Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

HK1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C16O3sing1.43Å1.43Å
O3C15sing1.36Å1.37Å
C17C15doub1.38Å1.39ÅAromatic
C17C18sing1.40Å1.40ÅAromatic
N2N1sing1.40Å1.37ÅAromatic
N2C8doub1.32Å1.34ÅAromatic
C15C13sing1.39Å1.41ÅAromatic
N1C7sing1.36Å1.35ÅAromatic
C8C18sing1.49Å1.46Å
C8C9sing1.40Å1.45ÅAromatic
C18C11doub1.39Å1.39ÅAromatic
C13O2sing1.36Å1.37Å
C13C12doub1.39Å1.39ÅAromatic
O2C14sing1.43Å1.43Å
C7C9doub1.36Å1.38ÅAromatic
C7C4sing1.48Å1.48Å
C9C10sing1.51Å1.48Å
C11C12sing1.38Å1.39ÅAromatic
C11C10sing1.51Å1.50Å
C3C4doub1.40Å1.39ÅAromatic
C3C2sing1.38Å1.38ÅAromatic
C4C5sing1.39Å1.39ÅAromatic
C2C1doub1.39Å1.39ÅAromatic
C5C6doub1.38Å1.38ÅAromatic
C1C6sing1.39Å1.39ÅAromatic
C1O1sing1.36Å1.37Å
O1H2sing0.97Å0.95Å
C6H6sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C3H4sing1.08Å1.08Å
C2H3sing1.08Å1.08Å
C10H8sing1.09Å1.10Å
C10H7sing1.09Å1.10Å
N1H1sing0.97Å1.00Å
C17H10sing1.08Å1.08Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C16H163sing1.09Å1.10Å
C12H9sing1.08Å1.08Å
C14H143sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16O3C15118.4°117.0°
O3C16H161109.5°109.5°
O3C16H162109.4°109.5°
O3C16H163109.5°109.5°
O3C15C17124.9°119.9°
O3C15C13115.2°120.0°
C15C17C18119.5°120.0°
C17C15C13119.8°120.1°
C15C17H10120.3°120.0°
C17C18C8130.0°130.9°
C17C18C11120.6°119.5°
C18C17H10120.3°120.0°
N1N2C8105.1°108.5°
N2N1C7112.9°107.9°
N2N1H1123.5°126.0°
N2C8C18142.6°142.8°
N2C8C9110.1°108.0°
C15C13O2115.4°120.0°
C15C13C12119.9°119.9°
N1C7C9106.7°107.5°
N1C7C4123.5°126.3°
C7N1H1123.6°126.0°
C18C8C9107.2°109.2°
C8C18C11109.4°109.5°
C8C9C7105.1°108.1°
C8C9C10109.5°107.4°
C18C11C12120.0°120.4°
C18C11C10110.1°107.8°
O2C13C12124.7°120.0°
C13O2C14118.1°117.0°
C13C12C11120.2°120.1°
C13C12H9119.9°120.0°
O2C14H143109.5°109.5°
O2C14H141109.5°109.5°
O2C14H142109.5°109.5°
C9C7C4129.7°126.3°
C7C9C10145.4°144.5°
C7C4C3121.0°120.1°
C7C4C5120.5°120.1°
C9C10C11103.8°106.1°
C9C10H8110.9°110.1°
C9C10H7110.9°110.1°
C12C11C10129.9°131.8°
C11C12H9119.9°120.0°
C11C10H8110.9°110.1°
C11C10H7110.9°110.2°
C4C3C2120.9°119.9°
C3C4C5118.4°119.8°
C4C3H4119.5°120.0°
C3C2C1120.0°120.1°
C2C3H4119.5°120.1°
C3C2H3120.0°119.9°
C4C5C6121.1°119.9°
C4C5H5119.5°120.1°
C2C1C6119.7°120.2°
C2C1O1121.6°120.0°
C1C2H3120.0°120.0°
C5C6C1119.9°120.1°
C5C6H6120.0°120.0°
C6C5H5119.4°120.0°
C6C1O1118.7°119.9°
C1C6H6120.1°120.0°
C1O1H2109.5°114.0°
H8C10H7109.5°110.2°
H161C16H162109.5°109.5°
H161C16H163109.5°109.5°
H162C16H163109.5°109.4°
H143C14H141109.4°109.4°
H143C14H142109.5°109.5°
H141C14H142109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16O3C15C171.7°0.1°
C16O3C15C13179.0°180.0°
O3C16H161H162120.0°120.0°
O3C16H161H163120.0°120.1°
O3C16H162H163120.0°120.0°
O3C15C17C13179.2°180.0°
O3C15C17C18179.4°180.0°
O3C15C13O21.7°0.1°
O3C15C13C12179.5°180.0°
O3C15C17H100.6°0.1°
C15O3C16H161180.0°59.9°
C15O3C16H16260.0°60.1°
C15O3C16H16360.0°180.0°
C15C17C18H10180.0°179.9°
C15C17C18C8178.1°180.0°
C15C17C18C110.5°0.0°
C17C15C13O2177.6°180.0°
C17C15C13C120.3°0.0°
C17C18C8N23.3°0.1°
C18C17C15C130.2°0.0°
C17C18C8C11178.8°180.0°
C17C18C8C9179.3°180.0°
C17C18C11C120.9°0.0°
C17C18C11C10178.4°180.0°
N2N1C7H1180.0°179.6°
N1N2C8C18175.5°179.7°
N1N2C8C90.5°0.3°
N2N1C7C90.4°0.4°
N2N1C7C4177.6°179.8°
C8N2N1C70.1°0.4°
N2C8C18C9176.0°180.0°
N2C8C18C11175.5°180.0°
N2C8C9C70.8°0.0°
N2C8C9C10179.3°180.0°
C8N2N1H1179.9°180.0°
C15C13O2C12177.7°180.0°
C15C13O2C14175.5°180.0°
C15C13C12C110.6°0.0°
C13C15C17H10179.8°180.0°
C15C13C12H9179.4°180.0°
N1C7C9C80.7°0.2°
N1C7C9C4177.8°179.8°
N1C7C9C10178.2°179.7°
N1C7C4C35.4°134.7°
N1C7C4C5178.1°45.2°
C18C8C9C7176.7°179.9°
C18C8C9C101.8°0.0°
C8C18C11C12178.0°180.0°
C8C18C11C102.7°0.0°
C8C18C17H101.9°0.1°
C9C8C18C110.5°0.0°
C8C9C7C10177.5°179.9°
C8C9C7C4177.1°179.9°
C8C9C10C113.3°0.0°
C8C9C10H8122.3°119.1°
C8C9C10H7115.8°119.2°
C18C11C12C130.9°0.0°
C18C11C10C93.6°0.0°
C18C11C12C10179.2°180.0°
C18C11C10H8122.7°119.1°
C18C11C10H7115.5°119.2°
C11C18C17H10179.5°180.0°
C18C11C12H9179.1°180.0°
O2C13C12C11177.0°180.0°
O2C13C12H93.0°0.1°
C13O2C14H143180.0°180.0°
C13O2C14H14160.0°60.0°
C13O2C14H14260.0°60.0°
C12C13O2C142.2°0.0°
C13C12C11H9180.0°180.0°
C13C12C11C10178.2°180.0°
O2C14H143H141120.0°119.9°
O2C14H143H142120.0°120.0°
O2C14H141H142120.0°120.0°
C7C9C10C11174.2°179.9°
C9C7C4C3172.1°45.1°
C9C7C4C54.4°135.0°
C7C9C10H855.1°60.9°
C7C9C10H766.7°60.7°
C9C7N1H1179.6°180.0°
C4C7C9C100.4°0.1°
C7C4C3C5176.6°179.9°
C7C4C3C2176.4°179.8°
C7C4C5C6176.8°179.9°
C7C4C5H53.2°0.1°
C7C4C3H43.5°0.0°
C4C7N1H12.4°0.2°
C9C10C11C12177.1°180.0°
C9C10C11H8119.1°119.1°
C9C10C11H7119.1°119.1°
C9C10H8H7122.6°121.6°
C12C11C10H858.0°60.8°
C12C11C10H763.8°60.9°
C11C10H8H7122.6°121.7°
C10C11C12H91.7°0.0°
C4C3C2H4180.0°179.8°
C4C3C2C10.3°0.5°
C3C4C5C60.2°0.0°
C3C4C5H5179.8°180.0°
C4C3C2H3179.7°180.0°
C2C3C4C50.2°0.3°
C3C2C1H3180.0°179.5°
C3C2C1C60.1°0.5°
C3C2C1O1178.8°179.8°
C4C5C6H5180.0°180.0°
C4C5C6C10.4°0.1°
C4C5C6H6179.6°179.9°
C5C4C3H4179.8°179.9°
C2C1C6C50.3°0.3°
C2C1C6O1178.7°179.7°
C2C1O1H2180.0°90.3°
C2C1C6H6179.8°179.7°
C1C2C3H4179.7°179.7°
C5C6C1H6180.0°180.0°
C5C6C1O1178.5°180.0°
C6C1O1H21.3°90.0°
C1C6C5H5179.6°180.0°
C6C1C2H3179.9°180.0°
O1C1C6H61.5°0.0°
O1C1C2H31.2°0.3°
H6C6C5H50.3°0.0°
H4C3C2H30.3°0.2°
H161C16H162H163120.0°120.0°
H143C14H141H142120.0°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon