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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13O12sing1.43Å1.45Å
C2C3doub1.38Å1.38ÅAromatic
C2C1sing1.40Å1.39ÅAromatic
C3C4sing1.39Å1.39ÅAromatic
O12C10sing1.35Å1.34Å
C8C1sing1.47Å1.47Å
C8C9doub1.35Å1.33Å
C1C6doub1.40Å1.40ÅAromatic
C4O7sing1.36Å1.37Å
C4C5doub1.39Å1.39ÅAromatic
C10C9sing1.42Å1.48Å
C10O11doub1.22Å1.21Å
C6C5sing1.38Å1.39ÅAromatic
C2H1sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C8H5sing1.08Å1.08Å
C9H6sing1.08Å1.08Å
C13H7sing1.09Å1.10Å
C13H8sing1.09Å1.10Å
C13H9sing1.09Å1.10Å
O7H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C13O12C10116.1°117.0°
O12C13H7109.5°109.5°
O12C13H8109.5°109.5°
O12C13H9109.4°109.5°
C3C2C1121.6°119.8°
C2C3C4120.0°120.2°
C3C2H1119.2°120.1°
C2C3H2120.0°119.9°
C2C1C8117.7°120.1°
C2C1C6117.6°119.8°
C1C2H1119.2°120.1°
C3C4O7118.6°119.9°
C3C4C5119.7°120.2°
C4C3H2120.0°119.9°
O12C10C9111.6°119.9°
O12C10O11123.3°120.1°
C1C8C9127.5°120.0°
C8C1C6124.7°120.1°
C1C8H5116.2°120.0°
C8C9C10124.6°120.0°
C9C8H5116.2°120.0°
C8C9H6117.7°120.0°
C1C6C5121.2°119.8°
C1C6H4119.4°120.1°
O7C4C5121.7°119.9°
C4O7H10109.5°113.9°
C4C5C6119.9°120.2°
C4C5H3120.0°119.9°
C9C10O11125.1°120.0°
C10C9H6117.7°120.0°
C6C5H3120.1°119.9°
C5C6H4119.4°120.1°
H7C13H8109.4°109.4°
H7C13H9109.5°109.4°
H8C13H9109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C13O12C10C9161.4°180.0°
C13O12C10O1120.3°0.0°
O12C13H7H8120.0°120.0°
O12C13H7H9120.0°120.0°
O12C13H8H9120.0°120.1°
C3C2C1H1180.0°180.0°
C2C3C4H2180.0°179.9°
C3C2C1C8176.6°179.7°
C3C2C1C61.4°0.0°
C2C3C4O7177.5°180.0°
C2C3C4C50.6°0.0°
C1C2C3C41.0°0.0°
C2C1C8C6177.8°179.8°
C2C1C8C9178.3°0.2°
C2C1C6C51.4°0.0°
C1C2C3H2179.0°179.9°
C2C1C6H4178.6°179.9°
C2C1C8H51.7°179.7°
C3C4O7C5178.1°180.0°
C3C4C5C60.6°0.0°
C4C3C2H1179.0°180.0°
C3C4C5H3179.4°180.0°
C3C4O7H10180.0°90.1°
O12C10C9C81.7°180.0°
O12C10C9O11178.2°180.0°
O12C10C9H6178.3°0.1°
C10O12C13H7180.0°60.0°
C10O12C13H860.0°60.0°
C10O12C13H960.0°180.0°
C1C8C9H5180.0°179.9°
C1C8C9C10177.6°180.0°
C8C1C6C5176.4°179.8°
C8C1C2H13.4°0.2°
C8C1C6H43.6°0.3°
C1C8C9H62.4°0.1°
C9C8C1C60.5°180.0°
C8C9C10H6180.0°179.9°
C8C9C10O11176.5°0.1°
C1C6C5C41.1°0.0°
C1C6C5H4180.0°179.9°
C6C1C2H1178.6°180.0°
C1C6C5H3179.0°180.0°
C6C1C8H5179.6°0.1°
O7C4C5C6177.4°180.0°
O7C4C3H22.5°0.1°
O7C4C5H32.6°0.0°
C4C5C6H3180.0°180.0°
C5C4C3H2179.4°179.9°
C4C5C6H4178.9°180.0°
C5C4O7H102.0°90.0°
C10C9C8H52.4°0.1°
O11C10C9H63.5°179.9°
H1C2C3H21.0°0.1°
H3C5C6H41.1°0.0°
H5C8C9H6177.6°180.0°
H7C13H8H9120.0°119.9°

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PDB entries from 2024-10-09

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