	H18A	32.7°	60.0°
C20	C17	C18	H18B	87.3°	180.0°
C19	C17	C20	H20	21.6°	60.0°
C19	C17	C20	H20A	98.4°	60.0°
C19	C17	C20	H20B	141.6°	180.0°
C17	C19	H19	H19A	120.0°	120.0°
C17	C19	H19	H19B	120.0°	120.0°
C17	C19	H19A	H19B	120.0°	120.0°
C19	C17	C18	H18	32.7°	180.0°
C19	C17	C18	H18A	87.3°	60.0°
C19	C17	C18	H18B	152.7°	60.0°
C18	C17	C20	H20	97.5°	180.0°
C18	C17	C20	H20A	142.5°	60.1°
C18	C17	C20	H20B	22.5°	60.0°
C18	C17	C19	H19	44.0°	60.0°
C18	C17	C19	H19A	164.0°	60.0°
C18	C17	C19	H19B	76.0°	180.0°
C17	C18	H18	H18A	120.0°	120.0°
C17	C18	H18	H18B	120.0°	120.0°
C17	C18	H18A	H18B	120.0°	120.1°
HO8	O8	C8	H8	136.0°	59.1°
H8	C8	C8A	H8A	168.8°	178.3°
H8	C8	C7	H7	172.0°	176.6°
H8	C8	C7	H7A	50.3°	57.2°
H8A	C8A	C1	H1	31.4°	39.3°
H3	C3	C2	H2	18.0°	3.5°
H3A	C3	C2	H2	99.5°	118.2°
H2	C2	O2	HO2	144.0°	60.7°
H2	C2	C1	H1	10.2°	21.5°
H1	C1	O1	HO1	104.5°	56.4°
H7	C7	C6	H6	54.4°	54.0°
H7	C7	C6	H6A	174.5°	173.3°
H7A	C7	C6	H6	67.4°	65.5°
H7A	C7	C6	H6A	52.7°	53.8°
H6	C6	C5	H5	65.5°	62.9°
H6A	C6	C5	H5	54.6°	56.4°
H5	C5	C9	H9	149.7°	66.5°
H5	C5	C9	H9A	87.5°	173.6°
H9	C9	C10	H10	172.9°	174.7°
H9	C9	C10	H10A	51.1°	65.3°
H9A	C9	C10	H10	64.3°	54.7°
H9A	C9	C10	H10A	173.9°	174.8°
H16	C16	C15	H15	2.1°	0.0°
H20	C20	H20A	H20B	120.0°	120.0°
H19	C19	H19A	H19B	120.0°	120.0°
H18	C18	H18A	H18B	120.0°	120.0°
H13	C13	C12	H12	0.3°	0.1°

Definition date:	2008-09-25
Last modified:	2020-06-17
Release status:	REL
Processing site:	RCSB
Derived from:	3EJS