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Summary Geometry Related PDB entries

HGY

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	CA	sing	1.47Å	1.44Å
CA	OB	sing	1.43Å	1.38Å
CA	C	sing	1.51Å	1.50Å
O	C	doub	1.21Å	1.27Å
C	OXT	sing	1.34Å	1.27Å
OXT	HXT	sing	0.97Å	0.95Å
CA	HA	sing	1.09Å	1.10Å
OB	H3	sing	0.97Å	0.95Å
N	H	sing	1.01Å	1.00Å
N	H2	sing	1.01Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N	CA	OB	111.4°	109.5°
N	CA	C	115.6°	109.4°
N	CA	HA	105.6°	109.5°
CA	N	H	109.5°	111.0°
CA	N	H2	109.4°	110.9°
OB	CA	C	112.1°	109.5°
OB	CA	HA	106.3°	109.5°
CA	OB	H3	109.5°	114.0°
CA	C	O	118.9°	120.0°
CA	C	OXT	119.5°	120.0°
C	CA	HA	105.0°	109.4°
O	C	OXT	121.5°	120.0°
C	OXT	HXT	109.5°	116.9°
H	N	H2	109.5°	111.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N	CA	OB	C	131.3°	119.9°
N	CA	OB	HA	114.6°	120.1°
N	CA	C	HA	115.9°	120.0°
N	CA	C	O	52.4°	110.0°
N	CA	C	OXT	130.9°	70.0°
N	CA	OB	H3	180.0°	60.0°
CA	N	H	H2	120.0°	123.9°
OB	CA	C	HA	114.9°	120.0°
OB	CA	C	O	178.4°	130.0°
OB	CA	C	OXT	1.7°	50.0°
OB	CA	N	H	180.0°	63.9°
OB	CA	N	H2	60.0°	60.1°
CA	C	O	OXT	176.6°	180.0°
CA	C	OXT	HXT	176.6°	180.0°
C	CA	OB	H3	48.7°	60.0°
C	CA	N	H	50.6°	56.1°
C	CA	N	H2	69.4°	180.0°
O	C	OXT	HXT	0.0°	0.1°
O	C	CA	HA	63.5°	10.0°
OXT	C	CA	HA	113.2°	170.0°
HA	CA	OB	H3	65.4°	179.9°
HA	CA	N	H	65.0°	176.0°
HA	CA	N	H2	175.0°	60.0°

223532

PDB entries from 2024-08-07

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