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HHJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2C2sing1.37Å1.36Å
N1C2doub1.32Å1.35Å
N1C6sing1.34Å1.34Å
C2N3sing1.36Å1.36Å
O6C6doub1.22Å1.25Å
C6C5sing1.47Å1.47Å
N3C4sing1.37Å1.36Å
O2'C2'sing1.43Å1.41Å
C5C4doub1.39Å1.47ÅAromatic
C5N7sing1.35Å1.35ÅAromatic
C4N9sing1.36Å1.33ÅAromatic
C20C19doub1.39Å1.40ÅAromatic
C20C21sing1.38Å1.40ÅAromatic
C19C18sing1.37Å1.40ÅAromatic
N7C8doub1.30Å1.36ÅAromatic
N9C8sing1.36Å1.35ÅAromatic
N9C1'sing1.47Å1.46Å
C2'C1'sing1.54Å1.52Å
C2'C3'sing1.55Å1.54Å
C1'O4'sing1.44Å1.40Å
C21C22doub1.39Å1.39ÅAromatic
C18C17doub1.40Å1.40ÅAromatic
O3'C3'sing1.43Å1.43Å
C3'C4'sing1.55Å1.54Å
C22C17sing1.41Å1.39ÅAromatic
C22N23sing1.38Å1.35ÅAromatic
C17C12sing1.46Å1.48ÅAromatic
O4'C4'sing1.44Å1.45Å
C4'C5'sing1.53Å1.50Å
N23C16sing1.37Å1.36ÅAromatic
C12C10sing1.51Å1.52Å
C12C16doub1.34Å1.39ÅAromatic
C10C9sing1.53Å1.53Å
C5'O5'sing1.45Å1.42Å
C9N4sing1.46Å1.45Å
O5'C1sing1.35Å1.44Å
N4C1sing1.35Å1.33Å
C1O2doub1.22Å1.23Å
N2H1sing0.97Å1.00Å
N2H2sing0.97Å1.00Å
N3H3sing0.97Å1.00Å
C8H4sing1.08Å1.08Å
C1'H5sing1.09Å1.10Å
C2'H6sing1.09Å1.10Å
O2'H7sing0.97Å0.95Å
C3'H8sing1.09Å1.10Å
O3'H9sing0.97Å0.95Å
C4'H10sing1.09Å1.10Å
C5'H11sing1.09Å1.10Å
C5'H12sing1.09Å1.10Å
N4H13sing0.97Å1.00Å
C9H14sing1.09Å1.10Å
C9H15sing1.09Å1.10Å
C10H16sing1.09Å1.10Å
C10H17sing1.09Å1.10Å
C16H18sing1.08Å1.08Å
C18H19sing1.08Å1.08Å
C19H20sing1.08Å1.08Å
C20H21sing1.08Å1.08Å
C21H22sing1.08Å1.08Å
N23H23sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C2N1119.3°118.7°
N2C2N3118.2°118.7°
C2N2H1120.0°120.0°
C2N2H2120.0°120.0°
C2N1C6122.7°121.3°
N1C2N3122.5°122.6°
N1C6O6122.3°120.7°
N1C6C5118.0°118.6°
C2N3C4120.4°120.5°
C2N3H3119.8°119.8°
O6C6C5119.7°120.7°
C6C5C4117.0°118.1°
C6C5N7135.7°134.5°
N3C4C5119.3°118.9°
N3C4N9135.1°134.7°
C4N3H3119.8°119.7°
O2'C2'C1'111.8°110.5°
O2'C2'C3'115.0°110.5°
O2'C2'H6110.1°110.6°
C2'O2'H7109.5°114.0°
C4C5N7107.2°107.4°
C5C4N9105.6°106.4°
C5N7C8107.3°109.1°
C4N9C8109.3°107.5°
C4N9C1'126.0°126.2°
C19C20C21121.4°120.6°
C20C19C18119.7°120.6°
C20C19H20120.1°119.7°
C19C20H21119.3°119.7°
C20C21C22119.4°119.8°
C21C20H21119.3°119.7°
C20C21H22120.3°120.1°
C19C18C17118.1°119.8°
C19C18H19120.9°120.1°
C18C19H20120.2°119.7°
N7C8N9110.6°109.6°
N7C8H4124.7°125.2°
C8N9C1'124.5°126.3°
N9C8H4124.7°125.2°
N9C1'C2'111.5°110.4°
N9C1'O4'109.4°110.3°
N9C1'H5110.3°110.3°
C1'C2'C3'102.6°104.1°
C2'C1'O4'105.0°104.9°
C2'C1'H5109.4°110.5°
C1'C2'H6108.6°110.5°
C2'C3'O3'110.4°110.5°
C2'C3'C4'104.0°104.1°
C3'C2'H6108.5°110.5°
C2'C3'H8110.0°110.5°
C1'O4'C4'108.2°105.3°
O4'C1'H5111.2°110.3°
C21C22C17118.7°119.4°
C21C22N23132.9°133.5°
C22C21H22120.3°120.2°
C18C17C22122.7°119.9°
C18C17C12130.7°134.0°
C17C18H19120.9°120.1°
O3'C3'C4'110.5°110.5°
O3'C3'H8111.6°110.6°
C3'O3'H9109.5°114.0°
C3'C4'O4'106.4°104.8°
C3'C4'C5'114.3°110.3°
C4'C3'H8110.1°110.5°
C3'C4'H10108.2°110.4°
C17C22N23108.4°107.2°
C22C17C12106.6°106.1°
C22N23C16111.0°109.9°
C22N23H23124.5°125.1°
C17C12C10127.3°126.6°
C17C12C16104.7°106.9°
O4'C4'C5'110.0°110.4°
O4'C4'H10109.3°110.4°
C4'C5'O5'109.4°109.5°
C5'C4'H10108.6°110.5°
C4'C5'H11109.5°109.5°
C4'C5'H12109.5°109.5°
N23C16C12109.4°110.0°
N23C16H18125.3°125.0°
C16N23H23124.5°125.0°
C10C12C16128.0°126.5°
C12C10C9111.4°109.5°
C12C10H16109.0°109.5°
C12C10H17109.0°109.5°
C12C16H18125.3°125.0°
C10C9N4111.7°109.5°
C10C9H14108.9°109.4°
C10C9H15108.9°109.4°
C9C10H16109.0°109.4°
C9C10H17109.0°109.4°
C5'O5'C1122.4°117.0°
O5'C5'H11109.5°109.5°
O5'C5'H12109.5°109.4°
C9N4C1119.6°120.1°
C9N4H13120.2°120.0°
N4C9H14108.9°109.5°
N4C9H15108.9°109.4°
O5'C1N4115.5°120.1°
O5'C1O2118.1°120.0°
N4C1O2126.4°120.0°
C1N4H13120.2°120.0°
H1N2H2120.0°120.0°
H11C5'H12109.5°109.5°
H14C9H15109.4°109.5°
H16C10H17109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C2N1N3179.7°179.9°
N2C2N1C6179.9°180.0°
N2C2N3C4179.4°180.0°
C2N2H1H2180.0°180.0°
N2C2N3H30.6°0.0°
C2N1C6O6179.5°180.0°
C2N1C6C50.2°0.3°
N1C2N3C40.9°0.0°
N1C2N2H10.0°0.1°
N1C2N2H2180.0°180.0°
N1C2N3H3179.1°180.0°
C6N1C2N30.4°0.0°
N1C6O6C5179.7°179.7°
N1C6C5C40.4°0.6°
N1C6C5N7179.5°179.7°
C2N3C4H3180.0°180.0°
C2N3C4C50.6°0.3°
C2N3C4N9179.2°180.0°
N3C2N2H1179.7°180.0°
N3C2N2H20.3°0.0°
O6C6C5C4179.3°179.8°
O6C6C5N70.2°0.0°
C6C5C4N30.0°0.6°
C6C5C4N7179.3°179.8°
C6C5C4N9179.8°179.6°
C6C5N7C8179.2°180.0°
N3C4C5N9179.8°179.8°
N3C4C5N7179.3°179.6°
N3C4N9C8178.9°179.3°
N3C4N9C1'3.2°0.0°
O2'C2'C1'N982.3°98.6°
O2'C2'C1'C3'123.7°118.7°
O2'C2'C1'H6121.6°122.7°
O2'C2'C3'H6123.7°122.7°
O2'C2'C1'O4'159.4°142.6°
O2'C2'C3'O3'24.1°0.0°
O2'C2'C3'C4'142.7°118.6°
O2'C2'C1'H540.0°23.8°
O2'C2'C3'H899.5°122.7°
C4C5N7C80.0°0.2°
C5C4N9C81.3°0.5°
C5C4N9C1'177.0°179.7°
C5C4N3H3179.4°179.7°
N7C5C4N90.8°0.2°
C5N7C8N90.7°0.5°
C5N7C8H4179.3°179.9°
C4N9C8N71.3°0.6°
C4N9C8C1'175.8°179.3°
C4N9C1'C2'127.2°88.1°
C4N9C1'O4'117.2°156.5°
N9C4N3H30.8°0.1°
C4N9C8H4178.7°179.9°
C4N9C1'H55.4°34.3°
C19C20C21H21180.0°179.9°
C20C19C18H20180.0°179.9°
C19C20C21C220.2°0.1°
C20C19C18C170.3°0.0°
C20C19C18H19179.7°180.0°
C19C20C21H22179.8°180.0°
C21C20C19C180.2°0.0°
C20C21C22H22180.0°179.9°
C20C21C22C170.2°0.1°
C20C21C22N23179.8°179.8°
C21C20C19H20179.8°179.9°
C19C18C17H19180.0°180.0°
C19C18C17C220.4°0.0°
C19C18C17C12180.0°180.0°
C18C19C20H21179.8°179.9°
N7C8N9H4180.0°179.4°
N7C8N9C1'177.1°179.9°
C8N9C1'C2'48.0°91.0°
C8N9C1'O4'67.7°24.4°
C8N9C1'H5169.7°146.6°
N9C1'C2'O4'118.3°118.8°
N9C1'C2'H5122.3°122.3°
N9C1'C2'C3'154.0°142.8°
N9C1'O4'H5122.1°122.2°
N9C1'O4'C4'156.8°159.4°
C1'N9C8H42.9°0.7°
N9C1'C2'H639.3°24.2°
C1'C2'C3'H6114.8°118.6°
C2'C1'O4'H5118.2°118.9°
C1'C2'C3'O3'97.4°118.7°
C1'C2'C3'C4'21.1°0.1°
C2'C1'O4'C4'37.1°40.5°
C1'C2'O2'H7180.0°180.0°
C1'C2'C3'H8139.0°118.6°
C3'C2'C1'O4'35.7°23.9°
C2'C3'O3'C4'114.5°114.6°
C2'C3'O3'H8122.7°122.7°
C2'C3'C4'H8117.9°118.7°
C2'C3'C4'O4'0.5°24.0°
C2'C3'C4'C5'121.0°142.8°
C3'C2'C1'H583.7°94.9°
C3'C2'O2'H763.6°65.4°
C2'C3'O3'H9180.0°61.6°
C2'C3'C4'H10117.9°94.8°
C1'O4'C4'C3'22.9°40.5°
C1'O4'C4'C5'147.1°159.3°
O4'C1'C2'H678.9°94.7°
C1'O4'C4'H1093.8°78.3°
C21C22C17C180.3°0.1°
C21C22C17N23179.6°179.7°
C21C22C17C12179.9°180.0°
C21C22N23C16179.8°179.8°
C22C21C20H21179.8°180.0°
C21C22N23H230.2°0.1°
C18C17C22C12179.7°180.0°
C18C17C22N23180.0°179.8°
C18C17C12C100.1°0.0°
C18C17C12C16180.0°179.7°
C17C18C19H20179.7°180.0°
O3'C3'C4'H8123.7°122.7°
O3'C3'C4'O4'117.9°142.6°
O3'C3'C4'C5'120.5°98.6°
O3'C3'C2'H6147.8°122.7°
O3'C3'C4'H100.5°23.8°
C3'C4'O4'C5'124.2°118.8°
C3'C4'O4'H10116.6°118.8°
C3'C4'C5'H10120.9°122.3°
C3'C4'C5'O5'54.4°178.2°
C4'C3'C2'H693.6°118.7°
C4'C3'O3'H965.5°176.2°
C3'C4'C5'H1165.6°58.2°
C3'C4'C5'H12174.4°61.8°
C17C22N23C160.2°0.1°
C22C17C12C10179.8°180.0°
C22C17C12C160.3°0.3°
C22C17C18H19179.6°180.0°
C17C22C21H22179.7°180.0°
C17C22N23H23179.8°179.8°
N23C22C17C120.3°0.2°
C22N23C16H23180.0°179.9°
C22N23C16C120.0°0.1°
C22N23C16H18180.0°179.8°
N23C22C21H220.2°0.3°
C17C12C16N230.2°0.3°
C17C12C10C16179.9°179.7°
C17C12C10C970.6°84.7°
C17C12C10H1649.7°35.3°
C17C12C10H17169.1°155.4°
C17C12C16H18179.8°179.7°
C12C17C18H190.0°0.0°
O4'C4'C5'H10119.6°122.3°
O4'C4'C5'O5'173.9°66.5°
C4'O4'C1'H581.2°78.4°
O4'C4'C3'H8118.4°94.7°
O4'C4'C5'H1153.9°173.5°
O4'C4'C5'H1266.1°53.5°
C4'C5'O5'H11120.0°120.0°
C4'C5'O5'H12120.0°120.0°
C4'C5'O5'C1162.5°180.0°
C5'C4'C3'H83.2°24.1°
C4'C5'H11H12120.0°120.1°
N23C16C12C10179.9°180.0°
N23C16C12H18180.0°179.9°
C12C10C9H16120.3°120.0°
C12C10C9H17120.3°120.0°
C12C10C9N467.1°180.0°
C12C10C9H1453.2°60.0°
C12C10C9H15172.5°60.0°
C12C10H16H17119.1°120.0°
C10C12C16H180.1°0.0°
C16C12C10C9109.3°95.0°
C16C12C10H16130.4°145.0°
C16C12C10H1711.0°25.0°
C12C16N23H23180.0°180.0°
C10C9N4H14120.3°120.0°
C10C9N4H15120.3°120.0°
C10C9N4C1143.2°180.0°
C10C9N4H1336.7°0.0°
C10C9H14H15119.0°119.9°
C9C10H16H17119.1°119.9°
C5'O5'C1N4158.8°180.0°
C5'O5'C1O222.1°0.0°
O5'C5'C4'H1066.5°55.9°
O5'C5'H11H12120.1°119.9°
C9N4C1O5'8.6°180.0°
C9N4C1H13180.0°180.0°
C9N4C1O2172.4°0.0°
N4C9H14H15119.0°120.0°
N4C9C10H16172.6°60.0°
N4C9C10H1753.2°60.0°
O5'C1N4O2179.0°180.0°
C1O5'C5'H1142.5°59.9°
C1O5'C5'H1277.5°60.0°
O5'C1N4H13171.4°0.0°
C1N4C9H1422.9°60.0°
C1N4C9H1596.4°60.0°
O2C1N4H137.6°180.0°
H5C1'C2'H6161.6°146.5°
H6C2'O2'H759.2°57.3°
H6C2'C3'H824.2°0.0°
H8C3'O3'H957.3°61.2°
H8C3'C4'H10124.2°146.5°
H10C4'C5'H11173.5°64.1°
H10C4'C5'H1253.5°175.8°
H13N4C9H14157.1°120.0°
H13N4C9H1583.6°120.0°
H14C9C10H1667.1°180.0°
H14C9C10H17173.5°60.0°
H15C9C10H1652.2°60.0°
H15C9C10H1767.2°180.0°
H18C16N23H230.0°0.1°
H19C18C19H200.3°0.1°
H20C19C20H210.2°0.0°
H21C20C21H220.2°0.1°

222624

PDB entries from 2024-07-17

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