HIP
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.49Å | |
N | H | sing | 1.01Å | 0.97Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CA | C | sing | 1.51Å | 1.55Å | |
CA | HA | sing | 1.09Å | 1.08Å | |
CB | CG | sing | 1.51Å | 1.51Å | |
CB | HB2 | sing | 1.09Å | 1.08Å | |
CB | HB3 | sing | 1.09Å | 1.07Å | |
CG | CD2 | doub | 1.35Å | 1.37Å | Aromatic |
CG | ND1 | sing | 1.37Å | 1.39Å | Aromatic |
CD2 | NE2 | sing | 1.34Å | 1.38Å | Aromatic |
CD2 | HD2 | sing | 1.08Å | 1.07Å | |
NE2 | CE1 | doub | 1.31Å | 1.33Å | Aromatic |
NE2 | HE2 | sing | 0.97Å | 0.98Å | |
CE1 | ND1 | sing | 1.35Å | 1.35Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
ND1 | P | sing | 1.64Å | 1.48Å | |
P | O1P | doub | 1.48Å | 1.48Å | |
P | O2P | sing | 1.61Å | 1.48Å | |
P | O3P | sing | 1.61Å | 1.48Å | |
O2P | HOP2 | sing | 0.97Å | 0.95Å | |
O3P | HOP3 | sing | 0.97Å | 0.95Å | |
C | O | doub | 1.21Å | 1.22Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 120.1° | 106.7° |
CA | N | H2 | 112.0° | 106.7° |
N | CA | CB | 110.0° | 109.5° |
N | CA | C | 110.1° | 109.4° |
N | CA | HA | 108.0° | 109.5° |
H | N | H2 | 74.2° | 106.7° |
CB | CA | C | 112.5° | 109.5° |
CB | CA | HA | 108.3° | 109.5° |
CA | CB | CG | 112.3° | 109.5° |
CA | CB | HB2 | 108.9° | 109.5° |
CA | CB | HB3 | 108.9° | 109.5° |
C | CA | HA | 107.9° | 109.5° |
CA | C | O | 120.4° | 120.0° |
CA | C | OXT | 118.7° | 120.0° |
CG | CB | HB2 | 109.1° | 109.5° |
CG | CB | HB3 | 108.6° | 109.4° |
CB | CG | CD2 | 132.2° | 126.6° |
CB | CG | ND1 | 121.9° | 126.6° |
HB2 | CB | HB3 | 109.0° | 109.5° |
CD2 | CG | ND1 | 105.9° | 106.8° |
CG | CD2 | NE2 | 109.7° | 108.0° |
CG | CD2 | HD2 | 125.2° | 125.9° |
CG | ND1 | CE1 | 107.0° | 107.3° |
CG | ND1 | P | 125.2° | 126.4° |
NE2 | CD2 | HD2 | 125.1° | 126.0° |
CD2 | NE2 | CE1 | 105.6° | 109.3° |
CD2 | NE2 | HE2 | 127.2° | 125.4° |
CE1 | NE2 | HE2 | 127.2° | 125.4° |
NE2 | CE1 | ND1 | 111.8° | 108.7° |
NE2 | CE1 | HE1 | 124.1° | 125.6° |
ND1 | CE1 | HE1 | 124.1° | 125.7° |
CE1 | ND1 | P | 124.7° | 126.4° |
ND1 | P | O1P | 110.0° | 109.5° |
ND1 | P | O2P | 110.2° | 109.5° |
ND1 | P | O3P | 102.2° | 109.4° |
O1P | P | O2P | 110.2° | 109.5° |
O1P | P | O3P | 111.9° | 109.4° |
O2P | P | O3P | 112.1° | 109.5° |
P | O2P | HOP2 | 110.2° | 106.8° |
P | O3P | HOP3 | 102.2° | 106.7° |
O | C | OXT | 120.9° | 120.0° |
C | OXT | HXT | 118.6° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 106.7° | 113.8° |
N | CA | CB | C | 123.1° | 119.9° |
N | CA | CB | HA | 117.8° | 120.0° |
N | CA | C | HA | 117.6° | 120.0° |
N | CA | CB | CG | 71.1° | 65.1° |
N | CA | CB | HB2 | 49.9° | 55.0° |
N | CA | CB | HB3 | 168.6° | 175.0° |
N | CA | C | O | 35.4° | 20.0° |
N | CA | C | OXT | 147.0° | 160.1° |
H | N | CA | CB | 29.3° | 59.9° |
H | N | CA | C | 95.2° | 60.0° |
H | N | CA | HA | 147.3° | 180.0° |
H2 | N | CA | CB | 54.8° | 53.9° |
H2 | N | CA | C | 179.2° | 173.8° |
H2 | N | CA | HA | 63.2° | 66.2° |
CB | CA | C | HA | 119.4° | 120.0° |
CA | CB | CG | HB2 | 120.8° | 120.1° |
CA | CB | CG | HB3 | 120.4° | 120.0° |
CA | CB | HB2 | HB3 | 118.7° | 120.0° |
CA | CB | CG | CD2 | 53.3° | 85.0° |
CA | CB | CG | ND1 | 128.7° | 95.2° |
CB | CA | C | O | 158.4° | 99.9° |
CB | CA | C | OXT | 23.9° | 80.0° |
C | CA | CB | CG | 52.0° | 175.0° |
C | CA | CB | HB2 | 172.9° | 65.0° |
C | CA | CB | HB3 | 68.3° | 55.1° |
CA | C | O | OXT | 177.6° | 179.9° |
CA | C | OXT | HXT | 180.0° | 180.0° |
HA | CA | CB | CG | 171.2° | 55.0° |
HA | CA | CB | HB2 | 67.9° | 175.0° |
HA | CA | CB | HB3 | 50.9° | 65.0° |
HA | CA | C | O | 82.2° | 140.0° |
HA | CA | C | OXT | 95.5° | 40.1° |
CG | CB | HB2 | HB3 | 118.5° | 120.0° |
CB | CG | CD2 | ND1 | 178.2° | 179.8° |
CB | CG | CD2 | NE2 | 178.3° | 180.0° |
CB | CG | CD2 | HD2 | 1.1° | 0.0° |
CB | CG | ND1 | CE1 | 178.5° | 179.9° |
CB | CG | ND1 | P | 17.6° | 0.1° |
HB2 | CB | CG | CD2 | 67.5° | 35.0° |
HB2 | CB | CG | ND1 | 110.4° | 144.7° |
HB3 | CB | CG | CD2 | 173.7° | 155.0° |
HB3 | CB | CG | ND1 | 8.3° | 24.8° |
CG | CD2 | NE2 | HD2 | 179.3° | 180.0° |
CG | CD2 | NE2 | CE1 | 0.0° | 0.0° |
CG | CD2 | NE2 | HE2 | 180.0° | 180.0° |
CD2 | CG | ND1 | CE1 | 0.1° | 0.3° |
CD2 | CG | ND1 | P | 160.8° | 179.9° |
ND1 | CG | CD2 | NE2 | 0.0° | 0.2° |
ND1 | CG | CD2 | HD2 | 179.3° | 179.8° |
CG | ND1 | CE1 | NE2 | 0.1° | 0.3° |
CG | ND1 | CE1 | P | 161.0° | 179.8° |
CG | ND1 | CE1 | HE1 | 179.9° | 179.8° |
CG | ND1 | P | O1P | 148.8° | 149.6° |
CG | ND1 | P | O2P | 27.0° | 90.3° |
CG | ND1 | P | O3P | 92.2° | 29.7° |
CD2 | NE2 | CE1 | HE2 | 180.0° | 180.0° |
CD2 | NE2 | CE1 | ND1 | 0.1° | 0.2° |
CD2 | NE2 | CE1 | HE1 | 179.9° | 180.0° |
HD2 | CD2 | NE2 | CE1 | 179.3° | 180.0° |
HD2 | CD2 | NE2 | HE2 | 0.6° | 0.0° |
NE2 | CE1 | ND1 | HE1 | 180.0° | 179.8° |
NE2 | CE1 | ND1 | P | 160.9° | 179.9° |
HE2 | NE2 | CE1 | ND1 | 179.9° | 179.8° |
HE2 | NE2 | CE1 | HE1 | 0.1° | 0.1° |
CE1 | ND1 | P | O1P | 8.9° | 30.1° |
CE1 | ND1 | P | O2P | 130.6° | 90.0° |
CE1 | ND1 | P | O3P | 110.1° | 150.0° |
HE1 | CE1 | ND1 | P | 19.1° | 0.1° |
ND1 | P | O1P | O2P | 121.8° | 120.1° |
ND1 | P | O1P | O3P | 112.9° | 119.9° |
ND1 | P | O2P | O3P | 113.1° | 120.0° |
ND1 | P | O2P | HOP2 | 179.9° | 60.0° |
ND1 | P | O3P | HOP3 | 180.0° | 180.0° |
O1P | P | O2P | O3P | 125.3° | 120.0° |
O1P | P | O2P | HOP2 | 58.4° | 180.0° |
O1P | P | O3P | HOP3 | 62.3° | 60.0° |
O2P | P | O3P | HOP3 | 62.0° | 60.0° |
O3P | P | O2P | HOP2 | 66.8° | 60.0° |
O | C | OXT | HXT | 2.3° | 0.1° |