HGA
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.48Å | |
| N | HN1 | sing | 1.01Å | 1.02Å | |
| N | HN2 | sing | 1.01Å | 1.02Å | |
| CA | CB | sing | 1.53Å | 1.55Å | |
| CA | C | sing | 1.51Å | 1.55Å | |
| CA | HA | sing | 1.09Å | 1.11Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CB | HB1 | sing | 1.09Å | 1.12Å | |
| CB | HB2 | sing | 1.09Å | 1.11Å | |
| CG | CD | sing | 1.51Å | 1.49Å | |
| CG | HG1 | sing | 1.09Å | 1.11Å | |
| CG | HG2 | sing | 1.09Å | 1.12Å | |
| CD | OE1 | doub | 1.21Å | 1.24Å | |
| CD | NE2 | sing | 1.35Å | 1.33Å | |
| NE2 | OZ2 | sing | 1.42Å | 1.45Å | |
| NE2 | HNE | sing | 0.97Å | 1.02Å | |
| OZ2 | HOZ | sing | 0.97Å | 0.95Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.34Å | 1.23Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | HN1 | 105.1° | 106.7° |
| CA | N | HN2 | 113.8° | 106.7° |
| N | CA | CB | 105.1° | 109.5° |
| N | CA | C | 108.2° | 109.5° |
| N | CA | HA | 111.6° | 109.5° |
| HN1 | N | HN2 | 113.9° | 106.6° |
| CB | CA | C | 104.5° | 109.5° |
| CB | CA | HA | 114.8° | 109.5° |
| CA | CB | CG | 111.4° | 109.5° |
| CA | CB | HB1 | 111.5° | 109.4° |
| CA | CB | HB2 | 111.5° | 109.5° |
| C | CA | HA | 112.1° | 109.4° |
| CA | C | O | 114.7° | 120.0° |
| CA | C | OXT | 116.4° | 120.0° |
| CG | CB | HB1 | 111.5° | 109.5° |
| CG | CB | HB2 | 111.5° | 109.4° |
| CB | CG | CD | 109.4° | 109.5° |
| CB | CG | HG1 | 112.2° | 109.5° |
| CB | CG | HG2 | 112.2° | 109.4° |
| HB1 | CB | HB2 | 98.9° | 109.5° |
| CD | CG | HG1 | 112.2° | 109.5° |
| CD | CG | HG2 | 112.2° | 109.5° |
| CG | CD | OE1 | 126.0° | 120.0° |
| CG | CD | NE2 | 120.5° | 120.1° |
| HG1 | CG | HG2 | 98.3° | 109.4° |
| OE1 | CD | NE2 | 113.5° | 119.9° |
| CD | NE2 | OZ2 | 106.7° | 120.0° |
| CD | NE2 | HNE | 123.5° | 120.0° |
| OZ2 | NE2 | HNE | 129.9° | 120.0° |
| NE2 | OZ2 | HOZ | 106.7° | 106.8° |
| O | C | OXT | 129.0° | 120.0° |
| C | OXT | HXT | 116.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | HN1 | HN2 | 125.2° | 113.7° |
| N | CA | CB | C | 113.8° | 120.1° |
| N | CA | CB | HA | 123.0° | 120.0° |
| N | CA | C | HA | 123.4° | 119.9° |
| N | CA | CB | CG | 47.3° | 60.0° |
| N | CA | CB | HB1 | 172.5° | 60.0° |
| N | CA | CB | HB2 | 78.0° | 180.0° |
| N | CA | C | O | 4.7° | 30.0° |
| N | CA | C | OXT | 174.8° | 150.0° |
| HN1 | N | CA | CB | 180.0° | 53.7° |
| HN1 | N | CA | C | 68.8° | 173.8° |
| HN1 | N | CA | HA | 54.9° | 66.3° |
| HN2 | N | CA | CB | 54.7° | 60.0° |
| HN2 | N | CA | C | 165.9° | 60.1° |
| HN2 | N | CA | HA | 70.4° | 180.0° |
| CB | CA | C | HA | 124.9° | 120.0° |
| CA | CB | CG | HB1 | 125.3° | 120.0° |
| CA | CB | CG | HB2 | 125.3° | 120.0° |
| CA | CB | HB1 | HB2 | 117.4° | 120.0° |
| CA | CB | CG | CD | 167.5° | 180.0° |
| CA | CB | CG | HG1 | 67.3° | 60.0° |
| CA | CB | CG | HG2 | 42.3° | 60.0° |
| CB | CA | C | O | 106.9° | 90.0° |
| CB | CA | C | OXT | 73.6° | 90.0° |
| C | CA | CB | CG | 66.5° | 179.9° |
| C | CA | CB | HB1 | 58.7° | 60.0° |
| C | CA | CB | HB2 | 168.2° | 60.0° |
| CA | C | O | OXT | 179.4° | 180.0° |
| CA | C | OXT | HXT | 180.0° | 180.0° |
| HA | CA | CB | CG | 170.3° | 60.0° |
| HA | CA | CB | HB1 | 64.5° | 180.0° |
| HA | CA | CB | HB2 | 45.0° | 60.0° |
| HA | CA | C | O | 128.2° | 150.0° |
| HA | CA | C | OXT | 51.3° | 30.0° |
| CG | CB | HB1 | HB2 | 117.4° | 120.0° |
| CB | CG | CD | HG1 | 125.3° | 120.1° |
| CB | CG | CD | HG2 | 125.2° | 120.0° |
| CB | CG | HG1 | HG2 | 118.2° | 120.0° |
| CB | CG | CD | OE1 | 85.1° | 0.1° |
| CB | CG | CD | NE2 | 95.8° | 180.0° |
| HB1 | CB | CG | CD | 42.2° | 60.0° |
| HB1 | CB | CG | HG1 | 167.5° | 180.0° |
| HB1 | CB | CG | HG2 | 83.0° | 60.0° |
| HB2 | CB | CG | CD | 67.2° | 60.0° |
| HB2 | CB | CG | HG1 | 58.0° | 60.0° |
| HB2 | CB | CG | HG2 | 167.6° | 180.0° |
| CD | CG | HG1 | HG2 | 118.2° | 120.0° |
| CG | CD | OE1 | NE2 | 179.2° | 179.9° |
| CG | CD | NE2 | OZ2 | 148.6° | 179.9° |
| CG | CD | NE2 | HNE | 31.4° | 0.1° |
| HG1 | CG | CD | OE1 | 149.7° | 120.0° |
| HG1 | CG | CD | NE2 | 29.5° | 59.9° |
| HG2 | CG | CD | OE1 | 40.1° | 120.1° |
| HG2 | CG | CD | NE2 | 139.0° | 60.0° |
| OE1 | CD | NE2 | OZ2 | 30.7° | 0.0° |
| OE1 | CD | NE2 | HNE | 149.3° | 180.0° |
| CD | NE2 | OZ2 | HNE | 180.0° | 179.9° |
| CD | NE2 | OZ2 | HOZ | 179.9° | 180.0° |
| HNE | NE2 | OZ2 | HOZ | 0.1° | 0.0° |
| O | C | OXT | HXT | 0.6° | 0.0° |
