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HGB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.35Å1.23Å
C1O2doub1.21Å1.24Å
C1C2sing1.48Å1.43Å
C3C5doub1.38Å1.41ÅAromatic
C3C2sing1.40Å1.42ÅAromatic
C3HC3sing1.08Å1.08Å
C5C7sing1.38Å1.41ÅAromatic
C5HC5sing1.08Å1.08Å
C7HGsing2.10Å2.04Å
C7C6doub1.38Å1.41ÅAromatic
HGO3sing1.95Å26.72Å
C6C4sing1.38Å1.41ÅAromatic
C6HC6sing1.08Å1.08Å
C4C2doub1.40Å1.42ÅAromatic
C4HC4sing1.08Å1.08Å
O1HO11sing0.97Å0.95Å
O3HO31sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1O2118.9°120.0°
O1C1C2120.5°120.0°
C1O1HO11109.5°120.1°
O2C1C2120.6°120.0°
C1C2C3120.2°120.2°
C1C2C4120.7°120.1°
C5C3C2120.3°119.9°
C5C3HC374.9°120.1°
C3C5C7120.4°120.1°
C3C5HC5120.0°120.0°
C2C3HC3164.7°120.0°
C3C2C4119.1°119.7°
C7C5HC5119.7°119.9°
C5C7HG119.4°119.9°
C5C7C6119.6°120.3°
HGC7C6121.0°119.8°
C7HGO3155.1°179.9°
C7C6C4120.0°120.2°
C7C6HC6164.9°119.9°
HGO3HO3190.0°106.7°
C4C6HC675.0°119.9°
C6C4C2120.5°119.8°
C6C4HC4119.9°120.1°
C2C4HC4119.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1O2C2179.6°180.0°
O1C1C2C3179.6°180.0°
O1C1C2C40.7°0.0°
O2C1C2C30.9°0.0°
O2C1C2C4179.7°180.0°
O2C1O1HO110.0°0.0°
C1C2C3C5179.8°180.0°
C1C2C3C4178.8°180.0°
C1C2C3HC31.2°0.1°
C1C2C4C6179.8°179.8°
C1C2C4HC40.8°0.0°
C2C1O1HO11179.6°180.0°
C5C3C2HC3179.0°179.9°
C3C5C7HC5179.5°179.9°
C3C5C7HG179.7°180.0°
C3C5C7C60.7°0.2°
C5C3C2C40.9°0.0°
C2C3C5C70.8°0.0°
C2C3C5HC5179.7°179.9°
C3C2C4C60.9°0.3°
C3C2C4HC4179.7°180.0°
HC3C3C5C7179.4°179.9°
HC3C3C5HC50.1°0.0°
HC3C3C2C4180.0°180.0°
C5C7HGC6179.6°179.8°
C5C7HGO395.7°0.0°
C5C7C6C40.7°0.4°
C5C7C6HC6179.9°179.9°
HC5C5C7HG0.2°0.1°
HC5C5C7C6179.8°179.7°
HGC7C6C4179.7°179.8°
HGC7C6HC60.3°0.3°
C7HGO3HO3190.0°179.9°
C6C7HGO384.7°179.8°
C7C6C4HC6179.8°179.5°
C7C6C4C20.8°0.5°
C7C6C4HC4179.8°179.8°
C6C4C2HC4179.4°179.7°
HC6C6C4C2179.3°180.0°
HC6C6C4HC40.1°0.3°

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PDB entries from 2024-07-24

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