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HED

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.43Å1.41Å
C1C2sing1.53Å1.55Å
C1H11sing1.09Å1.11Å
C1H12sing1.09Å1.11Å
O1HO1sing0.97Å0.95Å
C2S3sing1.81Å1.82Å
C2H21sing1.09Å1.11Å
C2H22sing1.09Å1.12Å
S3S4sing2.05Å2.09Å
S4C5sing1.81Å1.84Å
C5C6sing1.53Å1.56Å
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.12Å
C6O6sing1.43Å1.44Å
C6H61sing1.09Å1.12Å
C6H62sing1.09Å1.12Å
O6HO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2103.7°109.5°
O1C1H11114.4°109.5°
O1C1H12114.4°109.5°
C1O1HO1103.7°106.8°
C2C1H11114.4°109.5°
C2C1H12114.4°109.4°
C1C2S3119.4°109.5°
C1C2H21108.6°109.5°
C1C2H22108.6°109.4°
H11C1H1296.1°109.4°
S3C2H21108.6°109.4°
S3C2H22108.6°109.5°
C2S3S4102.6°100.0°
H21C2H22101.4°109.5°
S3S4C5112.8°100.0°
S4C5C6115.7°109.5°
S4C5H51109.9°109.4°
S4C5H52109.9°109.4°
C6C5H51110.0°109.5°
C6C5H52109.9°109.6°
C5C6O6116.0°109.4°
C5C6H61109.8°109.4°
C5C6H62109.8°109.6°
H51C5H52100.3°109.5°
O6C6H61109.9°109.4°
O6C6H62109.9°109.5°
C6O6HO6116.0°106.7°
H61C6H62100.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2H11125.2°120.0°
O1C1C2H12125.3°120.0°
O1C1H11H12120.3°120.0°
O1C1C2S3150.2°180.0°
O1C1C2H2184.5°60.1°
O1C1C2H2225.0°60.0°
C2C1H11H12120.3°120.0°
C2C1O1HO1180.0°179.9°
C1C2S3H21125.3°120.0°
C1C2S3H22125.2°120.0°
C1C2H21H22114.3°120.0°
C1C2S3S4106.4°60.0°
H11C1O1HO154.8°60.0°
H11C1C2S325.0°60.0°
H11C1C2H21150.3°179.9°
H11C1C2H22100.3°60.0°
H12C1O1HO154.7°60.0°
H12C1C2S384.5°60.0°
H12C1C2H2140.7°59.9°
H12C1C2H22150.2°180.0°
S3C2H21H22114.3°120.0°
C2S3S4C573.5°90.0°
H21C2S3S418.8°59.9°
H22C2S3S4128.3°180.0°
S3S4C5C6154.6°60.0°
S3S4C5H5180.1°180.0°
S3S4C5H5229.3°60.0°
S4C5C6H51125.3°120.0°
S4C5C6H52125.2°120.0°
S4C5H51H52115.7°119.9°
S4C5C6O6106.2°180.0°
S4C5C6H61128.4°60.1°
S4C5C6H6219.1°60.0°
C6C5H51H52115.8°120.1°
C5C6O6H61125.3°119.9°
C5C6O6H62125.2°120.1°
C5C6H61H62115.5°120.1°
C5C6O6HO6180.0°179.9°
H51C5C6O619.0°60.1°
H51C5C6H61106.3°180.0°
H51C5C6H62144.3°60.0°
H52C5C6O6128.5°60.0°
H52C5C6H613.2°59.9°
H52C5C6H62106.2°180.0°
O6C6H61H62115.7°120.0°
H61C6O6HO654.7°60.0°
H62C6O6HO654.8°60.0°

246704

PDB entries from 2025-12-24

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