HF4
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O3G | PG | doub | 1.48Å | 1.46Å | |
O2G | PG | sing | 1.61Å | 1.53Å | |
PG | O1G | sing | 1.61Å | 1.49Å | |
PG | O3B | sing | 1.61Å | 1.70Å | |
O2B | PB | doub | 1.48Å | 1.49Å | |
O3B | PB | sing | 1.61Å | 1.66Å | |
PB | O3A | sing | 1.61Å | 1.59Å | |
PB | O1B | sing | 1.61Å | 1.48Å | |
O2' | C2' | sing | 1.43Å | 1.42Å | |
C3' | O3' | sing | 1.43Å | 1.44Å | |
C3' | C2' | sing | 1.55Å | 1.43Å | |
C3' | C4' | sing | 1.54Å | 1.51Å | |
O3A | PA | sing | 1.61Å | 1.64Å | |
C5' | C4' | sing | 1.53Å | 1.52Å | |
C5' | O5' | sing | 1.43Å | 1.44Å | |
C2' | C1' | sing | 1.55Å | 1.50Å | |
C4' | O4' | sing | 1.44Å | 1.46Å | |
O5' | PA | sing | 1.61Å | 1.68Å | |
O2A | PA | doub | 1.48Å | 1.53Å | |
PA | O1A | sing | 1.61Å | 1.45Å | |
C1' | O4' | sing | 1.44Å | 1.49Å | |
C1' | N1 | sing | 1.46Å | 1.43Å | |
C6 | N1 | sing | 1.36Å | 1.45Å | |
C6 | C5 | doub | 1.35Å | 1.44Å | |
N1 | C2 | sing | 1.35Å | 1.41Å | |
C5 | C4 | sing | 1.41Å | 1.44Å | |
C2 | O2 | doub | 1.22Å | 1.42Å | |
C2 | N3 | sing | 1.33Å | 1.45Å | |
C4 | N3 | doub | 1.33Å | 1.38Å | |
C4 | N4 | sing | 1.37Å | 1.43Å | |
C6 | H1 | sing | 1.08Å | 1.08Å | |
N4 | H2 | sing | 0.97Å | 1.00Å | |
N4 | H3 | sing | 0.97Å | 1.00Å | |
C5 | H4 | sing | 1.08Å | 1.08Å | |
O1G | H5 | sing | 0.97Å | 0.95Å | |
O2G | H6 | sing | 0.97Å | 0.95Å | |
O1B | H7 | sing | 0.97Å | 0.95Å | |
O1A | H8 | sing | 0.97Å | 0.95Å | |
C5' | H9 | sing | 1.09Å | 1.10Å | |
C5' | H10 | sing | 1.09Å | 1.10Å | |
C4' | H11 | sing | 1.09Å | 1.10Å | |
C3' | H12 | sing | 1.09Å | 1.10Å | |
O3' | H13 | sing | 0.97Å | 0.95Å | |
C2' | H14 | sing | 1.09Å | 1.10Å | |
O2' | H15 | sing | 0.97Å | 0.95Å | |
C1' | H16 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O3G | PG | O2G | 107.6° | 109.5° |
O3G | PG | O1G | 105.2° | 109.5° |
O3G | PG | O3B | 116.0° | 109.5° |
O2G | PG | O1G | 110.1° | 109.5° |
O2G | PG | O3B | 109.5° | 109.4° |
PG | O2G | H6 | 109.5° | 114.0° |
O1G | PG | O3B | 108.3° | 109.5° |
PG | O1G | H5 | 109.5° | 114.0° |
PG | O3B | PB | 120.6° | 134.0° |
O2B | PB | O3B | 109.9° | 109.4° |
O2B | PB | O3A | 100.7° | 109.5° |
O2B | PB | O1B | 113.1° | 109.5° |
O3B | PB | O3A | 105.2° | 109.5° |
O3B | PB | O1B | 117.0° | 109.5° |
O3A | PB | O1B | 109.4° | 109.5° |
PB | O3A | PA | 120.1° | 134.0° |
PB | O1B | H7 | 109.5° | 114.1° |
O2' | C2' | C3' | 106.2° | 110.9° |
O2' | C2' | C1' | 112.9° | 110.9° |
O2' | C2' | H14 | 111.0° | 110.8° |
C2' | O2' | H15 | 109.5° | 114.0° |
O3' | C3' | C2' | 106.0° | 110.5° |
O3' | C3' | C4' | 113.8° | 110.5° |
O3' | C3' | H12 | 111.2° | 110.4° |
C3' | O3' | H13 | 109.5° | 114.0° |
C2' | C3' | C4' | 104.1° | 104.2° |
C3' | C2' | C1' | 105.9° | 102.1° |
C2' | C3' | H12 | 111.3° | 110.6° |
C3' | C2' | H14 | 110.8° | 110.9° |
C3' | C4' | C5' | 114.0° | 109.9° |
C3' | C4' | O4' | 108.2° | 107.3° |
C3' | C4' | H11 | 109.1° | 110.0° |
C4' | C3' | H12 | 110.2° | 110.5° |
O3A | PA | O5' | 111.1° | 109.5° |
O3A | PA | O2A | 102.8° | 109.5° |
O3A | PA | O1A | 111.2° | 109.4° |
C4' | C5' | O5' | 113.5° | 109.5° |
C5' | C4' | O4' | 106.8° | 109.9° |
C4' | C5' | H9 | 108.5° | 109.4° |
C4' | C5' | H10 | 108.5° | 109.5° |
C5' | C4' | H11 | 109.0° | 109.8° |
C5' | O5' | PA | 121.9° | 122.9° |
O5' | C5' | H9 | 108.5° | 109.5° |
O5' | C5' | H10 | 108.4° | 109.5° |
C2' | C1' | O4' | 107.9° | 103.5° |
C2' | C1' | N1 | 112.6° | 110.6° |
C1' | C2' | H14 | 109.8° | 110.9° |
C2' | C1' | H16 | 107.2° | 110.6° |
C4' | O4' | C1' | 104.6° | 107.0° |
O4' | C4' | H11 | 109.7° | 109.9° |
O5' | PA | O2A | 110.0° | 109.5° |
O5' | PA | O1A | 111.1° | 109.5° |
O2A | PA | O1A | 110.3° | 109.5° |
PA | O1A | H8 | 109.5° | 114.0° |
O4' | C1' | N1 | 113.3° | 110.6° |
O4' | C1' | H16 | 107.4° | 110.6° |
C1' | N1 | C6 | 124.1° | 119.8° |
C1' | N1 | C2 | 116.3° | 119.9° |
N1 | C1' | H16 | 108.1° | 110.7° |
N1 | C6 | C5 | 120.5° | 119.3° |
C6 | N1 | C2 | 119.6° | 120.3° |
N1 | C6 | H1 | 119.7° | 120.4° |
C6 | C5 | C4 | 118.0° | 119.0° |
C5 | C6 | H1 | 119.7° | 120.3° |
C6 | C5 | H4 | 121.0° | 120.6° |
N1 | C2 | O2 | 121.7° | 119.4° |
N1 | C2 | N3 | 119.6° | 121.1° |
C5 | C4 | N3 | 121.5° | 119.6° |
C5 | C4 | N4 | 124.6° | 120.2° |
C4 | C5 | H4 | 121.0° | 120.5° |
O2 | C2 | N3 | 118.5° | 119.4° |
C2 | N3 | C4 | 120.7° | 120.7° |
N3 | C4 | N4 | 113.9° | 120.2° |
C4 | N4 | H2 | 120.0° | 120.0° |
C4 | N4 | H3 | 120.0° | 120.0° |
H2 | N4 | H3 | 120.0° | 120.0° |
H9 | C5' | H10 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3G | PG | O2G | O1G | 114.2° | 120.0° |
O3G | PG | O2G | O3B | 126.8° | 120.0° |
O3G | PG | O1G | O3B | 124.6° | 120.0° |
O3G | PG | O3B | PB | 149.8° | 40.0° |
O3G | PG | O1G | H5 | 0.0° | 60.0° |
O3G | PG | O2G | H6 | 0.0° | 180.0° |
O2G | PG | O1G | O3B | 119.7° | 120.0° |
O2G | PG | O3B | PB | 27.9° | 80.0° |
O2G | PG | O1G | H5 | 115.6° | 60.0° |
O1G | PG | O3B | PB | 92.2° | 160.0° |
O1G | PG | O2G | H6 | 114.2° | 59.9° |
PG | O3B | PB | O2B | 29.9° | 40.0° |
PG | O3B | PB | O3A | 137.6° | 160.0° |
PG | O3B | PB | O1B | 100.9° | 80.0° |
O3B | PG | O1G | H5 | 124.7° | 180.0° |
O3B | PG | O2G | H6 | 126.8° | 60.1° |
O2B | PB | O3B | O3A | 107.6° | 120.0° |
O2B | PB | O3B | O1B | 130.8° | 120.0° |
O2B | PB | O3A | O1B | 119.3° | 120.0° |
O2B | PB | O3A | PA | 172.6° | 45.0° |
O2B | PB | O1B | H7 | 0.0° | 180.0° |
O3B | PB | O3A | O1B | 126.4° | 120.0° |
O3B | PB | O3A | PA | 73.1° | 165.0° |
O3B | PB | O1B | H7 | 129.3° | 60.0° |
PB | O3A | PA | O5' | 49.1° | 160.0° |
PB | O3A | PA | O2A | 166.8° | 40.0° |
PB | O3A | PA | O1A | 75.2° | 80.0° |
O3A | PB | O1B | H7 | 111.3° | 60.0° |
O1B | PB | O3A | PA | 53.3° | 75.0° |
O2' | C2' | C3' | O3' | 149.3° | 143.9° |
O2' | C2' | C3' | C1' | 120.3° | 118.2° |
O2' | C2' | C3' | H14 | 120.7° | 123.6° |
O2' | C2' | C3' | C4' | 90.4° | 97.3° |
O2' | C2' | C1' | H14 | 124.4° | 123.6° |
O2' | C2' | C1' | O4' | 94.1° | 81.2° |
O2' | C2' | C1' | N1 | 31.7° | 37.3° |
O2' | C2' | C3' | H12 | 28.3° | 21.4° |
O2' | C2' | C1' | H16 | 150.5° | 160.3° |
O3' | C3' | C2' | C4' | 120.3° | 118.7° |
O3' | C3' | C2' | H12 | 121.1° | 122.5° |
O3' | C3' | C4' | H12 | 125.7° | 122.5° |
O3' | C3' | C4' | C5' | 155.1° | 119.9° |
O3' | C3' | C2' | C1' | 90.3° | 97.8° |
O3' | C3' | C4' | O4' | 86.2° | 120.7° |
O3' | C3' | C4' | H11 | 33.1° | 1.2° |
O3' | C3' | C2' | H14 | 28.7° | 20.3° |
C2' | C3' | C4' | H12 | 119.4° | 118.8° |
C2' | C3' | C4' | C5' | 90.0° | 121.5° |
C3' | C2' | C1' | H14 | 119.7° | 118.2° |
C2' | C3' | C4' | O4' | 28.7° | 2.0° |
C3' | C2' | C1' | O4' | 21.8° | 37.0° |
C3' | C2' | C1' | N1 | 147.5° | 155.5° |
C2' | C3' | C4' | H11 | 148.0° | 117.5° |
C2' | C3' | O3' | H13 | 180.0° | 61.4° |
C3' | C2' | O2' | H15 | 180.0° | 61.5° |
C3' | C2' | C1' | H16 | 93.6° | 81.5° |
C3' | C4' | C5' | O4' | 119.5° | 117.8° |
C3' | C4' | C5' | H11 | 122.1° | 121.2° |
C3' | C4' | C5' | O5' | 160.3° | 175.7° |
C4' | C3' | C2' | C1' | 30.0° | 20.9° |
C3' | C4' | O4' | H11 | 118.9° | 119.6° |
C3' | C4' | O4' | C1' | 14.9° | 26.5° |
C3' | C4' | C5' | H9 | 79.1° | 64.3° |
C3' | C4' | C5' | H10 | 39.8° | 55.7° |
C4' | C3' | O3' | H13 | 66.3° | 176.2° |
C4' | C3' | C2' | H14 | 149.0° | 139.1° |
O3A | PA | O5' | C5' | 80.9° | 175.0° |
O3A | PA | O5' | O2A | 113.2° | 120.0° |
O3A | PA | O5' | O1A | 124.3° | 120.0° |
O3A | PA | O2A | O1A | 118.6° | 120.0° |
O3A | PA | O1A | H8 | 113.4° | 60.0° |
C4' | C5' | O5' | H9 | 120.6° | 119.9° |
C4' | C5' | O5' | H10 | 120.6° | 120.0° |
C5' | C4' | O4' | H11 | 117.9° | 121.0° |
C4' | C5' | O5' | PA | 83.9° | 180.0° |
C5' | C4' | O4' | C1' | 108.2° | 146.0° |
C4' | C5' | H9 | H10 | 118.2° | 120.0° |
C5' | C4' | C3' | H12 | 29.5° | 2.6° |
O5' | C5' | C4' | O4' | 40.9° | 66.4° |
C5' | O5' | PA | O2A | 32.3° | 55.0° |
C5' | O5' | PA | O1A | 154.7° | 65.0° |
O5' | C5' | H9 | H10 | 118.1° | 120.1° |
O5' | C5' | C4' | H11 | 77.6° | 54.6° |
C2' | C1' | O4' | C4' | 3.7° | 40.1° |
C2' | C1' | O4' | N1 | 125.4° | 118.5° |
C2' | C1' | O4' | H16 | 115.3° | 118.5° |
C2' | C1' | N1 | H16 | 118.3° | 123.0° |
C2' | C1' | N1 | C6 | 84.2° | 115.0° |
C2' | C1' | N1 | C2 | 97.6° | 65.0° |
C1' | C2' | C3' | H12 | 148.6° | 139.6° |
C1' | C2' | O2' | H15 | 64.3° | 174.2° |
C4' | O4' | C1' | N1 | 129.0° | 158.6° |
O4' | C4' | C5' | H9 | 161.5° | 53.5° |
O4' | C4' | C5' | H10 | 79.7° | 173.5° |
O4' | C4' | C3' | H12 | 148.1° | 116.8° |
C4' | O4' | C1' | H16 | 111.7° | 78.4° |
O5' | PA | O2A | O1A | 122.9° | 120.1° |
O5' | PA | O1A | H8 | 122.3° | 60.0° |
PA | O5' | C5' | H9 | 36.7° | 60.1° |
PA | O5' | C5' | H10 | 155.5° | 60.0° |
O2A | PA | O1A | H8 | 0.0° | 180.0° |
O4' | C1' | N1 | H16 | 118.9° | 123.0° |
O4' | C1' | N1 | C6 | 38.6° | 130.9° |
O4' | C1' | N1 | C2 | 139.6° | 49.0° |
C1' | O4' | C4' | H11 | 133.8° | 93.1° |
O4' | C1' | C2' | H14 | 141.5° | 155.2° |
C1' | N1 | C6 | C2 | 178.1° | 179.9° |
C1' | N1 | C6 | C5 | 179.8° | 180.0° |
C1' | N1 | C2 | O2 | 4.0° | 0.1° |
C1' | N1 | C2 | N3 | 179.3° | 180.0° |
C1' | N1 | C6 | H1 | 0.2° | 0.2° |
N1 | C1' | C2' | H14 | 92.8° | 86.3° |
N1 | C6 | C5 | H1 | 180.0° | 179.8° |
N1 | C6 | C5 | C4 | 0.5° | 0.0° |
C6 | N1 | C2 | O2 | 177.8° | 180.0° |
C6 | N1 | C2 | N3 | 2.4° | 0.1° |
N1 | C6 | C5 | H4 | 179.5° | 179.9° |
C6 | N1 | C1' | H16 | 157.5° | 8.0° |
C5 | C6 | N1 | C2 | 1.7° | 0.1° |
C6 | C5 | C4 | H4 | 180.0° | 180.0° |
C6 | C5 | C4 | N3 | 2.1° | 0.1° |
C6 | C5 | C4 | N4 | 179.3° | 180.0° |
N1 | C2 | O2 | N3 | 175.4° | 179.9° |
N1 | C2 | N3 | C4 | 0.9° | 0.1° |
C2 | N1 | C6 | H1 | 178.2° | 179.7° |
C2 | N1 | C1' | H16 | 20.7° | 172.0° |
C5 | C4 | N3 | C2 | 1.5° | 0.1° |
C5 | C4 | N3 | N4 | 177.4° | 179.9° |
C4 | C5 | C6 | H1 | 179.5° | 179.7° |
C5 | C4 | N4 | H2 | 177.4° | 0.0° |
C5 | C4 | N4 | H3 | 2.6° | 180.0° |
O2 | C2 | N3 | C4 | 176.3° | 180.0° |
C2 | N3 | C4 | N4 | 178.9° | 180.0° |
N3 | C4 | N4 | H2 | 0.0° | 179.9° |
N3 | C4 | N4 | H3 | 180.0° | 0.0° |
N3 | C4 | C5 | H4 | 177.8° | 179.9° |
C4 | N4 | H2 | H3 | 180.0° | 180.0° |
N4 | C4 | C5 | H4 | 0.7° | 0.0° |
H1 | C6 | C5 | H4 | 0.5° | 0.3° |
H9 | C5' | C4' | H11 | 43.0° | 174.5° |
H10 | C5' | C4' | H11 | 161.9° | 65.5° |
H11 | C4' | C3' | H12 | 92.6° | 123.7° |
H12 | C3' | O3' | H13 | 58.8° | 61.2° |
H12 | C3' | C2' | H14 | 92.4° | 102.2° |
H14 | C2' | O2' | H15 | 59.4° | 62.2° |
H14 | C2' | C1' | H16 | 26.0° | 36.7° |