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SummaryGeometryPCM/PTMRelated PDB entries

HF5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OBDHFBsing2.75Å2.20Å
OBDHFDsing2.47Å2.46Å
HFAO00sing2.30Å2.17Å
HFAOABsing2.70Å2.48Å
HFAOACsing2.63Å2.48Å
HFAOADsing2.05Å2.25Å
HFAOAEsing2.54Å2.47Å
HFAOA1sing2.53Å2.52Å
O00HFBsing2.35Å2.23Å
O00HFCsing2.34Å2.22Å
OABHFBsing2.68Å2.49Å
OACHFCsing2.59Å2.56Å
OADHFDsing2.04Å1.92Å
OAEHFEsing2.74Å2.58Å
OA1HA11sing0.87Å0.95Å
HFBOBCsing2.65Å2.44Å
HFBOB1sing2.53Å2.59Å
HFBOB2sing2.53Å2.78Å
HFBOB3sing2.53Å2.67Å
OBCHFCsing2.67Å2.49Å
OB1HB11sing0.87Å0.95Å
OB2HB21sing0.87Å0.95Å
OB3HB31sing0.87Å0.95Å
HFCOCDsing2.48Å2.25Å
HFCOC1sing2.53Å2.54Å
HFCOC2sing2.53Å3.19Å
OCDHFDsing2.48Å2.52Å
OC1HC11sing0.87Å0.95Å
OC2HC21sing0.87Å0.95Å
HFDODEsing2.52Å2.41Å
HFDOD1sing2.53Å2.72Å
HFDOD2sing2.53Å2.68Å
ODEHFEsing2.75Å2.11Å
OD1HD11sing0.87Å0.95Å
OD2HD21sing0.87Å0.95Å
HFEOE1sing2.53Å2.39Å
HFEOE2sing2.53Å2.50Å
HFEOE3sing2.53Å2.46Å
HFEOE4sing2.53Å2.47Å
OE1HE11sing0.87Å0.95Å
OE2HE21sing0.87Å0.95Å
OE3HE31sing0.87Å0.95Å
OE4HE41sing0.87Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
HFBOBDHFD115.6°119.2°
OBDHFBO0096.1°93.1°
OBDHFBOAB94.3°91.2°
OBDHFBOBC84.4°89.5°
OBDHFBOB1158.8°178.7°
OBDHFBOB271.9°89.7°
OBDHFBOB381.8°89.4°
OBDHFDOAD88.7°88.4°
OBDHFDOCD105.2°88.7°
OBDHFDODE172.2°176.1°
OBDHFDOD176.8°91.8°
OBDHFDOD2101.3°90.8°
O00HFAOAB66.4°71.1°
O00HFAOAC73.7°71.6°
O00HFAOAD88.8°86.7°
O00HFAOAE132.3°141.8°
O00HFAOA1111.7°144.1°
HFAO00HFB121.9°117.3°
HFAO00HFC117.0°115.4°
OABHFAOAC139.8°142.7°
OABHFAOAD78.0°86.3°
OABHFAOAE152.5°143.9°
OABHFAOA151.8°73.0°
HFAOABHFB101.2°95.3°
OACHFAOAD96.5°92.3°
OACHFAOAE61.1°72.2°
OACHFAOA1159.9°144.3°
HFAOACHFC95.5°97.4°
OADHFAOAE82.1°82.8°
OADHFAOA1102.8°89.9°
HFAOADHFD122.8°155.9°
OAEHFAOA1116.0°72.7°
HFAOAEHFE126.2°130.9°
HFAOA1HA11109.5°109.5°
HFBO00HFC110.1°116.7°
O00HFBOAB65.3°70.7°
O00HFBOBC76.9°71.6°
O00HFBOB1105.1°88.0°
O00HFBOB2120.2°143.7°
O00HFBOB3130.9°144.2°
O00HFCOAC71.4°71.8°
O00HFCOBC76.0°71.4°
O00HFCOCD109.6°92.0°
O00HFCOC1152.3°143.8°
O00HFCOC2126.4°144.1°
OABHFBOBC141.8°142.3°
OABHFBOB194.0°89.7°
OABHFBOB257.9°73.0°
OABHFBOB3163.5°145.0°
OACHFCOBC145.8°142.9°
OACHFCOCD81.0°86.9°
OACHFCOC1135.3°144.3°
OACHFCOC255.0°72.5°
OADHFDOCD119.4°91.0°
OADHFDODE88.0°87.7°
OADHFDOD1156.0°179.4°
OADHFDOD2106.2°89.5°
OAEHFEODE100.1°93.0°
OAEHFEOE191.3°90.0°
OAEHFEOE273.1°90.0°
OAEHFEOE3159.3°178.5°
OAEHFEOE484.9°88.5°
OBCHFBOB1100.9°90.3°
OBCHFBOB2151.6°144.7°
OBCHFBOB354.1°72.7°
HFBOBCHFC95.2°97.5°
OB1HFBOB296.3°89.7°
OB1HFBOB384.8°89.4°
HFBOB1HB11109.5°109.4°
OB2HFBOB3105.8°72.0°
HFBOB2HB21109.5°109.5°
HFBOB3HB31109.5°109.4°
OBCHFCOCD100.5°89.8°
OBCHFCOC176.3°72.5°
OBCHFCOC2154.3°144.5°
OCDHFCOC174.4°90.0°
OCDHFCOC262.3°90.0°
HFCOCDHFD100.7°127.7°
OC1HFCOC280.4°72.0°
HFCOC1HC11109.5°109.5°
HFCOC2HC21109.5°109.5°
OCDHFDODE82.5°90.5°
OCDHFDOD183.3°89.5°
OCDHFDOD2127.0°179.3°
ODEHFDOD1103.8°92.0°
ODEHFDOD272.9°90.1°
HFDODEHFE129.1°124.4°
OD1HFDOD259.2°90.0°
HFDOD1HD11109.5°109.5°
HFDOD2HD21109.5°109.5°
ODEHFEOE187.8°90.0°
ODEHFEOE286.4°90.0°
ODEHFEOE392.8°88.5°
ODEHFEOE4168.0°178.5°
OE1HFEOE2162.0°180.0°
OE1HFEOE3105.5°90.0°
OE1HFEOE4103.0°90.0°
HFEOE1HE11109.5°109.5°
OE2HFEOE391.7°90.0°
OE2HFEOE484.6°90.0°
HFEOE2HE21109.5°109.4°
OE3HFEOE479.6°90.0°
HFEOE3HE31109.5°109.4°
HFEOE4HE41109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OBDHFBO00HFA71.3°69.3°
OBDHFBOABHFA79.4°77.2°
OBDHFBO00OAB91.9°90.2°
OBDHFBO00OBC82.7°88.5°
OBDHFBO00OB1179.4°179.5°
OBDHFBO00OB272.6°93.7°
OBDHFBO00OB384.4°93.3°
OBDHFBO00HFC71.5°73.8°
OBDHFBOABOBC86.3°90.8°
OBDHFBOABOB1160.5°179.1°
OBDHFBOABOB265.6°89.3°
OBDHFBOABOB375.3°90.6°
HFBOBDHFDOAD57.0°32.0°
OBDHFBOBCOB1159.2°178.7°
OBDHFBOBCOB233.2°88.8°
OBDHFBOBCOB383.9°89.5°
OBDHFBOB1OB254.7°60.0°
OBDHFBOB1OB350.7°12.0°
OBDHFBOB2OB375.6°89.5°
OBDHFBOBCHFC88.3°81.9°
OBDHFBOB1HB11180.0°105.4°
OBDHFBOB2HB21180.0°87.1°
OBDHFBOB3HB31180.0°87.1°
HFBOBDHFDOCD63.1°59.0°
HFBOBDHFDODE122.1°18.4°
HFBOBDHFDOD1142.3°148.5°
HFBOBDHFDOD2163.3°121.5°
OBDHFDOADHFA86.8°73.6°
HFDOBDHFBO002.4°8.4°
HFDOBDHFBOAB63.2°62.4°
OBDHFDOADOCD106.8°88.7°
OBDHFDOADODE172.9°179.1°
OBDHFDOADOD152.4°119.1°
OBDHFDOADOD2101.4°90.8°
HFDOBDHFBOBC78.5°79.9°
HFDOBDHFBOB1175.9°164.6°
HFDOBDHFBOB2117.4°135.4°
HFDOBDHFBOB3132.9°152.6°
OBDHFDOCDHFC49.9°65.1°
OBDHFDOCDODE179.3°176.2°
OBDHFDOCDOD174.3°91.8°
OBDHFDOCDOD2117.3°39.3°
OBDHFDODEOD193.7°166.9°
OBDHFDODEOD242.5°103.1°
OBDHFDOD1OD2111.9°90.8°
OBDHFDODEHFE79.4°35.0°
OBDHFDOD1HD11180.0°92.4°
OBDHFDOD2HD21180.0°91.0°
O00HFAOABOAC8.1°1.2°
O00HFAOABOAD94.0°87.7°
O00HFAOABOAE138.6°160.2°
O00HFAOABOA1148.9°178.7°
O00HFAOACOAD86.8°85.7°
O00HFAOACOAE164.1°167.4°
O00HFAOACOA1108.7°178.7°
O00HFAOADOAE133.0°143.2°
O00HFAOADOA1111.9°144.2°
O00HFAOAEOA1178.5°167.3°
HFAO00HFBHFC142.8°143.1°
O00HFAOABHFB15.7°16.0°
O00HFAOACHFC10.5°13.5°
O00HFAOADHFD38.0°27.8°
O00HFAOAEHFE71.3°77.1°
O00HFAOA1HA11180.0°62.9°
HFAO00HFBOBC154.0°157.8°
HFAO00HFBOB1108.0°111.2°
HFAO00HFBOB21.3°24.4°
HFAO00HFBOB3155.7°162.6°
HFAO00HFCOBC155.9°158.4°
HFAO00HFCOCD59.5°69.3°
HFAO00HFCOC1153.2°162.0°
HFAO00HFCOC29.9°23.4°
OABHFAOACOAD79.1°86.9°
OABHFAOACOAE156.3°168.6°
OABHFAOACOA1116.5°179.9°
OABHFAOADOAE160.8°145.5°
OABHFAOADOA145.8°72.9°
OABHFAOAEOA156.5°18.6°
OABHFAO00HFC161.0°164.3°
OABHFAOACHFC2.8°14.8°
OABHFAOADHFD104.1°99.1°
OABHFAOAEHFE53.7°71.6°
OABHFAOA1HA11149.4°60.8°
HFAOABHFBOBC6.9°13.6°
HFAOABHFBOB1120.1°103.8°
HFAOABHFBOB2144.9°166.4°
HFAOABHFBOB3154.7°167.8°
OACHFAOADOAE59.6°71.8°
OACHFAOADOA1174.6°144.3°
OACHFAOAEOA1157.6°173.1°
OACHFAO00HFB154.0°160.1°
OACHFAOABHFB7.6°17.3°
OACHFAOADHFD35.4°43.6°
OACHFAOAEHFE92.2°96.7°
OACHFAOA1HA1178.0°119.2°
HFAOACHFCOBC8.4°5.6°
HFAOACHFCOCD103.9°79.9°
HFAOACHFCOC1160.8°165.4°
HFAOACHFCOC2166.3°170.9°
OADHFAOAEOA1100.5°92.1°
OADHFAO00HFB56.9°66.5°
OADHFAO00HFC83.6°77.1°
OADHFAOABHFB78.3°71.7°
OADHFAOACHFC76.3°72.2°
OADHFAOAEHFE9.8°1.9°
OADHFAOA1HA1186.2°147.0°
HFAOADHFDOCD20.0°15.1°
HFAOADHFDODE100.3°105.5°
HFAOADHFDOD1139.2°167.4°
HFAOADHFDOD2171.8°164.3°
OAEHFAO00HFB135.1°140.5°
OAEHFAO00HFC5.4°3.2°
OAEHFAOABHFB122.9°144.2°
OAEHFAOACHFC153.6°153.9°
OAEHFAOADHFD95.0°115.4°
OAEHFAOA1HA111.2°130.5°
HFAOAEHFEODE26.8°28.9°
HFAOAEHFEOE1114.8°118.9°
HFAOAEHFEOE256.3°61.1°
HFAOAEHFEOE3100.6°151.6°
HFAOAEHFEOE4142.2°151.1°
OA1HFAO00HFB46.4°18.6°
OA1HFAO00HFC173.1°162.2°
OA1HFAOABHFB164.6°162.7°
OA1HFAOACHFC119.2°165.2°
OA1HFAOADHFD150.0°172.1°
OA1HFAOAEHFE110.2°90.2°
O00HFBOABOBC8.5°2.1°
O00HFBOABOB1104.7°88.0°
O00HFBOABOB2160.4°177.8°
O00HFBOABOB3170.1°176.5°
HFBO00HFCOAC158.2°160.6°
O00HFBOBCOB1103.1°87.8°
O00HFBOBCOB2130.8°177.8°
O00HFBOBCOB3178.4°177.1°
O00HFBOB1OB2123.6°143.7°
O00HFBOB1OB3131.0°144.3°
O00HFBOB2OB3162.2°175.7°
HFBO00HFCOBC11.0°14.6°
O00HFBOB1HB111.8°98.4°
O00HFBOB2HB2193.4°7.7°
O00HFBOB3HB3189.0°178.4°
HFBO00HFCOCD85.4°74.5°
HFBO00HFCOC18.3°18.1°
HFBO00HFCOC2154.8°167.3°
HFCO00HFBOAB163.4°164.0°
O00HFCOACOBC18.8°7.6°
O00HFCOACOCD114.3°93.1°
O00HFCOACOC1171.2°178.7°
O00HFCOACOC2176.7°175.9°
HFCO00HFBOB1109.1°105.7°
HFCO00HFBOB2144.2°167.5°
HFCO00HFBOB312.9°19.5°
O00HFCOBCOCD107.8°92.2°
O00HFCOBCOC1178.7°177.8°
O00HFCOBCOC2153.0°178.1°
O00HFCOCDOC1151.2°143.9°
O00HFCOCDOC2121.6°144.1°
O00HFCOC1OC2166.3°176.7°
O00HFCOCDHFD9.9°9.7°
O00HFCOC1HC11180.0°40.5°
O00HFCOC2HC21180.0°16.0°
OABHFBOBCOB1111.1°89.9°
OABHFBOBCOB2122.9°179.9°
OABHFBOBCOB3173.6°179.1°
OABHFBOB1OB258.1°73.0°
OABHFBOB1OB3163.5°145.0°
OABHFBOB2OB3177.1°179.2°
OABHFBOBCHFC1.4°9.5°
OABHFBOB1HB1167.2°27.7°
OABHFBOB2HB2172.7°4.2°
OABHFBOB3HB31102.9°4.1°
OACHFCOBCHFB8.9°3.9°
OACHFCOBCOCD89.4°84.5°
OACHFCOBCOC1160.4°174.5°
OACHFCOBCOC2134.7°174.2°
OACHFCOCDOC1142.3°144.5°
OACHFCOCDOC255.1°72.5°
OACHFCOC1OC24.6°5.4°
OACHFCOCDHFD76.4°62.0°
OACHFCOC1HC1118.3°137.4°
OACHFCOC2HC21176.1°9.4°
OADHFDOCDHFC47.3°23.3°
OADHFDOCDODE83.4°87.7°
OADHFDOCDOD1171.6°179.7°
OADHFDOCDOD2145.5°127.8°
OADHFDODEOD1158.8°179.5°
OADHFDODEOD2107.6°89.5°
OADHFDOD1OD257.5°28.3°
OADHFDODEHFE14.3°21.4°
OADHFDOD1HD11125.6°26.7°
OADHFDOD2HD2188.1°2.6°
OAEHFEODEHFD25.4°40.1°
OAEHFEODEOE190.9°90.0°
OAEHFEODEOE272.1°90.0°
OAEHFEODEOE3163.6°180.0°
OAEHFEODEOE4113.8°179.9°
OAEHFEOE1OE228.7°8.2°
OAEHFEOE1OE3167.7°178.5°
OAEHFEOE1OE485.1°88.5°
OAEHFEOE2OE3165.7°178.5°
OAEHFEOE2OE486.3°88.5°
OAEHFEOE3OE442.2°0.5°
OAEHFEOE1HE11180.0°94.6°
OAEHFEOE2HE21180.0°94.6°
OAEHFEOE3HE31180.0°48.5°
OAEHFEOE4HE41180.0°95.6°
OBCHFBOB1OB2157.2°144.7°
OBCHFBOB1OB351.9°72.7°
OBCHFBOB2OB340.7°0.7°
OBCHFBOB1HB1177.4°169.9°
OBCHFBOB2HB21145.1°175.9°
OBCHFBOB3HB3191.0°176.8°
HFBOBCHFCOCD98.3°80.6°
HFBOBCHFCOC1169.2°170.6°
HFBOBCHFCOC2143.5°170.3°
OB1HFBOB2OB386.3°89.4°
OB1HFBOBCHFC112.5°99.4°
OB1HFBOB2HB2118.1°94.0°
OB1HFBOB3HB3116.4°92.6°
OB2HFBOBCHFC121.4°170.7°
OB2HFBOB1HB11125.4°45.4°
OB2HFBOB3HB31111.5°2.7°
OB3HFBOBCHFC172.2°171.4°
OB3HFBOB1HB11129.3°117.4°
OB3HFBOB2HB21104.4°176.6°
OBCHFCOCDOC172.4°72.5°
OBCHFCOCDOC2159.6°144.5°
OBCHFCOC1OC2169.0°179.8°
OBCHFCOCDHFD68.9°81.0°
OBCHFCOC1HC11177.3°37.0°
OBCHFCOC2HC2133.1°167.0°
OCDHFCOC1OC263.7°90.0°
OCDHFCOC1HC1177.4°52.8°
OCDHFCOC2HC2185.2°77.4°
HFCOCDHFDODE130.8°111.1°
HFCOCDHFDOD1124.3°156.9°
HFCOCDHFDOD2167.2°104.4°
OC1HFCOCDHFD141.3°153.5°
OC1HFCOC2HC217.8°167.3°
OC2HFCOCDHFD131.5°134.4°
OC2HFCOC1HC1113.7°142.8°
OCDHFDODEOD181.2°89.6°
OCDHFDODEOD2132.4°179.6°
OCDHFDOD1OD2140.7°179.4°
OCDHFDODEHFE105.7°112.4°
OCDHFDOD1HD1172.6°179.0°
OCDHFDOD2HD2161.0°130.4°
ODEHFDOD1OD260.1°90.1°
ODEHFDOD1HD118.0°88.5°
ODEHFDOD2HD215.4°85.1°
HFDODEHFEOE1116.3°130.1°
HFDODEHFEOE246.7°49.9°
HFDODEHFEOE3138.2°139.9°
HFDODEHFEOE488.3°139.8°
OD1HFDODEHFE173.1°158.0°
OD1HFDOD2HD21112.9°177.1°
OD2HFDODEHFE121.9°68.0°
OD2HFDOD1HD1168.1°1.6°
ODEHFEOE1OE271.3°84.9°
ODEHFEOE1OE392.3°88.5°
ODEHFEOE1OE4174.9°178.5°
ODEHFEOE2OE392.7°88.5°
ODEHFEOE2OE4172.0°178.5°
ODEHFEOE3OE4170.7°180.0°
ODEHFEOE1HE1180.0°172.4°
ODEHFEOE2HE2178.4°172.4°
ODEHFEOE3HE3151.5°132.1°
ODEHFEOE4HE4164.8°84.3°
OE1HFEOE2OE3164.2°173.4°
OE1HFEOE2OE4116.5°96.6°
OE1HFEOE3OE4100.8°90.0°
OE1HFEOE2HE21149.8°102.7°
OE1HFEOE3HE3137.0°137.9°
OE1HFEOE4HE4189.9°174.5°
OE2HFEOE3OE484.2°90.0°
OE2HFEOE1HE11151.2°102.7°
OE2HFEOE3HE31138.0°42.1°
OE2HFEOE4HE41106.6°5.6°
OE3HFEOE1HE1112.3°83.9°
OE3HFEOE2HE2114.3°83.9°
OE3HFEOE4HE4113.8°84.5°
OE4HFEOE1HE1194.9°6.1°
OE4HFEOE2HE2193.7°6.1°
OE4HFEOE3HE31137.8°47.9°

259016

PDB entries from 2026-09-02

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