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HGD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1CA1sing1.47Å1.43Å
CA1C1sing1.51Å1.50Å
CA1CB1sing1.53Å1.55Å
C1OE1doub1.21Å1.27Å
C1OE2sing1.34Å1.26Å
CB1CG1sing1.53Å1.54Å
CG1CD1sing1.51Å1.55Å
CD1O1doub1.21Å1.22Å
CD1N2sing1.35Å1.45Å
N2CA2sing1.47Å1.46Å
CA2C2sing1.51Å1.54Å
CA2CB2sing1.53Å1.52Å
C2O2doub1.21Å1.23Å
C2N3sing1.35Å1.45Å
CB2SG2sing1.81Å1.77Å
N3CA3sing1.46Å1.45Å
CA3C3sing1.51Å1.52Å
C3OE3doub1.21Å1.26Å
C3OE4sing1.34Å1.27Å
N4CA4sing1.46Å1.46Å
N4C5sing1.35Å1.46Å
CA4C4sing1.51Å1.54Å
C4OE5doub1.21Å1.26Å
C4OE6sing1.34Å1.26Å
C5O5doub1.21Å1.22Å
C5CA5sing1.51Å1.53Å
CA5N5sing1.47Å1.44Å
CA5CB5sing1.53Å1.54Å
N5CD6sing1.35Å1.44Å
CB5SG5sing1.81Å1.78Å
CA6C6sing1.51Å1.55Å
CA6N6sing1.47Å1.46Å
CA6CB6sing1.53Å1.56Å
C6OE7doub1.21Å1.27Å
C6OE8sing1.34Å1.26Å
CB6CG6sing1.53Å1.55Å
CG6CD6sing1.51Å1.54Å
CD6O6doub1.21Å1.21Å
SG5HG1sing2.35Å2.75Å
HG1SG2sing2.35Å2.75Å
N1H1sing1.01Å1.00Å
N1H2sing1.01Å1.00Å
CA1H4sing1.09Å1.10Å
OE2H5sing0.97Å0.95Å
CB1H6sing1.09Å1.10Å
CB1H7sing1.09Å1.10Å
CG1H8sing1.09Å1.10Å
CG1H9sing1.09Å1.10Å
N2H10sing0.97Å1.00Å
CA2H11sing1.09Å1.10Å
CB2H12sing1.09Å1.10Å
CB2H13sing1.09Å1.10Å
N3H14sing0.97Å1.00Å
CA3H15sing1.09Å1.10Å
CA3H16sing1.09Å1.10Å
OE4H17sing0.97Å0.95Å
N4H18sing0.97Å1.00Å
CA4H19sing1.09Å1.10Å
CA4H20sing1.09Å1.10Å
OE6H21sing0.97Å0.95Å
CA5H22sing1.09Å1.10Å
N5H23sing0.97Å1.00Å
CB5H24sing1.09Å1.10Å
CB5H25sing1.09Å1.10Å
CA6H26sing1.09Å1.10Å
OE8H27sing0.97Å0.95Å
N6H28sing1.01Å1.00Å
N6H29sing1.01Å1.00Å
CB6H31sing1.09Å1.10Å
CB6H32sing1.09Å1.10Å
CG6H33sing1.09Å1.10Å
CG6H34sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1CA1C1110.0°109.5°
N1CA1CB1110.4°109.5°
CA1N1H1109.5°111.1°
CA1N1H2109.4°111.0°
N1CA1H4110.2°109.5°
C1CA1CB1108.3°109.5°
CA1C1OE1120.9°120.0°
CA1C1OE2118.2°120.0°
C1CA1H4109.2°109.4°
CA1CB1CG1115.2°109.5°
CB1CA1H4108.7°109.4°
CA1CB1H6108.0°109.4°
CA1CB1H7108.1°109.5°
OE1C1OE2121.0°119.9°
C1OE2H5109.5°117.1°
CB1CG1CD1108.6°109.4°
CG1CB1H6108.0°109.4°
CG1CB1H7108.0°109.5°
CB1CG1H8109.7°109.5°
CB1CG1H9109.7°109.5°
CG1CD1O1118.2°120.1°
CG1CD1N2120.7°120.0°
CD1CG1H8109.7°109.5°
CD1CG1H9109.7°109.5°
O1CD1N2121.1°119.9°
CD1N2CA2121.6°120.0°
CD1N2H10119.2°119.9°
N2CA2C2114.6°109.5°
N2CA2CB2107.8°109.4°
CA2N2H10119.2°120.1°
N2CA2H11108.3°109.4°
C2CA2CB2110.8°109.5°
CA2C2O2119.9°120.0°
CA2C2N3118.9°120.0°
C2CA2H11107.4°109.5°
CA2CB2SG2104.3°109.5°
CB2CA2H11107.6°109.5°
CA2CB2H12110.8°109.5°
CA2CB2H13110.7°109.5°
O2C2N3121.3°120.0°
C2N3CA3119.0°120.0°
C2N3H14120.5°120.0°
CB2SG2HG1103.5°103.0°
SG2CB2H12110.7°109.4°
SG2CB2H13110.8°109.5°
N3CA3C3111.0°109.5°
CA3N3H14120.5°120.0°
N3CA3H15109.1°109.5°
N3CA3H16109.1°109.5°
CA3C3OE3119.9°120.0°
CA3C3OE4119.0°120.0°
C3CA3H15109.1°109.4°
C3CA3H16109.1°109.5°
OE3C3OE4121.1°120.0°
C3OE4H17109.5°117.0°
CA4N4C5120.1°120.0°
N4CA4C4110.3°109.5°
CA4N4H18120.0°120.0°
N4CA4H19109.3°109.5°
N4CA4H20109.3°109.5°
N4C5O5120.0°120.0°
N4C5CA5119.5°120.0°
C5N4H18120.0°120.0°
CA4C4OE5120.1°120.0°
CA4C4OE6119.5°120.0°
C4CA4H19109.3°109.4°
C4CA4H20109.2°109.5°
OE5C4OE6120.4°120.0°
C4OE6H21109.5°117.0°
O5C5CA5120.6°120.0°
C5CA5N5110.7°109.5°
C5CA5CB5114.6°109.5°
C5CA5H22105.3°109.5°
N5CA5CB5113.7°109.4°
CA5N5CD6117.4°120.0°
N5CA5H22106.3°109.4°
CA5N5H23121.3°120.1°
CA5CB5SG5109.9°109.5°
CB5CA5H22105.3°109.5°
CA5CB5H24109.3°109.5°
CA5CB5H25109.4°109.5°
N5CD6CG6120.6°120.0°
N5CD6O6121.3°119.9°
CD6N5H23121.3°119.9°
CB5SG5HG1104.7°103.0°
SG5CB5H24109.4°109.4°
SG5CB5H25109.3°109.5°
C6CA6N6110.1°109.5°
C6CA6CB6109.6°109.5°
CA6C6OE7120.6°120.0°
CA6C6OE8119.0°120.0°
C6CA6H26108.3°109.4°
N6CA6CB6111.3°109.5°
N6CA6H26109.4°109.5°
CA6N6H28109.5°111.1°
CA6N6H29109.5°111.0°
CA6CB6CG6112.0°109.5°
CB6CA6H26108.1°109.4°
CA6CB6H31108.9°109.4°
CA6CB6H32108.8°109.5°
OE7C6OE8120.5°119.9°
C6OE8H27109.5°117.1°
CB6CG6CD6108.6°109.4°
CG6CB6H31108.8°109.4°
CG6CB6H32108.8°109.5°
CB6CG6H33109.7°109.5°
CB6CG6H34109.7°109.5°
CG6CD6O6118.1°120.1°
CD6CG6H33109.7°109.5°
CD6CG6H34109.7°109.5°
SG5HG1SG2109.9°180.0°
H1N1H2109.5°110.9°
H6CB1H7109.5°109.5°
H8CG1H9109.5°109.5°
H12CB2H13109.5°109.5°
H15CA3H16109.5°109.4°
H19CA4H20109.5°109.4°
H24CB5H25109.5°109.5°
H28N6H29109.5°110.9°
H31CB6H32109.5°109.5°
H33CG6H34109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1CA1C1CB1120.7°120.1°
N1CA1C1H4121.0°120.0°
N1CA1CB1H4120.9°120.0°
N1CA1C1OE17.4°20.0°
N1CA1C1OE2173.3°160.0°
N1CA1CB1CG165.2°64.9°
CA1N1H1H2120.0°123.9°
N1CA1CB1H655.6°55.0°
N1CA1CB1H7173.9°175.0°
C1CA1CB1H4118.6°119.9°
CA1C1OE1OE2179.3°180.0°
C1CA1CB1CG1174.3°175.0°
C1CA1N1H1180.0°63.9°
C1CA1N1H260.0°60.0°
CA1C1OE2H5179.3°180.0°
C1CA1CB1H664.9°65.1°
C1CA1CB1H753.4°55.0°
CB1CA1C1OE1113.3°100.0°
CB1CA1C1OE266.0°80.0°
CA1CB1CG1H6120.8°119.9°
CA1CB1CG1H7120.9°120.0°
CA1CB1CG1CD1154.5°180.0°
CB1CA1N1H160.5°176.1°
CB1CA1N1H2179.5°60.0°
CA1CB1H6H7117.4°120.0°
CA1CB1CG1H834.6°60.1°
CA1CB1CG1H985.6°60.0°
OE1C1CA1H4128.5°140.0°
OE1C1OE2H50.0°0.0°
OE2C1CA1H452.3°40.0°
CB1CG1CD1H8119.9°120.0°
CB1CG1CD1H9119.9°120.0°
CB1CG1CD1O155.1°0.0°
CB1CG1CD1N2124.5°180.0°
CG1CB1CA1H455.7°55.1°
CG1CB1H6H7117.4°120.0°
CB1CG1H8H9120.4°120.0°
CG1CD1O1N2179.6°179.9°
CG1CD1N2CA2178.9°180.0°
CD1CG1CB1H684.7°60.0°
CD1CG1CB1H733.6°60.0°
CD1CG1H8H9120.4°120.0°
CG1CD1N2H101.1°0.0°
O1CD1N2CA20.7°0.1°
O1CD1CG1H864.8°119.9°
O1CD1CG1H9175.0°120.0°
O1CD1N2H10179.3°180.0°
CD1N2CA2H10180.0°179.9°
CD1N2CA2C260.6°85.0°
CD1N2CA2CB263.3°155.0°
N2CD1CG1H8115.6°60.0°
N2CD1CG1H94.6°60.0°
CD1N2CA2H11179.5°35.0°
N2CA2C2CB2122.2°120.0°
N2CA2C2H11120.4°120.0°
N2CA2CB2H11116.6°120.0°
N2CA2C2O285.8°0.0°
N2CA2C2N395.0°180.0°
N2CA2CB2SG247.7°60.0°
N2CA2CB2H1271.4°60.0°
N2CA2CB2H13166.9°180.0°
C2CA2CB2H11117.2°120.0°
CA2C2O2N3179.2°180.0°
C2CA2CB2SG2173.8°180.0°
CA2C2N3CA30.0°180.0°
C2CA2N2H10119.4°95.0°
C2CA2CB2H1254.7°60.0°
C2CA2CB2H1367.0°60.0°
CA2C2N3H14180.0°0.0°
CB2CA2C2O236.4°120.0°
CB2CA2C2N3142.8°60.0°
CA2CB2SG2H12119.2°120.0°
CA2CB2SG2H13119.2°120.0°
CA2CB2SG2HG195.1°75.0°
CB2CA2N2H10116.7°25.0°
CA2CB2H12H13122.4°120.0°
O2C2N3CA3179.2°0.0°
O2C2CA2H11153.8°119.9°
O2C2N3H140.8°180.0°
C2N3CA3H14180.0°180.0°
C2N3CA3C3113.0°180.0°
N3C2CA2H1125.4°60.1°
C2N3CA3H157.3°60.0°
C2N3CA3H16126.8°60.0°
CB2SG2HG1SG519.7°90.0°
SG2CB2CA2H1168.9°60.0°
SG2CB2H12H13122.4°120.0°
N3CA3C3H15120.2°120.0°
N3CA3C3H16120.2°120.1°
N3CA3C3OE3109.3°0.0°
N3CA3C3OE471.0°180.0°
N3CA3H15H16119.3°120.0°
CA3C3OE3OE4179.7°180.0°
C3CA3N3H1467.0°0.0°
C3CA3H15H16119.3°119.9°
CA3C3OE4H17179.7°180.0°
OE3C3CA3H1510.9°120.0°
OE3C3CA3H16130.4°120.1°
OE3C3OE4H170.0°0.0°
OE4C3CA3H15168.8°60.0°
OE4C3CA3H1649.3°59.9°
CA4N4C5H18180.0°180.0°
N4CA4C4H19120.2°120.0°
N4CA4C4H20120.1°120.1°
N4CA4C4OE5165.5°0.0°
N4CA4C4OE614.6°180.0°
CA4N4C5O50.2°0.0°
CA4N4C5CA5179.6°180.0°
N4CA4H19H20119.6°120.0°
C5N4CA4C4168.6°180.0°
N4C5O5CA5179.3°180.0°
N4C5CA5N546.0°180.0°
N4C5CA5CB5176.2°60.0°
C5N4CA4H1948.5°60.0°
C5N4CA4H2071.3°60.0°
N4C5CA5H2268.6°60.1°
CA4C4OE5OE6179.9°180.0°
C4CA4N4H1811.4°0.0°
C4CA4H19H20119.6°119.9°
CA4C4OE6H21179.9°180.0°
OE5C4CA4H1945.3°120.0°
OE5C4CA4H2074.4°120.1°
OE5C4OE6H210.0°0.0°
OE6C4CA4H19134.8°60.0°
OE6C4CA4H20105.5°59.9°
O5C5CA5N5133.4°0.0°
O5C5CA5CB53.1°120.0°
O5C5N4H18179.8°180.0°
O5C5CA5H22112.1°119.9°
C5CA5N5CB5130.7°120.0°
C5CA5N5H22113.9°120.0°
C5CA5CB5H22115.2°120.0°
C5CA5N5CD665.4°85.0°
C5CA5CB5SG570.4°180.0°
CA5C5N4H180.4°0.0°
C5CA5N5H23114.6°95.0°
C5CA5CB5H24169.6°60.0°
C5CA5CB5H2549.7°60.0°
N5CA5CB5H22116.0°120.0°
CA5N5CD6H23180.0°179.9°
N5CA5CB5SG5160.8°60.0°
CA5N5CD6CG6179.6°180.0°
CA5N5CD6O60.8°0.1°
N5CA5CB5H2440.8°60.0°
N5CA5CB5H2579.1°180.0°
CB5CA5N5CD665.3°155.0°
CA5CB5SG5H24120.0°120.0°
CA5CB5SG5H25120.1°120.0°
CA5CB5SG5HG118.3°75.0°
CB5CA5N5H23114.7°25.0°
CA5CB5H24H25119.8°120.0°
N5CD6CG6CB6157.3°180.0°
N5CD6CG6O6179.6°179.9°
CD6N5CA5H22179.3°35.0°
N5CD6CG6H3382.8°60.0°
N5CD6CG6H3437.4°60.0°
CB5SG5HG1SG2176.3°90.0°
SG5CB5CA5H2244.8°60.0°
SG5CB5H24H25119.8°120.0°
C6CA6N6CB6121.8°120.0°
C6CA6N6H26118.9°120.0°
C6CA6CB6H26117.8°119.9°
CA6C6OE7OE8179.3°180.0°
C6CA6CB6CG6103.2°175.0°
CA6C6OE8H27179.3°180.0°
C6CA6N6H28180.0°63.9°
C6CA6N6H2960.0°60.0°
C6CA6CB6H3117.2°65.1°
C6CA6CB6H32136.5°55.0°
N6CA6CB6H26120.2°120.0°
N6CA6C6OE726.3°20.0°
N6CA6C6OE8153.0°160.0°
N6CA6CB6CG618.8°64.9°
CA6N6H28H29120.0°123.9°
N6CA6CB6H31139.2°55.0°
N6CA6CB6H32101.5°175.0°
CB6CA6C6OE7149.1°100.0°
CB6CA6C6OE830.2°80.0°
CA6CB6CG6H31120.4°119.9°
CA6CB6CG6H32120.4°120.0°
CA6CB6CG6CD6140.7°180.0°
CB6CA6N6H2858.3°176.1°
CB6CA6N6H29178.3°60.0°
CA6CB6H31H32118.9°120.0°
CA6CB6CG6H3399.4°60.1°
CA6CB6CG6H3420.8°60.0°
OE7C6CA6H2693.2°140.0°
OE7C6OE8H270.0°0.0°
OE8C6CA6H2687.4°40.0°
CB6CG6CD6H33119.9°120.0°
CB6CG6CD6H34119.9°120.0°
CB6CG6CD6O622.3°0.0°
CG6CB6CA6H26139.0°55.1°
CG6CB6H31H32118.8°120.0°
CB6CG6H33H34120.4°120.0°
CG6CD6N5H230.4°0.0°
CD6CG6CB6H3120.3°60.0°
CD6CG6CB6H3298.9°60.0°
CD6CG6H33H34120.4°120.0°
O6CD6N5H23179.2°180.0°
O6CD6CG6H3397.6°119.9°
O6CD6CG6H34142.2°120.0°
HG1SG5CB5H24101.7°45.0°
HG1SG5CB5H25138.4°165.0°
HG1SG2CB2H12145.7°45.0°
HG1SG2CB2H1324.1°165.0°
H1N1CA1H459.5°56.1°
H2N1CA1H460.5°180.0°
H4CA1CB1H6176.5°175.0°
H4CA1CB1H765.1°65.0°
H6CB1CG1H8155.4°180.0°
H6CB1CG1H935.2°60.0°
H7CB1CG1H886.3°60.0°
H7CB1CG1H9153.5°180.0°
H10N2CA2H110.5°145.0°
H11CA2CB2H12171.9°179.9°
H11CA2CB2H1350.3°60.0°
H14N3CA3H15172.7°119.9°
H14N3CA3H1653.2°120.1°
H18N4CA4H19131.5°119.9°
H18N4CA4H20108.7°120.1°
H22CA5N5H230.7°145.0°
H22CA5CB5H2475.2°179.9°
H22CA5CB5H25164.9°60.0°
H26CA6N6H2861.1°56.1°
H26CA6N6H2958.9°180.0°
H26CA6CB6H31100.6°175.0°
H26CA6CB6H3218.7°65.0°
H31CB6CG6H33140.2°180.0°
H31CB6CG6H3499.5°60.0°
H32CB6CG6H3321.0°60.0°
H32CB6CG6H34141.2°180.0°

226262

PDB entries from 2024-10-16

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