Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1 | O1 | doub | 1.21Å | 1.21Å | |
| C1 | C2 | sing | 1.51Å | 1.54Å | |
| C1 | N | sing | 1.35Å | 1.32Å | |
| C2 | C3 | sing | 1.51Å | 1.52Å | |
| C2 | C1' | sing | 1.53Å | 1.51Å | |
| C2 | H2 | sing | 1.09Å | 1.11Å | |
| C3 | O3 | doub | 1.21Å | 1.24Å | |
| C3 | O4 | sing | 1.34Å | 1.32Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å | |
| C1' | C2' | sing | 1.53Å | 1.53Å | |
| C1' | H1'1 | sing | 1.09Å | 1.12Å | |
| C1' | H1'2 | sing | 1.09Å | 1.11Å | |
| C2' | C3' | sing | 1.53Å | 1.53Å | |
| C2' | C4' | sing | 1.53Å | 1.56Å | |
| C2' | H2' | sing | 1.09Å | 1.11Å | |
| C3' | H3'1 | sing | 1.09Å | 1.11Å | |
| C3' | H3'2 | sing | 1.09Å | 1.11Å | |
| C3' | H3'3 | sing | 1.09Å | 1.12Å | |
| C4' | H4'1 | sing | 1.09Å | 1.11Å | |
| C4' | H4'2 | sing | 1.09Å | 1.12Å | |
| C4' | H4'3 | sing | 1.09Å | 1.12Å | |
| N | O5 | sing | 1.42Å | 1.39Å | |
| N | HN | sing | 0.97Å | 0.98Å | |
| O5 | HO5 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1 | C1 | C2 | 121.2° | 120.0° |
| O1 | C1 | N | 121.2° | 120.0° |
| C2 | C1 | N | 117.6° | 120.0° |
| C1 | C2 | C3 | 109.9° | 109.5° |
| C1 | C2 | C1' | 109.1° | 109.4° |
| C1 | C2 | H2 | 109.2° | 109.4° |
| C1 | N | O5 | 118.7° | 120.0° |
| C1 | N | HN | 118.5° | 120.0° |
| C3 | C2 | C1' | 108.8° | 109.5° |
| C3 | C2 | H2 | 109.5° | 109.5° |
| C2 | C3 | O3 | 121.6° | 120.0° |
| C2 | C3 | O4 | 116.3° | 120.1° |
| C1' | C2 | H2 | 110.3° | 109.5° |
| C2 | C1' | C2' | 114.9° | 109.5° |
| C2 | C1' | H1'1 | 110.2° | 109.4° |
| C2 | C1' | H1'2 | 110.2° | 109.5° |
| O3 | C3 | O4 | 122.1° | 119.9° |
| C3 | O4 | HO4 | 116.3° | 120.0° |
| C2' | C1' | H1'1 | 110.2° | 109.4° |
| C2' | C1' | H1'2 | 110.3° | 109.5° |
| C1' | C2' | C3' | 110.9° | 109.4° |
| C1' | C2' | C4' | 111.4° | 109.5° |
| C1' | C2' | H2' | 107.7° | 109.5° |
| H1'1 | C1' | H1'2 | 100.0° | 109.5° |
| C3' | C2' | C4' | 111.3° | 109.5° |
| C3' | C2' | H2' | 108.0° | 109.4° |
| C2' | C3' | H3'1 | 110.9° | 109.5° |
| C2' | C3' | H3'2 | 111.7° | 109.5° |
| C2' | C3' | H3'3 | 111.7° | 109.5° |
| C4' | C2' | H2' | 107.3° | 109.6° |
| C2' | C4' | H4'1 | 111.5° | 109.5° |
| C2' | C4' | H4'2 | 111.5° | 109.4° |
| C2' | C4' | H4'3 | 111.5° | 109.5° |
| H3'1 | C3' | H3'2 | 111.8° | 109.6° |
| H3'1 | C3' | H3'3 | 111.7° | 109.4° |
| H3'2 | C3' | H3'3 | 98.6° | 109.4° |
| H4'1 | C4' | H4'2 | 111.5° | 109.4° |
| H4'1 | C4' | H4'3 | 111.5° | 109.5° |
| H4'2 | C4' | H4'3 | 98.9° | 109.4° |
| O5 | N | HN | 122.8° | 120.0° |
| N | O5 | HO5 | 115.7° | 106.8° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1 | C1 | C2 | N | 179.9° | 180.0° |
| O1 | C1 | C2 | C3 | 67.2° | 120.1° |
| O1 | C1 | C2 | C1' | 52.0° | 0.0° |
| O1 | C1 | C2 | H2 | 172.7° | 119.9° |
| O1 | C1 | N | O5 | 0.8° | 0.1° |
| O1 | C1 | N | HN | 179.8° | 179.9° |
| C1 | C2 | C3 | C1' | 119.4° | 120.0° |
| C1 | C2 | C3 | H2 | 119.9° | 119.9° |
| C1 | C2 | C1' | H2 | 120.0° | 119.9° |
| C1 | C2 | C3 | O3 | 122.8° | 84.8° |
| C1 | C2 | C3 | O4 | 59.8° | 95.1° |
| C1 | C2 | C1' | C2' | 96.1° | 174.9° |
| C1 | C2 | C1' | H1'1 | 29.1° | 65.2° |
| C1 | C2 | C1' | H1'2 | 138.6° | 54.8° |
| C2 | C1 | N | O5 | 179.1° | 180.0° |
| C2 | C1 | N | HN | 0.4° | 0.0° |
| N | C1 | C2 | C3 | 112.6° | 60.0° |
| N | C1 | C2 | C1' | 128.1° | 180.0° |
| N | C1 | C2 | H2 | 7.5° | 60.0° |
| C1 | N | O5 | HN | 179.4° | 180.0° |
| C1 | N | O5 | HO5 | 146.5° | 180.0° |
| C3 | C2 | C1' | H2 | 120.1° | 120.1° |
| C2 | C3 | O3 | O4 | 177.2° | 180.0° |
| C2 | C3 | O4 | HO4 | 180.0° | 180.0° |
| C3 | C2 | C1' | C2' | 143.9° | 65.1° |
| C3 | C2 | C1' | H1'1 | 90.8° | 54.8° |
| C3 | C2 | C1' | H1'2 | 18.6° | 174.8° |
| C1' | C2 | C3 | O3 | 117.8° | 35.2° |
| C1' | C2 | C3 | O4 | 59.6° | 144.9° |
| C2 | C1' | C2' | H1'1 | 125.2° | 119.9° |
| C2 | C1' | C2' | H1'2 | 125.3° | 120.1° |
| C2 | C1' | H1'1 | H1'2 | 116.0° | 120.0° |
| C2 | C1' | C2' | C3' | 80.0° | 66.0° |
| C2 | C1' | C2' | C4' | 44.6° | 174.0° |
| C2 | C1' | C2' | H2' | 162.1° | 53.9° |
| H2 | C2 | C3 | O3 | 2.9° | 155.2° |
| H2 | C2 | C3 | O4 | 179.7° | 24.8° |
| H2 | C2 | C1' | C2' | 23.8° | 55.0° |
| H2 | C2 | C1' | H1'1 | 149.1° | 174.9° |
| H2 | C2 | C1' | H1'2 | 101.5° | 65.1° |
| O3 | C3 | O4 | HO4 | 2.6° | 0.0° |
| C2' | C1' | H1'1 | H1'2 | 116.1° | 120.0° |
| C1' | C2' | C3' | C4' | 124.6° | 120.0° |
| C1' | C2' | C3' | H2' | 117.8° | 119.9° |
| C1' | C2' | C4' | H2' | 117.7° | 120.1° |
| C1' | C2' | C3' | H3'1 | 179.9° | 179.9° |
| C1' | C2' | C3' | H3'2 | 54.7° | 59.9° |
| C1' | C2' | C3' | H3'3 | 54.7° | 60.1° |
| C1' | C2' | C4' | H4'1 | 180.0° | 55.1° |
| C1' | C2' | C4' | H4'2 | 54.7° | 64.8° |
| C1' | C2' | C4' | H4'3 | 54.7° | 175.2° |
| H1'1 | C1' | C2' | C3' | 154.8° | 174.1° |
| H1'1 | C1' | C2' | C4' | 80.7° | 54.1° |
| H1'1 | C1' | C2' | H2' | 36.8° | 66.0° |
| H1'2 | C1' | C2' | C3' | 45.3° | 54.1° |
| H1'2 | C1' | C2' | C4' | 169.8° | 65.9° |
| H1'2 | C1' | C2' | H2' | 72.7° | 174.0° |
| C3' | C2' | C4' | H2' | 117.9° | 120.0° |
| C2' | C3' | H3'1 | H3'2 | 125.3° | 120.1° |
| C2' | C3' | H3'1 | H3'3 | 125.2° | 119.9° |
| C2' | C3' | H3'2 | H3'3 | 117.5° | 120.0° |
| C3' | C2' | C4' | H4'1 | 55.7° | 64.8° |
| C3' | C2' | C4' | H4'2 | 69.6° | 175.2° |
| C3' | C2' | C4' | H4'3 | 179.0° | 55.3° |
| C4' | C2' | C3' | H3'1 | 55.3° | 59.9° |
| C4' | C2' | C3' | H3'2 | 179.3° | 179.9° |
| C4' | C2' | C3' | H3'3 | 69.9° | 60.0° |
| C2' | C4' | H4'1 | H4'2 | 125.3° | 120.0° |
| C2' | C4' | H4'1 | H4'3 | 125.3° | 120.1° |
| C2' | C4' | H4'2 | H4'3 | 117.3° | 120.0° |
| H2' | C2' | C3' | H3'1 | 62.2° | 60.1° |
| H2' | C2' | C3' | H3'2 | 63.1° | 60.0° |
| H2' | C2' | C3' | H3'3 | 172.5° | 180.0° |
| H2' | C2' | C4' | H4'1 | 62.3° | 175.2° |
| H2' | C2' | C4' | H4'2 | 172.5° | 55.3° |
| H2' | C2' | C4' | H4'3 | 63.0° | 64.7° |
| H3'1 | C3' | H3'2 | H3'3 | 117.6° | 119.9° |
| H4'1 | C4' | H4'2 | H4'3 | 117.4° | 120.0° |
| HN | N | O5 | HO5 | 32.9° | 0.0° |
