HL2
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O | doub | 1.21Å | 1.23Å | |
| C | CA | sing | 1.51Å | 1.51Å | |
| C | OXT | sing | 1.34Å | 1.43Å | |
| N | CA | sing | 1.47Å | 1.46Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | CB | sing | 1.53Å | 1.54Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | CG | sing | 1.53Å | 1.54Å | |
| CB | OH | sing | 1.43Å | 1.42Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CG | CD1 | sing | 1.53Å | 1.53Å | |
| CG | CD2 | sing | 1.53Å | 1.51Å | |
| CG | HG | sing | 1.09Å | 1.10Å | |
| OH | HOH | sing | 0.97Å | 0.95Å | |
| CD1 | HD1 | sing | 1.09Å | 1.10Å | |
| CD1 | HD1A | sing | 1.09Å | 1.10Å | |
| CD1 | HD1B | sing | 1.09Å | 1.10Å | |
| CD2 | HD2 | sing | 1.09Å | 1.10Å | |
| CD2 | HD2A | sing | 1.09Å | 1.10Å | |
| CD2 | HD2B | sing | 1.09Å | 1.10Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 117.7° | 120.0° |
| O | C | OXT | 121.2° | 120.0° |
| CA | C | OXT | 121.1° | 120.0° |
| C | CA | N | 112.1° | 109.5° |
| C | CA | CB | 108.7° | 109.5° |
| C | CA | HA | 106.2° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
| CA | N | H2 | 109.5° | 111.0° |
| CA | N | H | 109.5° | 111.1° |
| N | CA | CB | 102.6° | 109.5° |
| N | CA | HA | 112.0° | 109.4° |
| H2 | N | H | 109.5° | 111.0° |
| CB | CA | HA | 115.2° | 109.5° |
| CA | CB | CG | 119.7° | 109.4° |
| CA | CB | OH | 107.6° | 109.5° |
| CA | CB | HB | 102.5° | 109.5° |
| CG | CB | OH | 105.6° | 109.5° |
| CG | CB | HB | 104.7° | 109.4° |
| CB | CG | CD1 | 117.3° | 109.5° |
| CB | CG | CD2 | 107.8° | 109.5° |
| CB | CG | HG | 106.1° | 109.5° |
| OH | CB | HB | 117.4° | 109.5° |
| CB | OH | HOH | 109.5° | 114.0° |
| CD1 | CG | CD2 | 111.9° | 109.5° |
| CD1 | CG | HG | 101.4° | 109.4° |
| CG | CD1 | HD1 | 109.5° | 109.4° |
| CG | CD1 | HD1A | 109.4° | 109.5° |
| CG | CD1 | HD1B | 109.5° | 109.5° |
| CD2 | CG | HG | 112.2° | 109.5° |
| CG | CD2 | HD2 | 109.5° | 109.4° |
| CG | CD2 | HD2A | 109.5° | 109.5° |
| CG | CD2 | HD2B | 109.5° | 109.5° |
| HD1 | CD1 | HD1A | 109.5° | 109.5° |
| HD1 | CD1 | HD1B | 109.5° | 109.4° |
| HD1A | CD1 | HD1B | 109.5° | 109.5° |
| HD2 | CD2 | HD2A | 109.5° | 109.5° |
| HD2 | CD2 | HD2B | 109.4° | 109.5° |
| HD2A | CD2 | HD2B | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | OXT | 180.0° | 179.7° |
| O | C | CA | N | 91.4° | 20.0° |
| O | C | CA | CB | 21.3° | 100.0° |
| O | C | CA | HA | 145.9° | 140.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| C | CA | N | CB | 116.5° | 120.0° |
| C | CA | N | HA | 119.3° | 120.0° |
| C | CA | N | H2 | 180.0° | 66.1° |
| C | CA | N | H | 60.0° | 169.9° |
| C | CA | CB | HA | 119.1° | 120.0° |
| C | CA | CB | CG | 71.5° | 178.5° |
| C | CA | CB | OH | 168.1° | 58.5° |
| C | CA | CB | HB | 43.7° | 61.6° |
| CA | C | OXT | HXT | 180.0° | 179.7° |
| OXT | C | CA | N | 88.5° | 160.2° |
| OXT | C | CA | CB | 158.7° | 79.8° |
| OXT | C | CA | HA | 34.1° | 40.3° |
| CA | N | H2 | H | 120.0° | 124.0° |
| N | CA | CB | HA | 122.0° | 120.0° |
| N | CA | CB | CG | 169.6° | 58.5° |
| N | CA | CB | OH | 49.2° | 61.5° |
| N | CA | CB | HB | 75.2° | 178.4° |
| H2 | N | CA | CB | 63.5° | 53.9° |
| H2 | N | CA | HA | 60.7° | 173.9° |
| H | N | CA | CB | 176.5° | 70.1° |
| H | N | CA | HA | 59.3° | 49.9° |
| CA | CB | CG | OH | 121.4° | 120.0° |
| CA | CB | CG | HB | 114.0° | 120.0° |
| CA | CB | OH | HB | 114.9° | 120.0° |
| CA | CB | CG | CD1 | 5.6° | 174.5° |
| CA | CB | CG | CD2 | 132.8° | 65.5° |
| CA | CB | CG | HG | 106.8° | 54.5° |
| CA | CB | OH | HOH | 180.0° | 60.0° |
| HA | CA | CB | CG | 47.6° | 61.5° |
| HA | CA | CB | OH | 72.8° | 178.5° |
| HA | CA | CB | HB | 162.7° | 58.5° |
| CG | CB | OH | HB | 116.2° | 120.0° |
| CB | CG | CD1 | CD2 | 125.2° | 120.1° |
| CB | CG | CD1 | HG | 115.0° | 120.0° |
| CB | CG | CD2 | HG | 116.4° | 120.0° |
| CG | CB | OH | HOH | 51.0° | 60.0° |
| CB | CG | CD1 | HD1 | 180.0° | 54.7° |
| CB | CG | CD1 | HD1A | 60.0° | 174.8° |
| CB | CG | CD1 | HD1B | 60.0° | 65.2° |
| CB | CG | CD2 | HD2 | 180.0° | 60.0° |
| CB | CG | CD2 | HD2A | 60.0° | 180.0° |
| CB | CG | CD2 | HD2B | 60.0° | 60.0° |
| OH | CB | CG | CD1 | 127.0° | 54.5° |
| OH | CB | CG | CD2 | 105.8° | 174.5° |
| OH | CB | CG | HG | 14.6° | 65.5° |
| HB | CB | CG | CD1 | 108.4° | 65.5° |
| HB | CB | CG | CD2 | 18.8° | 54.5° |
| HB | CB | CG | HG | 139.2° | 174.5° |
| HB | CB | OH | HOH | 65.2° | 180.0° |
| CD1 | CG | CD2 | HG | 113.2° | 120.0° |
| CG | CD1 | HD1 | HD1A | 120.0° | 120.1° |
| CG | CD1 | HD1 | HD1B | 120.0° | 119.9° |
| CG | CD1 | HD1A | HD1B | 120.0° | 120.0° |
| CD1 | CG | CD2 | HD2 | 49.7° | 180.0° |
| CD1 | CG | CD2 | HD2A | 169.6° | 60.0° |
| CD1 | CG | CD2 | HD2B | 70.3° | 60.0° |
| CD2 | CG | CD1 | HD1 | 54.8° | 65.3° |
| CD2 | CG | CD1 | HD1A | 65.3° | 54.7° |
| CD2 | CG | CD1 | HD1B | 174.8° | 174.7° |
| CG | CD2 | HD2 | HD2A | 120.0° | 120.0° |
| CG | CD2 | HD2 | HD2B | 120.0° | 120.0° |
| CG | CD2 | HD2A | HD2B | 120.0° | 120.0° |
| HG | CG | CD1 | HD1 | 65.0° | 174.7° |
| HG | CG | CD1 | HD1A | 175.0° | 65.2° |
| HG | CG | CD1 | HD1B | 55.0° | 54.8° |
| HG | CG | CD2 | HD2 | 63.6° | 60.0° |
| HG | CG | CD2 | HD2A | 56.4° | 60.0° |
| HG | CG | CD2 | HD2B | 176.4° | 180.0° |
| HD1 | CD1 | HD1A | HD1B | 120.0° | 120.0° |
| HD2 | CD2 | HD2A | HD2B | 120.0° | 120.0° |
