HJV
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CG | CD | sing | 1.51Å | 1.50Å | |
| CG | CB | sing | 1.53Å | 1.52Å | |
| NE2 | CD | sing | 1.35Å | 1.32Å | |
| CD | OE1 | doub | 1.21Å | 1.23Å | |
| CB | CA | sing | 1.53Å | 1.54Å | |
| C | CA | sing | 1.51Å | 1.53Å | |
| C | O | doub | 1.21Å | 1.23Å | |
| CA | N | sing | 1.47Å | 1.46Å | |
| CN | N | sing | 1.47Å | 1.48Å | |
| C | OXT | sing | 1.34Å | 1.34Å | |
| CN | HN11 | sing | 1.09Å | 1.10Å | |
| CN | HN12 | sing | 1.09Å | 1.10Å | |
| CN | HN13 | sing | 1.09Å | 1.10Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| CB | HB1 | sing | 1.09Å | 1.10Å | |
| CG | HG2 | sing | 1.09Å | 1.10Å | |
| CG | HG1 | sing | 1.09Å | 1.10Å | |
| NE2 | H11 | sing | 0.97Å | 1.00Å | |
| NE2 | H10 | sing | 0.97Å | 1.00Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CD | CG | CB | 112.4° | 109.5° |
| CG | CD | NE2 | 116.0° | 120.0° |
| CG | CD | OE1 | 121.0° | 120.0° |
| CD | CG | HG2 | 108.7° | 109.5° |
| CD | CG | HG1 | 108.7° | 109.5° |
| CG | CB | CA | 114.8° | 109.5° |
| CG | CB | HB2 | 108.1° | 109.5° |
| CG | CB | HB1 | 108.1° | 109.5° |
| CB | CG | HG2 | 108.8° | 109.5° |
| CB | CG | HG1 | 108.7° | 109.5° |
| NE2 | CD | OE1 | 122.9° | 120.0° |
| CD | NE2 | H11 | 120.0° | 120.0° |
| CD | NE2 | H10 | 120.0° | 120.0° |
| CB | CA | C | 109.2° | 109.4° |
| CB | CA | N | 109.2° | 109.5° |
| CB | CA | HA | 108.7° | 109.5° |
| CA | CB | HB2 | 108.1° | 109.4° |
| CA | CB | HB1 | 108.1° | 109.5° |
| CA | C | O | 119.4° | 120.0° |
| C | CA | N | 111.1° | 109.5° |
| CA | C | OXT | 117.5° | 120.0° |
| C | CA | HA | 108.8° | 109.5° |
| O | C | OXT | 123.1° | 120.0° |
| CA | N | CN | 112.0° | 111.0° |
| CA | N | H | 108.8° | 111.0° |
| N | CA | HA | 109.8° | 109.5° |
| N | CN | HN11 | 109.5° | 109.5° |
| N | CN | HN12 | 109.4° | 109.5° |
| N | CN | HN13 | 109.4° | 109.5° |
| CN | N | H | 108.8° | 111.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| HN11 | CN | HN12 | 109.5° | 109.5° |
| HN11 | CN | HN13 | 109.4° | 109.5° |
| HN12 | CN | HN13 | 109.5° | 109.4° |
| HB2 | CB | HB1 | 109.5° | 109.5° |
| HG2 | CG | HG1 | 109.5° | 109.4° |
| H11 | NE2 | H10 | 120.0° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CD | CG | CB | HG2 | 120.4° | 120.0° |
| CD | CG | CB | HG1 | 120.4° | 120.0° |
| CG | CD | NE2 | OE1 | 179.9° | 180.0° |
| CD | CG | CB | CA | 67.7° | 180.0° |
| CD | CG | CB | HB2 | 53.1° | 60.0° |
| CD | CG | CB | HB1 | 171.5° | 60.0° |
| CD | CG | HG2 | HG1 | 118.7° | 120.0° |
| CG | CD | NE2 | H11 | 179.9° | 0.0° |
| CG | CD | NE2 | H10 | 0.1° | 180.0° |
| CB | CG | CD | NE2 | 158.5° | 180.0° |
| CB | CG | CD | OE1 | 21.5° | 0.0° |
| CG | CB | CA | HB2 | 120.8° | 120.0° |
| CG | CB | CA | HB1 | 120.8° | 120.0° |
| CG | CB | CA | C | 120.5° | 175.0° |
| CG | CB | CA | N | 117.9° | 65.0° |
| CG | CB | CA | HA | 1.9° | 55.0° |
| CG | CB | HB2 | HB1 | 117.6° | 120.1° |
| CB | CG | HG2 | HG1 | 118.7° | 120.0° |
| NE2 | CD | CG | HG2 | 81.1° | 60.0° |
| NE2 | CD | CG | HG1 | 38.1° | 60.0° |
| CD | NE2 | H11 | H10 | 180.0° | 179.9° |
| OE1 | CD | CG | HG2 | 99.0° | 120.0° |
| OE1 | CD | CG | HG1 | 141.9° | 120.0° |
| OE1 | CD | NE2 | H11 | 0.0° | 180.0° |
| OE1 | CD | NE2 | H10 | 180.0° | 0.1° |
| CB | CA | C | N | 120.5° | 120.0° |
| CB | CA | C | HA | 118.5° | 120.0° |
| CB | CA | C | O | 79.4° | 93.8° |
| CB | CA | N | HA | 119.1° | 120.0° |
| CB | CA | N | CN | 48.8° | 153.7° |
| CB | CA | C | OXT | 100.6° | 86.2° |
| CB | CA | N | H | 169.2° | 29.7° |
| CA | CB | HB2 | HB1 | 117.6° | 120.0° |
| CA | CB | CG | HG2 | 171.9° | 60.0° |
| CA | CB | CG | HG1 | 52.7° | 60.0° |
| CA | C | O | OXT | 180.0° | 180.0° |
| C | CA | N | HA | 120.4° | 120.0° |
| C | CA | N | CN | 71.7° | 86.3° |
| C | CA | N | H | 48.7° | 149.7° |
| C | CA | CB | HB2 | 118.7° | 55.0° |
| C | CA | CB | HB1 | 0.3° | 65.0° |
| CA | C | OXT | HXT | 180.0° | 180.0° |
| O | C | CA | N | 41.1° | 26.2° |
| O | C | CA | HA | 162.1° | 146.2° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| CA | N | CN | H | 120.4° | 123.9° |
| N | CA | C | OXT | 138.9° | 153.8° |
| CA | N | CN | HN11 | 180.0° | 55.3° |
| CA | N | CN | HN12 | 60.0° | 175.3° |
| CA | N | CN | HN13 | 60.0° | 64.7° |
| N | CA | CB | HB2 | 2.9° | 175.0° |
| N | CA | CB | HB1 | 121.3° | 55.0° |
| N | CN | HN11 | HN12 | 120.0° | 120.0° |
| N | CN | HN11 | HN13 | 120.0° | 120.0° |
| N | CN | HN12 | HN13 | 120.0° | 120.0° |
| CN | N | CA | HA | 167.9° | 33.7° |
| OXT | C | CA | HA | 17.9° | 33.8° |
| HN11 | CN | HN12 | HN13 | 120.0° | 120.0° |
| HN11 | CN | N | H | 59.6° | 68.7° |
| HN12 | CN | N | H | 179.6° | 51.3° |
| HN13 | CN | N | H | 60.4° | 171.3° |
| H | N | CA | HA | 71.7° | 90.3° |
| HA | CA | CB | HB2 | 122.7° | 65.0° |
| HA | CA | CB | HB1 | 118.9° | 175.0° |
| HB2 | CB | CG | HG2 | 67.3° | 179.9° |
| HB2 | CB | CG | HG1 | 173.5° | 60.0° |
| HB1 | CB | CG | HG2 | 51.1° | 60.0° |
| HB1 | CB | CG | HG1 | 68.0° | 180.0° |
